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The map label for this gene is yhjH [H]

Identifier: 238921594

GI number: 238921594

Start: 3634204

End: 3634977

Strand: Reverse

Name: yhjH [H]

Synonym: NT01EI_3746

Alternate gene names: 238921594

Gene position: 3634977-3634204 (Counterclockwise)

Preceding gene: 238921596

Following gene: 238921592

Centisome position: 95.35

GC content: 57.88

Gene sequence:

>774_bases
ATGAATATTGGCAATATCGTATCCGGTGGCCCGGGAGCCGTGTCGTTGCTGCACCACGATACCTTGGGCAGTGCCGATTG
GCAGTCCTGTGGACGGGAGTACACTTTTCAGCCTATCTACTCTACCTGTGGCCGTCTGCTGGCCATCGAGCTGCTAACCC
AGGTGGCTCACCCGGATCAGCCGACGCAGCGGCTTTCACCGGAACTCTACTTCGCCAATATTCCGCTGTCGCTGCGTTTG
CAGGTGCTGCTGGAACAGCTGCGCCTGGTACATCACTGGCGTGCTTTTTTCGGGCAGTATGGCCTGTTTGTCTCTATCAA
TGTGGATGGCCAGGTGCTGCATGCGCTGCAGAAGAAGGCTGAGGCTGTGACGCTGATCGGTGAACTGCCGTTTTTACGCT
TTGAGATACTTGAGCATGTACATGGCAGTGCACCGATCCACGGGCTGCCGGATCTGCATCGCCTATGGTTGGATGACTTT
GGCAGCGGCCTGGCTAACTTCTCTTCGCTCATCGATGTCCGCTATGAGTTCGTCAAGCTGGATCGCGCCGTGTTTGCCCT
GCTGTGTCAGACGCAGCAGGGAACCGATCTATTTATGGCGCTGGTGGCGATGATGCGCCAGTACTCGCGTGGGGTGATTG
TTGAAGGGGTGGAGACGGCTCAGGCCTGGCAGCTGGTGCAACGCTCGGACGCCTGTGCGGCCCAGGGCTACTACCTGTCA
CGACCGCTCCAGTTTGAACGTCTTCCCCTATTACCTCAGCGTTTCGCCGGCTAG

Upstream 100 bases:

>100_bases
CGATAAACACAGCAGTAGGGAGGGGTATGCTCCACTGCTGGGCTCCCGTTATAGGGGCGCAGAGGCTGCCGTTCTTCAGA
GATCAACGGATGGGAAATGC

Downstream 100 bases:

>100_bases
TCGGTGTGCGGCGGCGAGGGATACAGCTGCGGGCAGCGATGGTCCTGAATCTCCTCAATCGAGGCCAGACTGCCGCGCCA
CAGCGCCCGGCGGGTCGCCA

Product: EAL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNIGNIVSGGPGAVSLLHHDTLGSADWQSCGREYTFQPIYSTCGRLLAIELLTQVAHPDQPTQRLSPELYFANIPLSLRL
QVLLEQLRLVHHWRAFFGQYGLFVSINVDGQVLHALQKKAEAVTLIGELPFLRFEILEHVHGSAPIHGLPDLHRLWLDDF
GSGLANFSSLIDVRYEFVKLDRAVFALLCQTQQGTDLFMALVAMMRQYSRGVIVEGVETAQAWQLVQRSDACAAQGYYLS
RPLQFERLPLLPQRFAG

Sequences:

>Translated_257_residues
MNIGNIVSGGPGAVSLLHHDTLGSADWQSCGREYTFQPIYSTCGRLLAIELLTQVAHPDQPTQRLSPELYFANIPLSLRL
QVLLEQLRLVHHWRAFFGQYGLFVSINVDGQVLHALQKKAEAVTLIGELPFLRFEILEHVHGSAPIHGLPDLHRLWLDDF
GSGLANFSSLIDVRYEFVKLDRAVFALLCQTQQGTDLFMALVAMMRQYSRGVIVEGVETAQAWQLVQRSDACAAQGYYLS
RPLQFERLPLLPQRFAG
>Mature_257_residues
MNIGNIVSGGPGAVSLLHHDTLGSADWQSCGREYTFQPIYSTCGRLLAIELLTQVAHPDQPTQRLSPELYFANIPLSLRL
QVLLEQLRLVHHWRAFFGQYGLFVSINVDGQVLHALQKKAEAVTLIGELPFLRFEILEHVHGSAPIHGLPDLHRLWLDDF
GSGLANFSSLIDVRYEFVKLDRAVFALLCQTQQGTDLFMALVAMMRQYSRGVIVEGVETAQAWQLVQRSDACAAQGYYLS
RPLQFERLPLLPQRFAG

Specific function: A bis-(3'-5') cyclic diguanylic acid (c-di-GMP) phosphodiesterase involved in regulating the levels of c-di-GMP that control cell motility (the flagella) and adhesion (adhesive curli fimbriae). The YhjH effect on flagella is controlled via the c-di-GMP-bi

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87082280, Length=224, Percent_Identity=48.2142857142857, Blast_Score=222, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: =3.1.4.52 [H]

Molecular weight: Translated: 28841; Mature: 28841

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIGNIVSGGPGAVSLLHHDTLGSADWQSCGREYTFQPIYSTCGRLLAIELLTQVAHPDQ
CCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PTQRLSPELYFANIPLSLRLQVLLEQLRLVHHWRAFFGQYGLFVSINVDGQVLHALQKKA
CHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
EAVTLIGELPFLRFEILEHVHGSAPIHGLPDLHRLWLDDFGSGLANFSSLIDVRYEFVKL
HHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
DRAVFALLCQTQQGTDLFMALVAMMRQYSRGVIVEGVETAQAWQLVQRSDACAAQGYYLS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCHHHCCEECC
RPLQFERLPLLPQRFAG
CCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MNIGNIVSGGPGAVSLLHHDTLGSADWQSCGREYTFQPIYSTCGRLLAIELLTQVAHPDQ
CCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PTQRLSPELYFANIPLSLRLQVLLEQLRLVHHWRAFFGQYGLFVSINVDGQVLHALQKKA
CHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
EAVTLIGELPFLRFEILEHVHGSAPIHGLPDLHRLWLDDFGSGLANFSSLIDVRYEFVKL
HHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
DRAVFALLCQTQQGTDLFMALVAMMRQYSRGVIVEGVETAQAWQLVQRSDACAAQGYYLS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCHHHCCEECC
RPLQFERLPLLPQRFAG
CCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]