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The map label for this gene is traA [H]

Identifier: 238925052

GI number: 238925052

Start: 2573928

End: 2575508

Strand: Direct

Name: traA [H]

Synonym: EUBREC_2704

Alternate gene names: 238925052

Gene position: 2573928-2575508 (Clockwise)

Preceding gene: 238925050

Following gene: 238925053

Centisome position: 74.61

GC content: 53.13

Gene sequence:

>1581_bases
ATGCCCTGTCCACACAACGAAATCTCGATTGTGCAGCGAAGCCAACAGCAGTCTGCGGTTGCCGCCGCTGCCTACCAGAG
CGGCGAAAAGCTGTTCTGTGGATACGATCAGGAAGTGAAGCACTACCCGGAAAAGCGTGGTATCGTCCACAATGAAATCT
TGCTTCCGGCAAATGCCCCACGGTCGTATGCAGACCGCAATACTTTATGGAACGCCGCCGAAGCGGTGGAGAAGCAATGG
AATTCCCAGCTTGCAAGGCGGTGGGTGCTTACCATCCCCAGAGAGATACCGCCCGACCAGTACGCTGTCCTTGTCCGGGA
GTTTTGTGAGCAGCAGTTTGTTTCCAAAGGGATGATTGTTGACTTTGCCATCCATGACCCCCACCCGCCGGGACACAATC
CCCACGCCCATGTCCTGCTGACTATGAGGGCAATGGACGAGCATGGGAAATGGCTTCCAAAGAGCCGCAAGGTTTATGAC
CTTGACGAGAATGGGGAACGGATAAAGCTGCCATCCGGCAGGTGGAAAAGCCACAAGGAGGATACAGTTGACTGGAACGA
CCAGAAGTATTGTGAAATCTGGCGGCATGAATGGGAGGTCATCCAGAACCGCTATCTGGAAGCCAATGACCGTCCGGAGC
GTGTGGACTTGCGTTCCTATGCCAGACAGGGGCTTGATATTGTCCCCACTGTCCATGAGGGGGCTGCTGTCCGGCAGATG
GAAAAGCGTGGTATCCAGACGAATATCGGCAACCTGAACCGGGAAATCAGAGCCGCCAACAGCTTAATGCAGTCCATCCG
GCAGCTTATCCAAAACCTCAAAGGCTGGATTACCGAGCTGGGCGAAAAGCGGAAGGAACTGCTTGCACAAAAAGCGGCGG
AAGAAGCGACGCTTCTTCCCAATCTTCTGATGAAATATATGGAGATACGAAAGGTAGAACGGAAGGACTGGACGAGGGCT
GGGCAGAACCGGGGGACTTCCAAAGACTTAAAGGCAGTCAGCGAAGCTCTGTCCTATCTCCGGCAAAAGGGGCTTTCCAC
TGTGGAGGACTTGGAAGCCTTTCTGGAATCTTCCGGGAAATCAGCCGCAGATTACCGCAATCAGATGAAGCCAAAGGAAG
CCCGCAGCAAAGTGATTGACGGGATTCTTGCCAGCCGGACAGACTGCAAAGAATGTAAGCCTGTCTATGAGAAGTACCAG
AAGATATTTTTTAAGAAAACAAAGGAGAAATTCAAACAGGAACACCCGGAGGTTGCCCGGTATGAGAAAGCCGCCGCCTA
CCTTGCCAAGCACCCGGACGATAAGGACAGCACCCAAAAGGAGCTACAAGAGGAGCAGGAAACGCTTCTCAGCGACATCG
CAGAGCTGAAAGTACCACTGACCGAGGTGCAGGAGGATTTGAAGAAGCTGCGGGACATCCGCTACTGGGTACGGAAAGCC
ACACCCGGCACAGAGGAAAGTAAAGAGCCGCCCAAGAAACAGCCTATCAAAGAAGTCTTGCAGGATAAGGCGGACGAGAA
AAAAGCACAAAGAACCGCCCCGGCGCAGACGAAACACAGACAACAGGATATGGAACTTTAA

Upstream 100 bases:

>100_bases
CCGAGCAGGAAATCTGAAAAGGTCTCCTGCTTTTTTTCTGCCCCAAATGAGGTGGTAAAACGCCACCCCATCCACCAATT
ACCGAAAGGAGGGACACGAA

Downstream 100 bases:

>100_bases
CAGACACTTGCCATTTTCAATCAGAGAATGTCAGGTGCTTTTTCTTTTTAAGGAGGGATAGATTTGAATGTATTTGAAGC
TGTGAAGCAGTCCGTCACAA

Product: putative conjugal transfer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MPCPHNEISIVQRSQQQSAVAAAAYQSGEKLFCGYDQEVKHYPEKRGIVHNEILLPANAPRSYADRNTLWNAAEAVEKQW
NSQLARRWVLTIPREIPPDQYAVLVREFCEQQFVSKGMIVDFAIHDPHPPGHNPHAHVLLTMRAMDEHGKWLPKSRKVYD
LDENGERIKLPSGRWKSHKEDTVDWNDQKYCEIWRHEWEVIQNRYLEANDRPERVDLRSYARQGLDIVPTVHEGAAVRQM
EKRGIQTNIGNLNREIRAANSLMQSIRQLIQNLKGWITELGEKRKELLAQKAAEEATLLPNLLMKYMEIRKVERKDWTRA
GQNRGTSKDLKAVSEALSYLRQKGLSTVEDLEAFLESSGKSAADYRNQMKPKEARSKVIDGILASRTDCKECKPVYEKYQ
KIFFKKTKEKFKQEHPEVARYEKAAAYLAKHPDDKDSTQKELQEEQETLLSDIAELKVPLTEVQEDLKKLRDIRYWVRKA
TPGTEESKEPPKKQPIKEVLQDKADEKKAQRTAPAQTKHRQQDMEL

Sequences:

>Translated_526_residues
MPCPHNEISIVQRSQQQSAVAAAAYQSGEKLFCGYDQEVKHYPEKRGIVHNEILLPANAPRSYADRNTLWNAAEAVEKQW
NSQLARRWVLTIPREIPPDQYAVLVREFCEQQFVSKGMIVDFAIHDPHPPGHNPHAHVLLTMRAMDEHGKWLPKSRKVYD
LDENGERIKLPSGRWKSHKEDTVDWNDQKYCEIWRHEWEVIQNRYLEANDRPERVDLRSYARQGLDIVPTVHEGAAVRQM
EKRGIQTNIGNLNREIRAANSLMQSIRQLIQNLKGWITELGEKRKELLAQKAAEEATLLPNLLMKYMEIRKVERKDWTRA
GQNRGTSKDLKAVSEALSYLRQKGLSTVEDLEAFLESSGKSAADYRNQMKPKEARSKVIDGILASRTDCKECKPVYEKYQ
KIFFKKTKEKFKQEHPEVARYEKAAAYLAKHPDDKDSTQKELQEEQETLLSDIAELKVPLTEVQEDLKKLRDIRYWVRKA
TPGTEESKEPPKKQPIKEVLQDKADEKKAQRTAPAQTKHRQQDMEL
>Mature_525_residues
PCPHNEISIVQRSQQQSAVAAAAYQSGEKLFCGYDQEVKHYPEKRGIVHNEILLPANAPRSYADRNTLWNAAEAVEKQWN
SQLARRWVLTIPREIPPDQYAVLVREFCEQQFVSKGMIVDFAIHDPHPPGHNPHAHVLLTMRAMDEHGKWLPKSRKVYDL
DENGERIKLPSGRWKSHKEDTVDWNDQKYCEIWRHEWEVIQNRYLEANDRPERVDLRSYARQGLDIVPTVHEGAAVRQME
KRGIQTNIGNLNREIRAANSLMQSIRQLIQNLKGWITELGEKRKELLAQKAAEEATLLPNLLMKYMEIRKVERKDWTRAG
QNRGTSKDLKAVSEALSYLRQKGLSTVEDLEAFLESSGKSAADYRNQMKPKEARSKVIDGILASRTDCKECKPVYEKYQK
IFFKKTKEKFKQEHPEVARYEKAAAYLAKHPDDKDSTQKELQEEQETLLSDIAELKVPLTEVQEDLKKLRDIRYWVRKAT
PGTEESKEPPKKQPIKEVLQDKADEKKAQRTAPAQTKHRQQDMEL

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mobA/mobL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000606
- InterPro:   IPR005053
- InterPro:   IPR014136 [H]

Pfam domain/function: PF03389 MobA_MobL; PF01443 Viral_helicase1 [H]

EC number: NA

Molecular weight: Translated: 61071; Mature: 60940

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCPHNEISIVQRSQQQSAVAAAAYQSGEKLFCGYDQEVKHYPEKRGIVHNEILLPANAP
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHCHHHCCCCCCCEEECCCCC
RSYADRNTLWNAAEAVEKQWNSQLARRWVLTIPREIPPDQYAVLVREFCEQQFVSKGMIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEE
DFAIHDPHPPGHNPHAHVLLTMRAMDEHGKWLPKSRKVYDLDENGERIKLPSGRWKSHKE
EEEEECCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCC
DTVDWNDQKYCEIWRHEWEVIQNRYLEANDRPERVDLRSYARQGLDIVPTVHEGAAVRQM
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHH
EKRGIQTNIGNLNREIRAANSLMQSIRQLIQNLKGWITELGEKRKELLAQKAAEEATLLP
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLMKYMEIRKVERKDWTRAGQNRGTSKDLKAVSEALSYLRQKGLSTVEDLEAFLESSGK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
SAADYRNQMKPKEARSKVIDGILASRTDCKECKPVYEKYQKIFFKKTKEKFKQEHPEVAR
CHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
YEKAAAYLAKHPDDKDSTQKELQEEQETLLSDIAELKVPLTEVQEDLKKLRDIRYWVRKA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
TPGTEESKEPPKKQPIKEVLQDKADEKKAQRTAPAQTKHRQQDMEL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
>Mature Secondary Structure 
PCPHNEISIVQRSQQQSAVAAAAYQSGEKLFCGYDQEVKHYPEKRGIVHNEILLPANAP
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHCHHHCCCCCCCEEECCCCC
RSYADRNTLWNAAEAVEKQWNSQLARRWVLTIPREIPPDQYAVLVREFCEQQFVSKGMIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEE
DFAIHDPHPPGHNPHAHVLLTMRAMDEHGKWLPKSRKVYDLDENGERIKLPSGRWKSHKE
EEEEECCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCC
DTVDWNDQKYCEIWRHEWEVIQNRYLEANDRPERVDLRSYARQGLDIVPTVHEGAAVRQM
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHH
EKRGIQTNIGNLNREIRAANSLMQSIRQLIQNLKGWITELGEKRKELLAQKAAEEATLLP
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLMKYMEIRKVERKDWTRAGQNRGTSKDLKAVSEALSYLRQKGLSTVEDLEAFLESSGK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
SAADYRNQMKPKEARSKVIDGILASRTDCKECKPVYEKYQKIFFKKTKEKFKQEHPEVAR
CHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
YEKAAAYLAKHPDDKDSTQKELQEEQETLLSDIAELKVPLTEVQEDLKKLRDIRYWVRKA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
TPGTEESKEPPKKQPIKEVLQDKADEKKAQRTAPAQTKHRQQDMEL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763953; 11743193; 11743194 [H]