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The map label for this gene is iolB [H]

Identifier: 238922389

GI number: 238922389

Start: 593345

End: 594160

Strand: Reverse

Name: iolB [H]

Synonym: EUBELI_20625

Alternate gene names: 238922389

Gene position: 594160-593345 (Counterclockwise)

Preceding gene: 238922390

Following gene: 238922388

Centisome position: 94.8

GC content: 40.44

Gene sequence:

>816_bases
ATGAGAAGATTTTATGAAGGCAATGATAACAAGGGTTATCAGGAAGTTGTAGATAAAGAAGCTGGCTTGGAATTAATAGG
TTTTGATTTGATAAGACTTGAGCCGGGTGAAAATGCGGTTTATGAATCAGGGGAATATGAAATAGGACTTGTTATTTTAC
AGGGAACATGCAGTGTTAAGGTTGATGATGTCACATTTGACAAGCTTGGCTCAAGAAGAAGCGTGTTTGACGGCAAGCCA
ACAACTGTTTATGTTCCAAGAGATTCTAAGTATGAAGTTACAGCAACCGGAAGCATGATGCTTGAAATCGGTGTGTGCAA
GGTTAAAGCAAGAAAGAAGTATGAAGCTTTTGTAATAGATGCAGGTGATGTTACAACTGAACACAGAGGCAAGCTTAACT
GGCAGAGAGATGTTAATGATATTATCACTTCAAAATATGAGGGAAAGGTTGACAGAATCGTGCTTGGCGAGACTTACAGC
ATGCCGGGGCAGTGGTCAAGTTATCCATCACATAAGCATGATACAGATAATCTTCCATTTGAGGTAAATATGGAGGAAAT
ATATCATTTCAAGGTGAATCCAGGTCAGGGCTTTGGTATTCAGGTAATGTATAGTGACGATATGTCATTAAGAGAGAGTT
ACATAATAAAGAATGGTGACAGCGTAGCGATTAAGAATGGCTATCATCCGGTAGCAGCAGCACCGGGATATCAGGTATAT
TATCTCTGGGTAATGGCAGGTGTTGATACAAGACAGCTTACACCTTGTGATGACCCTGACCACGCATGGGTAAAGGCTGT
TGAGAAGATGGTGTAA

Upstream 100 bases:

>100_bases
GAGGACTGGCCAGAAGTGCATAGAAATTGAAAATAACTGTTGATACAACACCAATGAGATAATAGAATAATATTAAATCT
ATTTATAAGGAGATACGAAC

Downstream 100 bases:

>100_bases
TGTATTTTGAACAAGGCATATGTGGAATCAGATATGAATTAAAAGGCTTAATTAAAAGCTGAACATTAAAGGCTGAATAT
TAAGAAAAATATTGAAACTT

Product: myo-inositol catabolism protein IolB

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MRRFYEGNDNKGYQEVVDKEAGLELIGFDLIRLEPGENAVYESGEYEIGLVILQGTCSVKVDDVTFDKLGSRRSVFDGKP
TTVYVPRDSKYEVTATGSMMLEIGVCKVKARKKYEAFVIDAGDVTTEHRGKLNWQRDVNDIITSKYEGKVDRIVLGETYS
MPGQWSSYPSHKHDTDNLPFEVNMEEIYHFKVNPGQGFGIQVMYSDDMSLRESYIIKNGDSVAIKNGYHPVAAAPGYQVY
YLWVMAGVDTRQLTPCDDPDHAWVKAVEKMV

Sequences:

>Translated_271_residues
MRRFYEGNDNKGYQEVVDKEAGLELIGFDLIRLEPGENAVYESGEYEIGLVILQGTCSVKVDDVTFDKLGSRRSVFDGKP
TTVYVPRDSKYEVTATGSMMLEIGVCKVKARKKYEAFVIDAGDVTTEHRGKLNWQRDVNDIITSKYEGKVDRIVLGETYS
MPGQWSSYPSHKHDTDNLPFEVNMEEIYHFKVNPGQGFGIQVMYSDDMSLRESYIIKNGDSVAIKNGYHPVAAAPGYQVY
YLWVMAGVDTRQLTPCDDPDHAWVKAVEKMV
>Mature_271_residues
MRRFYEGNDNKGYQEVVDKEAGLELIGFDLIRLEPGENAVYESGEYEIGLVILQGTCSVKVDDVTFDKLGSRRSVFDGKP
TTVYVPRDSKYEVTATGSMMLEIGVCKVKARKKYEAFVIDAGDVTTEHRGKLNWQRDVNDIITSKYEGKVDRIVLGETYS
MPGQWSSYPSHKHDTDNLPFEVNMEEIYHFKVNPGQGFGIQVMYSDDMSLRESYIIKNGDSVAIKNGYHPVAAAPGYQVY
YLWVMAGVDTRQLTPCDDPDHAWVKAVEKMV

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 30643; Mature: 30643

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFYEGNDNKGYQEVVDKEAGLELIGFDLIRLEPGENAVYESGEYEIGLVILQGTCSVK
CCCEECCCCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCEEECCCEEEEEEEEECCCEEE
VDDVTFDKLGSRRSVFDGKPTTVYVPRDSKYEVTATGSMMLEIGVCKVKARKKYEAFVID
ECCEEHHHCCCCCCCCCCCCCEEEECCCCCEEEEECCEEEEEEEEEEEECCCCEEEEEEE
AGDVTTEHRGKLNWQRDVNDIITSKYEGKVDRIVLGETYSMPGQWSSYPSHKHDTDNLPF
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCE
EVNMEEIYHFKVNPGQGFGIQVMYSDDMSLRESYIIKNGDSVAIKNGYHPVAAAPGYQVY
EEEHHHEEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCEEEEECCCCCEECCCCCEEE
YLWVMAGVDTRQLTPCDDPDHAWVKAVEKMV
EEEEEECCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRRFYEGNDNKGYQEVVDKEAGLELIGFDLIRLEPGENAVYESGEYEIGLVILQGTCSVK
CCCEECCCCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCEEECCCEEEEEEEEECCCEEE
VDDVTFDKLGSRRSVFDGKPTTVYVPRDSKYEVTATGSMMLEIGVCKVKARKKYEAFVID
ECCEEHHHCCCCCCCCCCCCCEEEECCCCCEEEEECCEEEEEEEEEEEECCCCEEEEEEE
AGDVTTEHRGKLNWQRDVNDIITSKYEGKVDRIVLGETYSMPGQWSSYPSHKHDTDNLPF
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCE
EVNMEEIYHFKVNPGQGFGIQVMYSDDMSLRESYIIKNGDSVAIKNGYHPVAAAPGYQVY
EEEHHHEEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCEEEEECCCCCEECCCCCEEE
YLWVMAGVDTRQLTPCDDPDHAWVKAVEKMV
EEEEEECCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA