Definition | Eubacterium rectale ATCC 33656, complete genome. |
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Accession | NC_012781 |
Length | 3,449,685 |
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The map label for this gene is 238924833
Identifier: 238924833
GI number: 238924833
Start: 2352829
End: 2353248
Strand: Direct
Name: 238924833
Synonym: EUBREC_2484
Alternate gene names: NA
Gene position: 2352829-2353248 (Clockwise)
Preceding gene: 238924832
Following gene: 238924834
Centisome position: 68.2
GC content: 49.05
Gene sequence:
>420_bases TTGTGTATAGATTCATATGCTGATATTTCAATTCACACTCCCACGAGAGGAACGACGGCAGGTACAGGCACAGCCACTAA CCTTGCAGAATTTCAATCCACGTTCCCACGAGAGGAGCGACCATATTACACAATCGTTCGTATTCAGGTTCTTCAATTTC AATCCACGCTCCCACGAGAGGAGCGACCATTTCCAACGGACTTTGTGACGGCTTTTATGCCATATTTCAATCCACGCTCC CACGAGAGGAGCGACTTCACCGGGGACTACACCTTTGAGGTGACACTGATTTCAATACACGCTCCCACGAGAGGAGCGAC ACATAACGCCGGAACAGTGGGAACAGCTAAAGAATTTCAATACACGCTCCCACGAGAGGAGCGACAATGGGTGATGGCTA TCAAGAGGTGCAGGAAGTAA
Upstream 100 bases:
>100_bases GGTTTGCAACAATATTTATCTATTGTATTATTGATAAGCAACGTTATTGCTATAAAAATAGACTTAACTACTAATTCTAC AATAACGCAGCATATTATGA
Downstream 100 bases:
>100_bases TTTCAATCCACGCTCCCACGAGAGGCGCGACGTCGTTAAAAGCCACGGAATATAAGTTAAGCATTGATTTCAATCCACGC TCCCACGAGAGGAGCGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MCIDSYADISIHTPTRGTTAGTGTATNLAEFQSTFPREERPYYTIVRIQVLQFQSTLPREERPFPTDFVTAFMPYFNPRS HERSDFTGDYTFEVTLISIHAPTRGATHNAGTVGTAKEFQYTLPREERQWVMAIKRCRK
Sequences:
>Translated_139_residues MCIDSYADISIHTPTRGTTAGTGTATNLAEFQSTFPREERPYYTIVRIQVLQFQSTLPREERPFPTDFVTAFMPYFNPRS HERSDFTGDYTFEVTLISIHAPTRGATHNAGTVGTAKEFQYTLPREERQWVMAIKRCRK >Mature_139_residues MCIDSYADISIHTPTRGTTAGTGTATNLAEFQSTFPREERPYYTIVRIQVLQFQSTLPREERPFPTDFVTAFMPYFNPRS HERSDFTGDYTFEVTLISIHAPTRGATHNAGTVGTAKEFQYTLPREERQWVMAIKRCRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15975; Mature: 15975
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCIDSYADISIHTPTRGTTAGTGTATNLAEFQSTFPREERPYYTIVRIQVLQFQSTLPRE CCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEHHHHCCCC ERPFPTDFVTAFMPYFNPRSHERSDFTGDYTFEVTLISIHAPTRGATHNAGTVGTAKEFQ CCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEE YTLPREERQWVMAIKRCRK ECCCCHHHHHHHHHHHHCC >Mature Secondary Structure MCIDSYADISIHTPTRGTTAGTGTATNLAEFQSTFPREERPYYTIVRIQVLQFQSTLPRE CCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEHHHHCCCC ERPFPTDFVTAFMPYFNPRSHERSDFTGDYTFEVTLISIHAPTRGATHNAGTVGTAKEFQ CCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEE YTLPREERQWVMAIKRCRK ECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA