Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238921364

Identifier: 238921364

GI number: 238921364

Start: 3403782

End: 3404078

Strand: Reverse

Name: 238921364

Synonym: NT01EI_3508

Alternate gene names: NA

Gene position: 3404078-3403782 (Counterclockwise)

Preceding gene: 238921365

Following gene: 238921363

Centisome position: 89.29

GC content: 55.89

Gene sequence:

>297_bases
ATGCATGATGCCATGAATATCCGCCGTCTGACGTTTGATGTCGATAAAGCGATGTCACAGCCCACGATCCTGGAGATAGC
CCAGGCCATTCACGGCTGCCCTGGCGTAAGCGCATTTAATATTACGGTGAGCAATATCGATATCGAAACCGTCGGCATGG
ACATTACCATCGTCGGGGACTACCTCGATCACGACCGGCTGGTCGAGGCGATGGAGAATACCGGCGCAGCGGTGCACAGC
GTCGATCAGATCGTCTGCGGCAGCGATATCGTTGAGCGTATCGCGCGGGTACGCTGA

Upstream 100 bases:

>100_bases
ATTTGCCAAAAAGGGACGTTAGGGGGGGGCGCGTTGGCGTAGGATCGCGTTATTGCGCTGGAAGAAGCAGCCCGCCGACC
GGGCTACAGAGGAGCATATG

Downstream 100 bases:

>100_bases
GTATGCGCCTGCTACGGCGGGAGAATCGGAACTACAACTTGGTCGCCCTGTTGGGCGGTGCGGTTGCCGGCACCCTGACA
GCCGCGCTGCTCTCTCTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MHDAMNIRRLTFDVDKAMSQPTILEIAQAIHGCPGVSAFNITVSNIDIETVGMDITIVGDYLDHDRLVEAMENTGAAVHS
VDQIVCGSDIVERIARVR

Sequences:

>Translated_98_residues
MHDAMNIRRLTFDVDKAMSQPTILEIAQAIHGCPGVSAFNITVSNIDIETVGMDITIVGDYLDHDRLVEAMENTGAAVHS
VDQIVCGSDIVERIARVR
>Mature_98_residues
MHDAMNIRRLTFDVDKAMSQPTILEIAQAIHGCPGVSAFNITVSNIDIETVGMDITIVGDYLDHDRLVEAMENTGAAVHS
VDQIVCGSDIVERIARVR

Specific function: Unknown

COG id: COG1888

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10708; Mature: 10708

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDAMNIRRLTFDVDKAMSQPTILEIAQAIHGCPGVSAFNITVSNIDIETVGMDITIVGD
CCCCCCHHHHEEEHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCEEEEECEEEEEECC
YLDHDRLVEAMENTGAAVHSVDQIVCGSDIVERIARVR
CCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MHDAMNIRRLTFDVDKAMSQPTILEIAQAIHGCPGVSAFNITVSNIDIETVGMDITIVGD
CCCCCCHHHHEEEHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCEEEEECEEEEEECC
YLDHDRLVEAMENTGAAVHSVDQIVCGSDIVERIARVR
CCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA