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The map label for this gene is yhdN [H]

Identifier: 238921417

GI number: 238921417

Start: 3468957

End: 3469301

Strand: Reverse

Name: yhdN [H]

Synonym: NT01EI_3568

Alternate gene names: 238921417

Gene position: 3469301-3468957 (Counterclockwise)

Preceding gene: 238921418

Following gene: 238921416

Centisome position: 91.0

GC content: 57.39

Gene sequence:

>345_bases
ATGTCGATTATTGATGACTGGCCTGAACGCCATATCGCCGCCGCTCAGGCACGCGGTGAGCTCTTTGCGCTGCCTGGCGA
GGGAAGACCGCTGATCCTGGACGATGATAGCCGTATTCCTGCCGGGCTGCGATCCGACATTCTTCTGCTCAAGAATGCGG
GCTGCCAGCCGTCGTTGCTGGATATGCTACAGGAGATCGACGGCGATCATCCCGACTATCGTGTGCTGAGTAAACGACTG
ACACTGCTGGAGCTGAACCTGCAGCAGGTCAGCATAGATATCACTTTTTTGCGCGGTATCTACGGCGAGCCGCAGCGGCG
GCAGTTGATACCAACGGGAGAGTAG

Upstream 100 bases:

>100_bases
CCGGGCCTTGGCCCGGTTTTTTTATTGTCTGAATTCCGCCCCGCTTTATTTTCCCACCGTCTGGCTTTACCCTGCATACA
GATACCTAACCGGAATCACT

Downstream 100 bases:

>100_bases
CCATGTACCGTATCGGTCAACTGGCGAAGCTGGCCGGCGTAACGCCGGATACTATCCGCTATTATGAAAAGCAGCAGATG
ATGGTTCACGAGGTGCGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSIIDDWPERHIAAAQARGELFALPGEGRPLILDDDSRIPAGLRSDILLLKNAGCQPSLLDMLQEIDGDHPDYRVLSKRL
TLLELNLQQVSIDITFLRGIYGEPQRRQLIPTGE

Sequences:

>Translated_114_residues
MSIIDDWPERHIAAAQARGELFALPGEGRPLILDDDSRIPAGLRSDILLLKNAGCQPSLLDMLQEIDGDHPDYRVLSKRL
TLLELNLQQVSIDITFLRGIYGEPQRRQLIPTGE
>Mature_113_residues
SIIDDWPERHIAAAQARGELFALPGEGRPLILDDDSRIPAGLRSDILLLKNAGCQPSLLDMLQEIDGDHPDYRVLSKRLT
LLELNLQQVSIDITFLRGIYGEPQRRQLIPTGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789688, Length=113, Percent_Identity=50.4424778761062, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018961 [H]

Pfam domain/function: PF09350 DUF1992 [H]

EC number: NA

Molecular weight: Translated: 12785; Mature: 12654

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIDDWPERHIAAAQARGELFALPGEGRPLILDDDSRIPAGLRSDILLLKNAGCQPSLL
CCCCCCCCHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHH
DMLQEIDGDHPDYRVLSKRLTLLELNLQQVSIDITFLRGIYGEPQRRQLIPTGE
HHHHHHCCCCCCHHHHHHHHHHEEECEEHEEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SIIDDWPERHIAAAQARGELFALPGEGRPLILDDDSRIPAGLRSDILLLKNAGCQPSLL
CCCCCCCHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHH
DMLQEIDGDHPDYRVLSKRLTLLELNLQQVSIDITFLRGIYGEPQRRQLIPTGE
HHHHHHCCCCCCHHHHHHHHHHEEECEEHEEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063098; 9278503 [H]