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The map label for this gene is slyA [C]

Identifier: 238922311

GI number: 238922311

Start: 509889

End: 510335

Strand: Reverse

Name: slyA [C]

Synonym: EUBELI_20547

Alternate gene names: 238922311

Gene position: 510335-509889 (Counterclockwise)

Preceding gene: 238922312

Following gene: 238922310

Centisome position: 81.43

GC content: 37.14

Gene sequence:

>447_bases
ATGGATAAGAAAACAAAGAATATATTTTTTGATATAGAAATGTTAAGAAGAAGACTGATAAGACCATATTTTATAGAACT
TGGGCTTACAGTTGGACAGGGGCAGCCAAGGATTCTTAAGGAATTAAGAGAACATGGGATTATGAATCAGAAAGAGCTTG
CGGATGCTTGCCTTATGGATGTAACTACAATGTCAAGAACATTAGACAGAATGGAAAAGGATGGTCTGTTAAAGAGAGAA
AATAATCCGGCAAGCAGAAGGTCGTGGAATGTGTCGCTTACTGATTGTGGCAGCCAGAAGGCTGATGAAGTTATCAGGAT
ATTTAACATAATTGATAATGTTATATATAATGGATTCAGTGAAGAAGAGGTGCGGACACTATCTGTTATGGCAGGCAAAG
TTGAGAAAAACCTCTGGGAGGCAATTAAGAATGAAGAGCAGAAATAA

Upstream 100 bases:

>100_bases
ATTGAACGTGGCAGTCACGATGAATTGTTAGAGCAGAAGGGAAGATATTACCAGTTGTATACAGGACAATTTGAGCTTGA
GTAAGAGAAAGGAATGAAAT

Downstream 100 bases:

>100_bases
ACTTATTATCAGATGGGTGTTTTATCTTCTGGGATTACTGATACTTGCACTTGGAATTATGCTTAATACGAAAGCTAATC
TTGGTGTTTCACCAATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDKKTKNIFFDIEMLRRRLIRPYFIELGLTVGQGQPRILKELREHGIMNQKELADACLMDVTTMSRTLDRMEKDGLLKRE
NNPASRRSWNVSLTDCGSQKADEVIRIFNIIDNVIYNGFSEEEVRTLSVMAGKVEKNLWEAIKNEEQK

Sequences:

>Translated_148_residues
MDKKTKNIFFDIEMLRRRLIRPYFIELGLTVGQGQPRILKELREHGIMNQKELADACLMDVTTMSRTLDRMEKDGLLKRE
NNPASRRSWNVSLTDCGSQKADEVIRIFNIIDNVIYNGFSEEEVRTLSVMAGKVEKNLWEAIKNEEQK
>Mature_148_residues
MDKKTKNIFFDIEMLRRRLIRPYFIELGLTVGQGQPRILKELREHGIMNQKELADACLMDVTTMSRTLDRMEKDGLLKRE
NNPASRRSWNVSLTDCGSQKADEVIRIFNIIDNVIYNGFSEEEVRTLSVMAGKVEKNLWEAIKNEEQK

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17264; Mature: 17264

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKTKNIFFDIEMLRRRLIRPYFIELGLTVGQGQPRILKELREHGIMNQKELADACLMD
CCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
VTTMSRTLDRMEKDGLLKRENNPASRRSWNVSLTDCGSQKADEVIRIFNIIDNVIYNGFS
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
EEEVRTLSVMAGKVEKNLWEAIKNEEQK
HHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDKKTKNIFFDIEMLRRRLIRPYFIELGLTVGQGQPRILKELREHGIMNQKELADACLMD
CCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
VTTMSRTLDRMEKDGLLKRENNPASRRSWNVSLTDCGSQKADEVIRIFNIIDNVIYNGFS
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
EEEVRTLSVMAGKVEKNLWEAIKNEEQK
HHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA