BacMap

Definition	Eubacterium rectale ATCC 33656, complete genome.
Accession	NC_012781
Length	3,449,685

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The map label for this gene is yybJ [H]

Identifier: 238925207

GI number: 238925207

Start: 2741082

End: 2741708

Strand: Reverse

Name: yybJ [H]

Synonym: EUBREC_2861

Alternate gene names: 238925207

Gene position: 2741708-2741082 (Counterclockwise)

Preceding gene: 238925208

Following gene: 238925206

Centisome position: 79.48

GC content: 40.67

Gene sequence:

>627_bases
ATGAAGATAGAGATAGAACATGTTTCTAAAAAGATAAAGGATGCTCTGGTACTCGATGATGTATGCATGACACTGGAAAG
TGGTAATATATATGGATTTAAGGGCGTAAACGGCTCCGGCAAGACAATGCTGATGAGAGCGGTAAGCGGACTTATGTATC
CTACAAGCGGTACCATCAGTATCGACGGCAAGGTGCTTGGAAAAAATATGGCTTTTCCGGAAAGGATAGGAATGCTTATT
GAGAATCCTGCCTTTATAGATAGTTATACAGGCTATGACAATCTAAAAATGCTTGCATCAATAAATAAAGGTGAAGTTGA
TATAAGCAGGGCACTTGAAACGGTTGGACTGAACCCACACGATAAGAGAAAGTATAGAAAATATTCTCTTGGAATGAAGC
AGAGACTGGGTATTGCCTGTGCCATTATGGAGGAACCAAAGCTTCTTTTGCTGGATGAACCTTTTAACGCCCTGGACAAG
GAGGGGCAGGAAAAACTGTCAGAAATCATAAGGGATATGCGTGATAAAGGAAGTCTTATACTGCTTAGCTCTCACGATAA
GGATGAGCTTGAAAATCTATCAGATGTAATCTATCTGGTGGACAGCGGAAGGTTTAAATTGAAGTGA

Upstream 100 bases:

>100_bases
ATGCGGCTGCCGGAATAATAAGCTGCATTATTGTGATGGTGGTTTCTATTGTGTCCGGAAGTGTGTATTTTAACAGAAAG
AATATTTTGTGAGGTATTTT

Downstream 100 bases:

>100_bases
CGAGGAGAATTTATTATGAAGCAAAGAAAATCAAAACAAGTAAGGCTTTTTTCGGGAATGCTCATAGGAATTGTGATGAT
TGCTGTTTTGGCAAGGATTG

Product: ABC transporter (ATP-binding protein)

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKIEIEHVSKKIKDALVLDDVCMTLESGNIYGFKGVNGSGKTMLMRAVSGLMYPTSGTISIDGKVLGKNMAFPERIGMLI
ENPAFIDSYTGYDNLKMLASINKGEVDISRALETVGLNPHDKRKYRKYSLGMKQRLGIACAIMEEPKLLLLDEPFNALDK
EGQEKLSEIIRDMRDKGSLILLSSHDKDELENLSDVIYLVDSGRFKLK

Sequences:

>Translated_208_residues
MKIEIEHVSKKIKDALVLDDVCMTLESGNIYGFKGVNGSGKTMLMRAVSGLMYPTSGTISIDGKVLGKNMAFPERIGMLI
ENPAFIDSYTGYDNLKMLASINKGEVDISRALETVGLNPHDKRKYRKYSLGMKQRLGIACAIMEEPKLLLLDEPFNALDK
EGQEKLSEIIRDMRDKGSLILLSSHDKDELENLSDVIYLVDSGRFKLK
>Mature_208_residues
MKIEIEHVSKKIKDALVLDDVCMTLESGNIYGFKGVNGSGKTMLMRAVSGLMYPTSGTISIDGKVLGKNMAFPERIGMLI
ENPAFIDSYTGYDNLKMLASINKGEVDISRALETVGLNPHDKRKYRKYSLGMKQRLGIACAIMEEPKLLLLDEPFNALDK
EGQEKLSEIIRDMRDKGSLILLSSHDKDELENLSDVIYLVDSGRFKLK

Specific function: Part Of The Abc Transporter Complex Cysawtp Involved In Sulfate/Thiosulfate Import. Responsible For Energy Coupling To The Transport System. [C]

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI31657092, Length=198, Percent_Identity=30.8080808080808, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI116734710, Length=210, Percent_Identity=27.6190476190476, Blast_Score=91, Evalue=7e-19,
Organism=Homo sapiens, GI45446740, Length=204, Percent_Identity=27.9411764705882, Blast_Score=90, Evalue=1e-18,
Organism=Homo sapiens, GI47078218, Length=204, Percent_Identity=27.9411764705882, Blast_Score=90, Evalue=1e-18,
Organism=Homo sapiens, GI30795238, Length=201, Percent_Identity=28.3582089552239, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI6005701, Length=202, Percent_Identity=28.2178217821782, Blast_Score=85, Evalue=4e-17,
Organism=Homo sapiens, GI27477115, Length=202, Percent_Identity=27.2277227722772, Blast_Score=85, Evalue=4e-17,
Organism=Homo sapiens, GI21536376, Length=215, Percent_Identity=28.8372093023256, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI105990541, Length=194, Percent_Identity=26.2886597938144, Blast_Score=84, Evalue=6e-17,
Organism=Homo sapiens, GI27881501, Length=201, Percent_Identity=28.3582089552239, Blast_Score=84, Evalue=7e-17,
Organism=Homo sapiens, GI153792144, Length=203, Percent_Identity=25.1231527093596, Blast_Score=81, Evalue=5e-16,
Organism=Homo sapiens, GI150417984, Length=195, Percent_Identity=26.6666666666667, Blast_Score=81, Evalue=5e-16,
Organism=Homo sapiens, GI27262624, Length=209, Percent_Identity=25.3588516746411, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI27262626, Length=209, Percent_Identity=25.3588516746411, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI27436953, Length=217, Percent_Identity=28.110599078341, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI171184400, Length=202, Percent_Identity=26.7326732673267, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI11967969, Length=205, Percent_Identity=25.3658536585366, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI42741659, Length=204, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI4505771, Length=208, Percent_Identity=25, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI9961252, Length=208, Percent_Identity=25, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1788761, Length=213, Percent_Identity=30.0469483568075, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI87081791, Length=210, Percent_Identity=30, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI87081782, Length=182, Percent_Identity=35.1648351648352, Blast_Score=99, Evalue=1e-22,
Organism=Escherichia coli, GI1787712, Length=210, Percent_Identity=29.5238095238095, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1786563, Length=207, Percent_Identity=32.3671497584541, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1786398, Length=200, Percent_Identity=31.5, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI87081709, Length=209, Percent_Identity=28.7081339712919, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI48995001, Length=215, Percent_Identity=28.8372093023256, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786319, Length=214, Percent_Identity=28.5046728971963, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788450, Length=210, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1789032, Length=210, Percent_Identity=30.4761904761905, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1790467, Length=208, Percent_Identity=27.4038461538462, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1788225, Length=218, Percent_Identity=27.0642201834862, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1787029, Length=214, Percent_Identity=28.5046728971963, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1789873, Length=195, Percent_Identity=30.2564102564103, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1787370, Length=196, Percent_Identity=27.5510204081633, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788210, Length=210, Percent_Identity=24.7619047619048, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786698, Length=205, Percent_Identity=29.2682926829268, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789991, Length=217, Percent_Identity=28.110599078341, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI48994943, Length=211, Percent_Identity=26.5402843601896, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI87081834, Length=183, Percent_Identity=28.9617486338798, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788165, Length=187, Percent_Identity=32.0855614973262, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1787164, Length=201, Percent_Identity=28.8557213930348, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790525, Length=208, Percent_Identity=28.8461538461538, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1786872, Length=213, Percent_Identity=26.7605633802817, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1789891, Length=212, Percent_Identity=30.6603773584906, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786345, Length=210, Percent_Identity=27.1428571428571, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788506, Length=215, Percent_Identity=27.4418604651163, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789593, Length=209, Percent_Identity=29.1866028708134, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1789672, Length=212, Percent_Identity=26.8867924528302, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786253, Length=197, Percent_Identity=26.3959390862944, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787089, Length=198, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787500, Length=216, Percent_Identity=30.0925925925926, Blast_Score=68, Evalue=3e-13,
Organism=Escherichia coli, GI1789890, Length=218, Percent_Identity=26.605504587156, Blast_Score=68, Evalue=3e-13,
Organism=Escherichia coli, GI1786803, Length=185, Percent_Identity=26.4864864864865, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1787105, Length=196, Percent_Identity=26.0204081632653, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI87082268, Length=212, Percent_Identity=26.8867924528302, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790739, Length=214, Percent_Identity=23.8317757009346, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1790162, Length=213, Percent_Identity=25.3521126760563, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786654, Length=201, Percent_Identity=26.865671641791, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI48994883, Length=215, Percent_Identity=26.046511627907, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1788897, Length=212, Percent_Identity=23.5849056603774, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1788472, Length=215, Percent_Identity=22.3255813953488, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1790544, Length=216, Percent_Identity=25, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1788053, Length=201, Percent_Identity=23.8805970149254, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786703, Length=201, Percent_Identity=24.8756218905473, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1789586, Length=212, Percent_Identity=26.4150943396226, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI1786981, Length=191, Percent_Identity=33.5078534031414, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=203, Percent_Identity=26.6009852216749, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71983510, Length=203, Percent_Identity=26.6009852216749, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71983523, Length=203, Percent_Identity=26.6009852216749, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17565586, Length=188, Percent_Identity=29.7872340425532, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI115533608, Length=202, Percent_Identity=25.7425742574257, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17510237, Length=191, Percent_Identity=26.1780104712042, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193202349, Length=204, Percent_Identity=28.921568627451, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17511077, Length=220, Percent_Identity=30.4545454545455, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71992290, Length=204, Percent_Identity=26.9607843137255, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17565938, Length=193, Percent_Identity=24.8704663212435, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=219, Percent_Identity=25.1141552511416, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24643674, Length=208, Percent_Identity=27.8846153846154, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28574150, Length=214, Percent_Identity=27.5700934579439, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI221512771, Length=204, Percent_Identity=27.9411764705882, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI116007328, Length=214, Percent_Identity=27.5700934579439, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24666092, Length=210, Percent_Identity=26.6666666666667, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI28573573, Length=205, Percent_Identity=27.8048780487805, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI28573571, Length=205, Percent_Identity=27.8048780487805, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI221500365, Length=208, Percent_Identity=22.5961538461538, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007184, Length=208, Percent_Identity=22.5961538461538, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24648314, Length=208, Percent_Identity=25.4807692307692, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24641565, Length=205, Percent_Identity=27.8048780487805, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI85725262, Length=181, Percent_Identity=28.1767955801105, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574533, Length=201, Percent_Identity=26.3681592039801, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581191, Length=209, Percent_Identity=26.7942583732057, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24581189, Length=209, Percent_Identity=26.7942583732057, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24581193, Length=209, Percent_Identity=26.7942583732057, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24581195, Length=209, Percent_Identity=26.7942583732057, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24650853, Length=158, Percent_Identity=31.0126582278481, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24650855, Length=158, Percent_Identity=31.0126582278481, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24582014, Length=193, Percent_Identity=26.4248704663212, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24582012, Length=193, Percent_Identity=26.4248704663212, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281362751, Length=214, Percent_Identity=27.5700934579439, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281363262, Length=203, Percent_Identity=24.6305418719212, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24653245, Length=203, Percent_Identity=24.6305418719212, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: 3.6.3.25 [C]

Molecular weight: Translated: 23222; Mature: 23222

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEIEHVSKKIKDALVLDDVCMTLESGNIYGFKGVNGSGKTMLMRAVSGLMYPTSGTIS
CEEEHHHHHHHHHHHHHHHHHHHEEECCCEEEECCCCCCCHHHHHHHHHHCCCCCCCEEE
IDGKVLGKNMAFPERIGMLIENPAFIDSYTGYDNLKMLASINKGEVDISRALETVGLNPH
ECCEEECCCCCCHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCC
DKRKYRKYSLGMKQRLGIACAIMEEPKLLLLDEPFNALDKEGQEKLSEIIRDMRDKGSLI
HHHHHHHHHCCHHHHCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEE
LLSSHDKDELENLSDVIYLVDSGRFKLK
EEECCCHHHHHHHHHEEEEEECCCEECC
>Mature Secondary Structure
MKIEIEHVSKKIKDALVLDDVCMTLESGNIYGFKGVNGSGKTMLMRAVSGLMYPTSGTIS
CEEEHHHHHHHHHHHHHHHHHHHEEECCCEEEECCCCCCCHHHHHHHHHHCCCCCCCEEE
IDGKVLGKNMAFPERIGMLIENPAFIDSYTGYDNLKMLASINKGEVDISRALETVGLNPH
ECCEEECCCCCCHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCC
DKRKYRKYSLGMKQRLGIACAIMEEPKLLLLDEPFNALDKEGQEKLSEIIRDMRDKGSLI
HHHHHHHHHCCHHHHCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEE
LLSSHDKDELENLSDVIYLVDSGRFKLK
EEECCCHHHHHHHHHEEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1938973; 7584024; 9384377 [H]