Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is fusA [H]
Identifier: 238921445
GI number: 238921445
Start: 3484627
End: 3486735
Strand: Reverse
Name: fusA [H]
Synonym: NT01EI_3597
Alternate gene names: 238921445
Gene position: 3486735-3484627 (Counterclockwise)
Preceding gene: 238921446
Following gene: 238921444
Centisome position: 91.46
GC content: 54.05
Gene sequence:
>2109_bases ATGGCTCGTACAACACCCATTTCGCGTTACCGTAACATCGGTATCAGCGCTCACATCGACGCCGGTAAGACCACTACTAC CGAACGTATCCTGTTCTACACCGGTGTAAACCATAAGATCGGTGAAGTTCATGATGGTGCTGCCACCATGGACTGGATGG AGCAGGAGCAGGAGCGTGGTATCACCATTACCTCCGCTGCGACCACCGCTTTCTGGTCTGGCATGGCCAAACAGTTTGAG CCGCACCGTATCAACATCATCGATACCCCGGGGCACGTTGACTTCACCATCGAAGTAGAACGTTCCATGCGTGTACTGGA TGGTGCGGTCATGGTTTACTGCGCCGTTGGTGGTGTTCAGCCGCAGTCTGAAACCGTATGGCGTCAGGCCAACAAGTATC ATGTTCCGCGCATCGCGTTCGTTAACAAAATGGACCGCATGGGTGCGAACTTCCTGAAAGTTGTTAACCAGATCAAAACC CGCCTGGGCGCTAACCCGGTTCCGTTGCAGTTGGCAATCGGTGCTGAAGAAGCATTCACCGGTATCGTTGACCTGGTTAA AATGAAAGCCATCAACTGGAACGAAGCCGATCAGGGCGTGACCTTCACCTATGAAGACATCCCGGCTGACATGGTTGAAC TGGCTAACGAATGGCACCAGTTCCTGGTTGAGTCCGCAGCCGAAGCGTCTGAAGAGCTGATGGACAAGTACCTGGGCGGT GAAACGCTGTCTGAAGAAGAGATCAAAAATGCTCTGCGTCAGCGCGTACTGAACAACGAAATCATCCTGGTTACCTGTGG CTCCGCGTTCAAGAACAAGGGCGTACAGGCAATGCTGGATGCAGTCATTGAGTACCTGCCGTCACCGACCGATGTTCCGG CGATCAAAGGTATCCTGGACGACGGTAAAGATACCCCGGCTGAGCGTCACTCTGACGACAACGAGCCGTTCGCGGCGCTG GCGTTCAAAATCGCCACCGACCCGTTCGTGGGTAACCTGACCTTCTTCCGCGTATACTCCGGTGTGGTTAACTCTGGTGA TACCGTACTGAACTCCGTGAAGTCTGCACGTGAGCGTTTCGGCCGTATCGTTCAGATGCACGCCAACAAGCGTGAAGAGA TCAAAGAAGTTCGCGCGGGTGACATCGCCGCGGCAATCGGTCTGAAGGACGTCACCACCGGTGATACCCTGTGTGACCAG AACGCGCCGATCATCCTGGAGCGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCCGTTGAGCCGAAAACCAAGGCTGA CCAGGAGAAAATGGGCCTGGCACTGGGCCGTCTGGCTAAGGAAGACCCGTCTTTCCGCGTACGTACTGACGAAGAATCCA ACCAGACCATCATCTCCGGCATGGGTGAATTGCACCTGGAAATCATCGTTGACCGTATGAAGCGCGAGTTCAACGTTGAA GCCAACGTCGGTAAACCGCAGGTTGCTTACCGTGAAACCATCCGTGACACCGTCAAGGATGTTGAAGGTAAACACGCCAA ACAGTCCGGTGGTCGCGGTCAGTACGGTCATGTCGTTATCGACATGTTCCCGTTGGAGCCGGGTGGCGAAGGCTACACCT TCACCAACGACATCAAGGGCGGTGTGATTCCGGGTGAATACATCCCGGCAGTTGACAAGGGTATCCAAGAGCAGCTGAAG TCCGGTCCGATGGCCGGTTATCCGGTAGTAGACCTGGGCGTACGTCTGCACTTTGGTTCTTACCATGACGTTGACTCCTC TGAACTGGCGTTTAAACTGGCTGCCTCTCTCGCGTTTAAAGAAGCCTTCAAACGCGCTAAGCCGGTTCTGCTTGAGCCGA TCATGAAGGTTGAAGTAGAAACTCCGGAAGATTACATGGGTGACGTTATCGGTGACTTGAACCGTCGTCGCGGCATGATC GAAGGTATGGAAGATACTGCGACTGGCAAGACTGTTCGTGCGCAGGTTCCGTTGTCTGAAATGTTTGGTTATGCTACTGA CCTGCGTTCCCAGACCCAGGGCCGTGCTTCATACTCCATGGAGTTCCTGAAGTATGCTGAAGCACCGACTAACGTCGCTC AGGCCGTTATTGAAGCACGTGGCAAATAA
Upstream 100 bases:
>100_bases GGTAATATCATCGGTATGTTAGTCACCAAGCGGGCGCTTAAGCTTAAGTCGCCCGCTTTGGGTAACTTAACTTGAACGCC CTAGGATATAGAGGAATCAA
Downstream 100 bases:
>100_bases GCCTCTGCTTTAACATATTGATCCCGCGCCCTCTCCTTCGGTGAGGGCGCAAGATAAGGAATATAACCGTGTCTAAAGAA AAATTTGAACGTTCAAAACC
Product: hypothetical protein
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 702; Mature: 701
Protein sequence:
>702_residues MARTTPISRYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQFE PHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYHVPRIAFVNKMDRMGANFLKVVNQIKT RLGANPVPLQLAIGAEEAFTGIVDLVKMKAINWNEADQGVTFTYEDIPADMVELANEWHQFLVESAAEASEELMDKYLGG ETLSEEEIKNALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIEYLPSPTDVPAIKGILDDGKDTPAERHSDDNEPFAAL AFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKSARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDQ NAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVRTDEESNQTIISGMGELHLEIIVDRMKREFNVE ANVGKPQVAYRETIRDTVKDVEGKHAKQSGGRGQYGHVVIDMFPLEPGGEGYTFTNDIKGGVIPGEYIPAVDKGIQEQLK SGPMAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASLAFKEAFKRAKPVLLEPIMKVEVETPEDYMGDVIGDLNRRRGMI EGMEDTATGKTVRAQVPLSEMFGYATDLRSQTQGRASYSMEFLKYAEAPTNVAQAVIEARGK
Sequences:
>Translated_702_residues MARTTPISRYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQFE PHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYHVPRIAFVNKMDRMGANFLKVVNQIKT RLGANPVPLQLAIGAEEAFTGIVDLVKMKAINWNEADQGVTFTYEDIPADMVELANEWHQFLVESAAEASEELMDKYLGG ETLSEEEIKNALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIEYLPSPTDVPAIKGILDDGKDTPAERHSDDNEPFAAL AFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKSARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDQ NAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVRTDEESNQTIISGMGELHLEIIVDRMKREFNVE ANVGKPQVAYRETIRDTVKDVEGKHAKQSGGRGQYGHVVIDMFPLEPGGEGYTFTNDIKGGVIPGEYIPAVDKGIQEQLK SGPMAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASLAFKEAFKRAKPVLLEPIMKVEVETPEDYMGDVIGDLNRRRGMI EGMEDTATGKTVRAQVPLSEMFGYATDLRSQTQGRASYSMEFLKYAEAPTNVAQAVIEARGK >Mature_701_residues ARTTPISRYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQFEP HRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYHVPRIAFVNKMDRMGANFLKVVNQIKTR LGANPVPLQLAIGAEEAFTGIVDLVKMKAINWNEADQGVTFTYEDIPADMVELANEWHQFLVESAAEASEELMDKYLGGE TLSEEEIKNALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIEYLPSPTDVPAIKGILDDGKDTPAERHSDDNEPFAALA FKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKSARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDQN APIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVRTDEESNQTIISGMGELHLEIIVDRMKREFNVEA NVGKPQVAYRETIRDTVKDVEGKHAKQSGGRGQYGHVVIDMFPLEPGGEGYTFTNDIKGGVIPGEYIPAVDKGIQEQLKS GPMAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASLAFKEAFKRAKPVLLEPIMKVEVETPEDYMGDVIGDLNRRRGMIE GMEDTATGKTVRAQVPLSEMFGYATDLRSQTQGRASYSMEFLKYAEAPTNVAQAVIEARGK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=704, Percent_Identity=45.0284090909091, Blast_Score=576, Evalue=1e-164, Organism=Homo sapiens, GI19923640, Length=718, Percent_Identity=37.883008356546, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI25306287, Length=694, Percent_Identity=37.1757925072046, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI25306283, Length=457, Percent_Identity=39.6061269146608, Blast_Score=302, Evalue=8e-82, Organism=Homo sapiens, GI4503483, Length=469, Percent_Identity=27.7185501066098, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI157426893, Length=154, Percent_Identity=35.7142857142857, Blast_Score=101, Evalue=3e-21, Organism=Homo sapiens, GI94966754, Length=137, Percent_Identity=39.4160583941606, Blast_Score=97, Evalue=6e-20, Organism=Homo sapiens, GI310132016, Length=120, Percent_Identity=40, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI310110807, Length=120, Percent_Identity=40, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI310123363, Length=120, Percent_Identity=40, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI94966752, Length=68, Percent_Identity=45.5882352941176, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1789738, Length=704, Percent_Identity=90.7670454545455, Blast_Score=1325, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=497, Percent_Identity=25.9557344064386, Blast_Score=139, Evalue=8e-34, Organism=Escherichia coli, GI48994988, Length=182, Percent_Identity=37.9120879120879, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1788922, Length=155, Percent_Identity=35.4838709677419, Blast_Score=90, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17533571, Length=705, Percent_Identity=43.8297872340426, Blast_Score=543, Evalue=1e-155, Organism=Caenorhabditis elegans, GI17556745, Length=711, Percent_Identity=30.098452883263, Blast_Score=299, Evalue=4e-81, Organism=Caenorhabditis elegans, GI17506493, Length=505, Percent_Identity=27.3267326732673, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17557151, Length=192, Percent_Identity=34.375, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71988819, Length=148, Percent_Identity=34.4594594594595, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71988811, Length=147, Percent_Identity=35.3741496598639, Blast_Score=83, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323098, Length=700, Percent_Identity=42.2857142857143, Blast_Score=563, Evalue=1e-161, Organism=Saccharomyces cerevisiae, GI6322359, Length=801, Percent_Identity=30.3370786516854, Blast_Score=367, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6324707, Length=475, Percent_Identity=27.1578947368421, Blast_Score=104, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6320593, Length=475, Percent_Identity=27.1578947368421, Blast_Score=104, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6323320, Length=153, Percent_Identity=33.9869281045752, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6324166, Length=176, Percent_Identity=34.6590909090909, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24582462, Length=706, Percent_Identity=44.4759206798867, Blast_Score=584, Evalue=1e-167, Organism=Drosophila melanogaster, GI221458488, Length=740, Percent_Identity=31.6216216216216, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24585709, Length=812, Percent_Identity=27.0935960591133, Blast_Score=172, Evalue=9e-43, Organism=Drosophila melanogaster, GI24585711, Length=812, Percent_Identity=27.0935960591133, Blast_Score=172, Evalue=1e-42, Organism=Drosophila melanogaster, GI24585713, Length=812, Percent_Identity=27.0935960591133, Blast_Score=172, Evalue=1e-42, Organism=Drosophila melanogaster, GI78706572, Length=186, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI28574573, Length=141, Percent_Identity=37.5886524822695, Blast_Score=83, Evalue=6e-16,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77473; Mature: 77342
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTTPISRYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG CCCCCCHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTAFWSGMAKQFEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ EEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECHHHHHHHHHHEEEEECCCCC PQSETVWRQANKYHVPRIAFVNKMDRMGANFLKVVNQIKTRLGANPVPLQLAIGAEEAFT CCHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHH GIVDLVKMKAINWNEADQGVTFTYEDIPADMVELANEWHQFLVESAAEASEELMDKYLGG HHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ETLSEEEIKNALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIEYLPSPTDVPAIKGILD CCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHC DGKDTPAERHSDDNEPFAALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKSARERF CCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH GRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDQNAPIILERMEFPEPVISIAV HHHHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEE EPKTKADQEKMGLALGRLAKEDPSFRVRTDEESNQTIISGMGELHLEIIVDRMKREFNVE CCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC ANVGKPQVAYRETIRDTVKDVEGKHAKQSGGRGQYGHVVIDMFPLEPGGEGYTFTNDIKG CCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCC GVIPGEYIPAVDKGIQEQLKSGPMAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASLAFK CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECEEEEECCCCCCCHHHHHHHHHHHHHHH EAFKRAKPVLLEPIMKVEVETPEDYMGDVIGDLNRRRGMIEGMEDTATGKTVRAQVPLSE HHHHHCCCHHHCCHHEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHH MFGYATDLRSQTQGRASYSMEFLKYAEAPTNVAQAVIEARGK HHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure ARTTPISRYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG CCCCCHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTAFWSGMAKQFEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ EEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECHHHHHHHHHHEEEEECCCCC PQSETVWRQANKYHVPRIAFVNKMDRMGANFLKVVNQIKTRLGANPVPLQLAIGAEEAFT CCHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHH GIVDLVKMKAINWNEADQGVTFTYEDIPADMVELANEWHQFLVESAAEASEELMDKYLGG HHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ETLSEEEIKNALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIEYLPSPTDVPAIKGILD CCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHC DGKDTPAERHSDDNEPFAALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKSARERF CCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH GRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDQNAPIILERMEFPEPVISIAV HHHHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEE EPKTKADQEKMGLALGRLAKEDPSFRVRTDEESNQTIISGMGELHLEIIVDRMKREFNVE CCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC ANVGKPQVAYRETIRDTVKDVEGKHAKQSGGRGQYGHVVIDMFPLEPGGEGYTFTNDIKG CCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCC GVIPGEYIPAVDKGIQEQLKSGPMAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASLAFK CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECEEEEECCCCCCCHHHHHHHHHHHHHHH EAFKRAKPVLLEPIMKVEVETPEDYMGDVIGDLNRRRGMIEGMEDTATGKTVRAQVPLSE HHHHHCCCHHHCCHHEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHH MFGYATDLRSQTQGRASYSMEFLKYAEAPTNVAQAVIEARGK HHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA