Definition | Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequence. |
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Accession | NC_012780 |
Length | 626,744 |
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The map label for this gene is rprX [H]
Identifier: 238922348
GI number: 238922348
Start: 554744
End: 555907
Strand: Reverse
Name: rprX [H]
Synonym: EUBELI_20584
Alternate gene names: 238922348
Gene position: 555907-554744 (Counterclockwise)
Preceding gene: 238922349
Following gene: 238922347
Centisome position: 88.7
GC content: 37.89
Gene sequence:
>1164_bases ATGGATAATATGGTCAAGAAGAAACTGTCTGCATTCAGGAAAAGACAGACTGTTTTCGTTATTATATATGGATTGATTAA TGCGGCTGTTATAGCCGGAATTATAGTGTATTACAGACTTAAAGAGCAGGCATTGGCAGGTGCATTGTATTTACATGATA ATGCATATGGTGAAACATTTGTACGAAAAATGTTTTCATCAGGGATAACGGATAACAATATCAGAGCAGGTAGAACAGCC ATGGAAAGTGCCGGATACGGCAGCCATGGTTTTTCGTATATGAGCAGACTTAATGGGGAAATGTACGCTTTAATAGCAAT GATAGCTGTCCTTTTAATTGCACTCGGTTCAGGATTATATAACTGTTACAGACTTGGACATAAGGACTTTGTAAAGAAAG TGTGCGATGTATATGCAGATAACGAGAGGCTTTCTAAGCAGTTAGAGAATGAACACATTTATAATAAAGAGCAGCATCAG AAGATGCAGGATTTTATTGAGAATATTGCACATCAGATTAATACGCCGCTGGCAATTATAACTATGAAGCTGGAAATGCT TGAGGAAAAATGTGATGACAGTCCGCAGTGTAAGGAGATAGCTGATTGTACAGGTAATGCGTTCAGAATCAAAACATTTA TAAAGAAGCTGCTTGACATAAGCCGCTTTGAGGCTGGAAAAGTTGTTATGACAAGTGATGAGGTTGATGTTGCGGCAATA CTTCAGGAAAGCATTAACAGCAGTGTAGTCGACAGAAATAGAATTGTTATGGATTATGGCAATGAAAAATTATGTATGTA CGCAGATGAAGGCTGGATTGTCGAGTGTTTCATTAATCTTCTCGACAACTGTGCAGAATATTTAGCAGATGACAATACTA AGGTATATGTTGATGTAACAAGAAAGAATGATGACTGCGTAGTTACGATTGCTGATAATGGCAAAGGATTAAGTACGGAG CAGTTTAACAGTATATTTAACAGATTTGAAACTAATGGCAGTGCGGCGGATTTTAAGGCGGGTATAGGACTTAATCTGTC AAAGCTTATTGTGCAGGCACATCATGGAAGCATAAAGGCTGGTAACAGTGAAAAATATGGTGGAGCTGAATTCGTTGTGA CACTCCCGATGTACAGATTAAAAACAAAATATCAGTCCATGTAA
Upstream 100 bases:
>100_bases AGCAAAGCTTGGAACATATGGTGAGAAGCATCAGCAATACATTGAGACTATAAGAAATGTGGGCTACAGGTGGATTGACT AATAACTTTCAGGGGGATTT
Downstream 100 bases:
>100_bases GCTGGATGTAAGTTTTACAAGATATAATTATCCCAGATAGAAATCAGGGATGAGAGGGGGATGCATATGGACATAATATT AAGCGCAAAAGGTATATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MDNMVKKKLSAFRKRQTVFVIIYGLINAAVIAGIIVYYRLKEQALAGALYLHDNAYGETFVRKMFSSGITDNNIRAGRTA MESAGYGSHGFSYMSRLNGEMYALIAMIAVLLIALGSGLYNCYRLGHKDFVKKVCDVYADNERLSKQLENEHIYNKEQHQ KMQDFIENIAHQINTPLAIITMKLEMLEEKCDDSPQCKEIADCTGNAFRIKTFIKKLLDISRFEAGKVVMTSDEVDVAAI LQESINSSVVDRNRIVMDYGNEKLCMYADEGWIVECFINLLDNCAEYLADDNTKVYVDVTRKNDDCVVTIADNGKGLSTE QFNSIFNRFETNGSAADFKAGIGLNLSKLIVQAHHGSIKAGNSEKYGGAEFVVTLPMYRLKTKYQSM
Sequences:
>Translated_387_residues MDNMVKKKLSAFRKRQTVFVIIYGLINAAVIAGIIVYYRLKEQALAGALYLHDNAYGETFVRKMFSSGITDNNIRAGRTA MESAGYGSHGFSYMSRLNGEMYALIAMIAVLLIALGSGLYNCYRLGHKDFVKKVCDVYADNERLSKQLENEHIYNKEQHQ KMQDFIENIAHQINTPLAIITMKLEMLEEKCDDSPQCKEIADCTGNAFRIKTFIKKLLDISRFEAGKVVMTSDEVDVAAI LQESINSSVVDRNRIVMDYGNEKLCMYADEGWIVECFINLLDNCAEYLADDNTKVYVDVTRKNDDCVVTIADNGKGLSTE QFNSIFNRFETNGSAADFKAGIGLNLSKLIVQAHHGSIKAGNSEKYGGAEFVVTLPMYRLKTKYQSM >Mature_387_residues MDNMVKKKLSAFRKRQTVFVIIYGLINAAVIAGIIVYYRLKEQALAGALYLHDNAYGETFVRKMFSSGITDNNIRAGRTA MESAGYGSHGFSYMSRLNGEMYALIAMIAVLLIALGSGLYNCYRLGHKDFVKKVCDVYADNERLSKQLENEHIYNKEQHQ KMQDFIENIAHQINTPLAIITMKLEMLEEKCDDSPQCKEIADCTGNAFRIKTFIKKLLDISRFEAGKVVMTSDEVDVAAI LQESINSSVVDRNRIVMDYGNEKLCMYADEGWIVECFINLLDNCAEYLADDNTKVYVDVTRKNDDCVVTIADNGKGLSTE QFNSIFNRFETNGSAADFKAGIGLNLSKLIVQAHHGSIKAGNSEKYGGAEFVVTLPMYRLKTKYQSM
Specific function: Member of the two-component regulatory system rprX/rprY. May activate rprY by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=266, Percent_Identity=25.187969924812, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1786912, Length=251, Percent_Identity=26.6932270916335, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1790346, Length=224, Percent_Identity=24.1071428571429, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788549, Length=226, Percent_Identity=23.4513274336283, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788713, Length=225, Percent_Identity=24, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 43481; Mature: 43481
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNMVKKKLSAFRKRQTVFVIIYGLINAAVIAGIIVYYRLKEQALAGALYLHDNAYGETF CCHHHHHHHHHHHHHCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHH VRKMFSSGITDNNIRAGRTAMESAGYGSHGFSYMSRLNGEMYALIAMIAVLLIALGSGLY HHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHH NCYRLGHKDFVKKVCDVYADNERLSKQLENEHIYNKEQHQKMQDFIENIAHQINTPLAII HHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHH TMKLEMLEEKCDDSPQCKEIADCTGNAFRIKTFIKKLLDISRFEAGKVVMTSDEVDVAAI HHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHH LQESINSSVVDRNRIVMDYGNEKLCMYADEGWIVECFINLLDNCAEYLADDNTKVYVDVT HHHHHHHHHHCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE RKNDDCVVTIADNGKGLSTEQFNSIFNRFETNGSAADFKAGIGLNLSKLIVQAHHGSIKA ECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEC GNSEKYGGAEFVVTLPMYRLKTKYQSM CCCCCCCCCEEEEECHHHHHHHHHCCC >Mature Secondary Structure MDNMVKKKLSAFRKRQTVFVIIYGLINAAVIAGIIVYYRLKEQALAGALYLHDNAYGETF CCHHHHHHHHHHHHHCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHH VRKMFSSGITDNNIRAGRTAMESAGYGSHGFSYMSRLNGEMYALIAMIAVLLIALGSGLY HHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHH NCYRLGHKDFVKKVCDVYADNERLSKQLENEHIYNKEQHQKMQDFIENIAHQINTPLAII HHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHH TMKLEMLEEKCDDSPQCKEIADCTGNAFRIKTFIKKLLDISRFEAGKVVMTSDEVDVAAI HHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHH LQESINSSVVDRNRIVMDYGNEKLCMYADEGWIVECFINLLDNCAEYLADDNTKVYVDVT HHHHHHHHHHCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE RKNDDCVVTIADNGKGLSTEQFNSIFNRFETNGSAADFKAGIGLNLSKLIVQAHHGSIKA ECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEC GNSEKYGGAEFVVTLPMYRLKTKYQSM CCCCCCCCCEEEEECHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8469117 [H]