BacMap

Definition	Eubacterium rectale ATCC 33656, complete genome.
Accession	NC_012781
Length	3,449,685

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The map label for this gene is yybJ [H]

Identifier: 238925212

GI number: 238925212

Start: 2746151

End: 2746792

Strand: Reverse

Name: yybJ [H]

Synonym: EUBREC_2866

Alternate gene names: 238925212

Gene position: 2746792-2746151 (Counterclockwise)

Preceding gene: 238925213

Following gene: 238925211

Centisome position: 79.62

GC content: 31.93

Gene sequence:

>642_bases
ATGAATGAATTGGTAATATCTATAAAAAATGCTTATAAAAAATTTGGTGAGCAGGTTGTACTGAATGATGTTTCACTTGA
AATATATAAAGGAAGAATATATGGAATAATAGGTAGAAATGGCAGTGGAAAAACAGTCTTATTTAAAAGCATATGTGGAT
TCATATTATTAGATTCGGGAGAAATAACAGTTTTAGATAAAGTAATTGGCAAAGATGTGGACATGCCTAAAAATGTAGGA
TTGATAATTGAAACACCTGGATTCCTAAAAGACTATTCGGCATATTGGAATTTGAAATTTCTTGCTGATTTAAATAAAAA
AATCACAAATGATGATATAAAGAATGCTATAAGACGAGTAGGGTTAAATCCAGAGGACAAAAAAGCTGTCGGAAAGTATT
CACTTGGAATGAGACAACGACTTGGGATTGCGCAGGCAATAATGGAAAATCCTGATATTTTAGTTTTAGATGAACCTTTT
AATGGGTTGGACAAAAAAGGTGTTACTGAAATGCGCAGTTTATTATTACAGATGAAAGATGAAGGTAAAACCATTATTAT
GGCATCTCATTCTTCTGAGGATATAGATATTTTATGCGATGAGGTATATGAGATGGAGGCTGGAAAGATAGTGAGAGAAT
GA

Upstream 100 bases:

>100_bases
TATATATTGTTACGGTTGAAATACTTGTAATTATTATATTAATTACATATATTTTGAAAAAAGGTAAAAAGTGTACATTG
AATGTATTGGAGATGATTTG

Downstream 100 bases:

>100_bases
ATAAAATACTAGAAGGAAAACTTATTCTTCTTGCAAGTCATAATCCATTAGATATAGATTTATTATGTGATTGCGTCTAT
GAATTAGATGCAGAGACAAT

Product: hypothetical protein

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNELVISIKNAYKKFGEQVVLNDVSLEIYKGRIYGIIGRNGSGKTVLFKSICGFILLDSGEITVLDKVIGKDVDMPKNVG
LIIETPGFLKDYSAYWNLKFLADLNKKITNDDIKNAIRRVGLNPEDKKAVGKYSLGMRQRLGIAQAIMENPDILVLDEPF
NGLDKKGVTEMRSLLLQMKDEGKTIIMASHSSEDIDILCDEVYEMEAGKIVRE

Sequences:

>Translated_213_residues
MNELVISIKNAYKKFGEQVVLNDVSLEIYKGRIYGIIGRNGSGKTVLFKSICGFILLDSGEITVLDKVIGKDVDMPKNVG
LIIETPGFLKDYSAYWNLKFLADLNKKITNDDIKNAIRRVGLNPEDKKAVGKYSLGMRQRLGIAQAIMENPDILVLDEPF
NGLDKKGVTEMRSLLLQMKDEGKTIIMASHSSEDIDILCDEVYEMEAGKIVRE
>Mature_213_residues
MNELVISIKNAYKKFGEQVVLNDVSLEIYKGRIYGIIGRNGSGKTVLFKSICGFILLDSGEITVLDKVIGKDVDMPKNVG
LIIETPGFLKDYSAYWNLKFLADLNKKITNDDIKNAIRRVGLNPEDKKAVGKYSLGMRQRLGIAQAIMENPDILVLDEPF
NGLDKKGVTEMRSLLLQMKDEGKTIIMASHSSEDIDILCDEVYEMEAGKIVRE

Specific function: Part Of A Binding-Protein-Dependent Transport System For Taurine. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI30795238, Length=197, Percent_Identity=29.9492385786802, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI27881501, Length=197, Percent_Identity=29.9492385786802, Blast_Score=88, Evalue=5e-18,
Organism=Homo sapiens, GI31657092, Length=215, Percent_Identity=26.9767441860465, Blast_Score=88, Evalue=5e-18,
Organism=Homo sapiens, GI116734710, Length=209, Percent_Identity=29.1866028708134, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI45446740, Length=202, Percent_Identity=26.2376237623762, Blast_Score=82, Evalue=2e-16,
Organism=Homo sapiens, GI47078218, Length=202, Percent_Identity=26.2376237623762, Blast_Score=82, Evalue=2e-16,
Organism=Homo sapiens, GI21536376, Length=196, Percent_Identity=25.5102040816327, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI150417984, Length=211, Percent_Identity=25.1184834123223, Blast_Score=78, Evalue=5e-15,
Organism=Homo sapiens, GI105990541, Length=183, Percent_Identity=27.3224043715847, Blast_Score=77, Evalue=8e-15,
Organism=Homo sapiens, GI27262624, Length=201, Percent_Identity=26.865671641791, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI27262626, Length=201, Percent_Identity=26.865671641791, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI27436953, Length=213, Percent_Identity=27.2300469483568, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI153792144, Length=216, Percent_Identity=27.3148148148148, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI6005701, Length=213, Percent_Identity=25.3521126760563, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI27477115, Length=213, Percent_Identity=25.8215962441315, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI89111135, Length=205, Percent_Identity=27.8048780487805, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI9961252, Length=189, Percent_Identity=26.984126984127, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI9961250, Length=192, Percent_Identity=26.5625, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI171184400, Length=198, Percent_Identity=28.2828282828283, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI4505771, Length=189, Percent_Identity=26.984126984127, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1786563, Length=209, Percent_Identity=30.1435406698565, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI87081782, Length=219, Percent_Identity=29.6803652968037, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1788761, Length=215, Percent_Identity=30.2325581395349, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790467, Length=211, Percent_Identity=25.5924170616114, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1788225, Length=223, Percent_Identity=27.8026905829596, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI48994943, Length=215, Percent_Identity=27.906976744186, Blast_Score=90, Evalue=9e-20,
Organism=Escherichia coli, GI1789032, Length=241, Percent_Identity=27.8008298755187, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788450, Length=226, Percent_Identity=26.5486725663717, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789593, Length=214, Percent_Identity=25.2336448598131, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87081791, Length=213, Percent_Identity=26.7605633802817, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1786872, Length=218, Percent_Identity=30.2752293577982, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1786398, Length=228, Percent_Identity=27.1929824561404, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1790525, Length=223, Percent_Identity=27.8026905829596, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787712, Length=210, Percent_Identity=26.1904761904762, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787105, Length=219, Percent_Identity=28.7671232876712, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1788165, Length=200, Percent_Identity=30.5, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87082268, Length=222, Percent_Identity=28.8288288288288, Blast_Score=80, Evalue=7e-17,
Organism=Escherichia coli, GI1787029, Length=194, Percent_Identity=27.8350515463918, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1786319, Length=202, Percent_Identity=25.7425742574257, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790739, Length=219, Percent_Identity=23.7442922374429, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787758, Length=217, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788210, Length=217, Percent_Identity=23.0414746543779, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1789873, Length=207, Percent_Identity=28.5024154589372, Blast_Score=74, Evalue=5e-15,
Organism=Escherichia coli, GI1790190, Length=221, Percent_Identity=23.0769230769231, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787370, Length=210, Percent_Identity=24.2857142857143, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081834, Length=227, Percent_Identity=25.1101321585903, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789672, Length=217, Percent_Identity=23.963133640553, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI48995001, Length=206, Percent_Identity=24.7572815533981, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI87081709, Length=211, Percent_Identity=21.3270142180095, Blast_Score=71, Evalue=4e-14,
Organism=Escherichia coli, GI1787164, Length=199, Percent_Identity=25.6281407035176, Blast_Score=71, Evalue=4e-14,
Organism=Escherichia coli, GI1786253, Length=198, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788472, Length=222, Percent_Identity=24.7747747747748, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1786345, Length=226, Percent_Identity=25.2212389380531, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1790162, Length=226, Percent_Identity=26.5486725663717, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786703, Length=226, Percent_Identity=23.8938053097345, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787792, Length=215, Percent_Identity=24.6511627906977, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788506, Length=239, Percent_Identity=25.5230125523013, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787547, Length=233, Percent_Identity=25.7510729613734, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87082267, Length=198, Percent_Identity=24.2424242424242, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787500, Length=215, Percent_Identity=25.1162790697674, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787089, Length=215, Percent_Identity=24.6511627906977, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789991, Length=221, Percent_Identity=25.3393665158371, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787182, Length=235, Percent_Identity=26.3829787234043, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI48994883, Length=218, Percent_Identity=27.0642201834862, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788644, Length=236, Percent_Identity=27.1186440677966, Blast_Score=64, Evalue=5e-12,
Organism=Escherichia coli, GI1788053, Length=197, Percent_Identity=22.8426395939086, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1788897, Length=211, Percent_Identity=24.1706161137441, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1789586, Length=206, Percent_Identity=25.2427184466019, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=212, Percent_Identity=25.9433962264151, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17565586, Length=213, Percent_Identity=26.7605633802817, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71983523, Length=209, Percent_Identity=26.7942583732057, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71983516, Length=209, Percent_Identity=26.7942583732057, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71983510, Length=209, Percent_Identity=26.7942583732057, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115533608, Length=189, Percent_Identity=28.042328042328, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI25146777, Length=219, Percent_Identity=27.8538812785388, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17559834, Length=233, Percent_Identity=27.8969957081545, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193202349, Length=223, Percent_Identity=27.3542600896861, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=206, Percent_Identity=25.2427184466019, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24650853, Length=205, Percent_Identity=30.2439024390244, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24650855, Length=205, Percent_Identity=30.2439024390244, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281362751, Length=206, Percent_Identity=30.0970873786408, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24666092, Length=213, Percent_Identity=28.169014084507, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24643674, Length=206, Percent_Identity=26.2135922330097, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28573573, Length=209, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28573571, Length=209, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28574150, Length=213, Percent_Identity=27.2300469483568, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI116007328, Length=213, Percent_Identity=27.2300469483568, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24648314, Length=210, Percent_Identity=27.1428571428571, Blast_Score=80, Evalue=8e-16,
Organism=Drosophila melanogaster, GI221500365, Length=219, Percent_Identity=22.8310502283105, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI116007184, Length=219, Percent_Identity=22.8310502283105, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI221512771, Length=215, Percent_Identity=26.5116279069767, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24582014, Length=206, Percent_Identity=27.1844660194175, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24582012, Length=206, Percent_Identity=27.1844660194175, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24666836, Length=232, Percent_Identity=28.448275862069, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28574533, Length=224, Percent_Identity=26.7857142857143, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24662800, Length=210, Percent_Identity=30, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI85725262, Length=199, Percent_Identity=28.643216080402, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI19920532, Length=205, Percent_Identity=28.2926829268293, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24580930, Length=205, Percent_Identity=28.2926829268293, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28571209, Length=213, Percent_Identity=23.4741784037559, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI17647959, Length=191, Percent_Identity=27.7486910994764, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28574744, Length=192, Percent_Identity=26.0416666666667, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI85724858, Length=221, Percent_Identity=27.1493212669683, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI85724856, Length=221, Percent_Identity=27.1493212669683, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24580547, Length=221, Percent_Identity=27.1493212669683, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24580551, Length=221, Percent_Identity=27.1493212669683, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24580549, Length=221, Percent_Identity=27.1493212669683, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24580545, Length=221, Percent_Identity=27.1493212669683, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 23820; Mature: 23820

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELVISIKNAYKKFGEQVVLNDVSLEIYKGRIYGIIGRNGSGKTVLFKSICGFILLDSG
CCCEEEHHHHHHHHHCCEEEEECCEEEEEECEEEEEEECCCCCCEEEHHHHHCEEEECCC
EITVLDKVIGKDVDMPKNVGLIIETPGFLKDYSAYWNLKFLADLNKKITNDDIKNAIRRV
CEEEEHHHHCCCCCCCCCCCEEEECCCCHHHHHHHCCCCEEEHHHHHCCCHHHHHHHHHC
GLNPEDKKAVGKYSLGMRQRLGIAQAIMENPDILVLDEPFNGLDKKGVTEMRSLLLQMKD
CCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC
EGKTIIMASHSSEDIDILCDEVYEMEAGKIVRE
CCCEEEEEECCCCCHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MNELVISIKNAYKKFGEQVVLNDVSLEIYKGRIYGIIGRNGSGKTVLFKSICGFILLDSG
CCCEEEHHHHHHHHHCCEEEEECCEEEEEECEEEEEEECCCCCCEEEHHHHHCEEEECCC
EITVLDKVIGKDVDMPKNVGLIIETPGFLKDYSAYWNLKFLADLNKKITNDDIKNAIRRV
CEEEEHHHHCCCCCCCCCCCEEEECCCCHHHHHHHCCCCEEEHHHHHCCCHHHHHHHHHC
GLNPEDKKAVGKYSLGMRQRLGIAQAIMENPDILVLDEPFNGLDKKGVTEMRSLLLQMKD
CCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC
EGKTIIMASHSSEDIDILCDEVYEMEAGKIVRE
CCCEEEEEECCCCCHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1938973; 7584024; 9384377 [H]