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The map label for this gene is slyA [C]

Identifier: 238922395

GI number: 238922395

Start: 597400

End: 597837

Strand: Reverse

Name: slyA [C]

Synonym: EUBELI_20631

Alternate gene names: 238922395

Gene position: 597837-597400 (Counterclockwise)

Preceding gene: 238922396

Following gene: 238922394

Centisome position: 95.39

GC content: 42.47

Gene sequence:

>438_bases
ATGGAAATGAATGGAGGATTTCTTGTTACCAAAATAAAACAGCTTGGAGACCGGATTTTCGAGAAGATTCTCAGTGAAAA
GAATATTGATGCGTTTAATGGAGCCCAAGGGCGTATTCTTTATGTGCTGTGGCAGAAGGATGGTATTTCAATCAGGTCAC
TCTCGACTAAATGCGGATTAGCGATAACATCTCTTACTACGATGCTGGAAAGAATGGAAAATCAAGGGCTGATAAGCCGT
GTTCAGTCTGAAACGGACAAAAGGAAAACGCTCCTGTTTCTGACTGAGAAAGCACATGCCTTAAAGGGCGAGTACGATTC
TGTATCTGATGAGATGGGCAGTATTTACTACAAAGGTTTTTCAGAGGAAGAAATTACCAGGTTTGAGGAATGCCTCGACC
GCATCAGAAAGAATCTTGAGGAGTGGCAGAAGCCATGA

Upstream 100 bases:

>100_bases
ATTGAAAAAAACGGAATTTACCTATTAAGACATATAAACTCTTGACAATAAAGCTCCTATATAGTATGTTTTTAATAAAC
TACTATATAGGAGCTTTTGT

Downstream 100 bases:

>100_bases
GTATTTGTATCAAAGATCAGATTCAGAACATGAATATCGTCATTGGCTGCACAGTGGGGTGTACATATTGCTATGCCTGC
AACAACGTGAAACGCTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: MarR Family Transcriptional Regulator; Transcriptional Regulator; SlyA-Like Protein

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MEMNGGFLVTKIKQLGDRIFEKILSEKNIDAFNGAQGRILYVLWQKDGISIRSLSTKCGLAITSLTTMLERMENQGLISR
VQSETDKRKTLLFLTEKAHALKGEYDSVSDEMGSIYYKGFSEEEITRFEECLDRIRKNLEEWQKP

Sequences:

>Translated_145_residues
MEMNGGFLVTKIKQLGDRIFEKILSEKNIDAFNGAQGRILYVLWQKDGISIRSLSTKCGLAITSLTTMLERMENQGLISR
VQSETDKRKTLLFLTEKAHALKGEYDSVSDEMGSIYYKGFSEEEITRFEECLDRIRKNLEEWQKP
>Mature_145_residues
MEMNGGFLVTKIKQLGDRIFEKILSEKNIDAFNGAQGRILYVLWQKDGISIRSLSTKCGLAITSLTTMLERMENQGLISR
VQSETDKRKTLLFLTEKAHALKGEYDSVSDEMGSIYYKGFSEEEITRFEECLDRIRKNLEEWQKP

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16721; Mature: 16721

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMNGGFLVTKIKQLGDRIFEKILSEKNIDAFNGAQGRILYVLWQKDGISIRSLSTKCGL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCHHHHH
AITSLTTMLERMENQGLISRVQSETDKRKTLLFLTEKAHALKGEYDSVSDEMGSIYYKGF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECHHHHHCCCCHHHHHHHHHHHCCCC
SEEEITRFEECLDRIRKNLEEWQKP
CHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEMNGGFLVTKIKQLGDRIFEKILSEKNIDAFNGAQGRILYVLWQKDGISIRSLSTKCGL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCHHHHH
AITSLTTMLERMENQGLISRVQSETDKRKTLLFLTEKAHALKGEYDSVSDEMGSIYYKGF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECHHHHHCCCCHHHHHHHHHHHCCCC
SEEEITRFEECLDRIRKNLEEWQKP
CHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA