Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921364
Identifier: 238921364
GI number: 238921364
Start: 3403782
End: 3404078
Strand: Reverse
Name: 238921364
Synonym: NT01EI_3508
Alternate gene names: NA
Gene position: 3404078-3403782 (Counterclockwise)
Preceding gene: 238921365
Following gene: 238921363
Centisome position: 89.29
GC content: 55.89
Gene sequence:
>297_bases ATGCATGATGCCATGAATATCCGCCGTCTGACGTTTGATGTCGATAAAGCGATGTCACAGCCCACGATCCTGGAGATAGC CCAGGCCATTCACGGCTGCCCTGGCGTAAGCGCATTTAATATTACGGTGAGCAATATCGATATCGAAACCGTCGGCATGG ACATTACCATCGTCGGGGACTACCTCGATCACGACCGGCTGGTCGAGGCGATGGAGAATACCGGCGCAGCGGTGCACAGC GTCGATCAGATCGTCTGCGGCAGCGATATCGTTGAGCGTATCGCGCGGGTACGCTGA
Upstream 100 bases:
>100_bases ATTTGCCAAAAAGGGACGTTAGGGGGGGGCGCGTTGGCGTAGGATCGCGTTATTGCGCTGGAAGAAGCAGCCCGCCGACC GGGCTACAGAGGAGCATATG
Downstream 100 bases:
>100_bases GTATGCGCCTGCTACGGCGGGAGAATCGGAACTACAACTTGGTCGCCCTGTTGGGCGGTGCGGTTGCCGGCACCCTGACA GCCGCGCTGCTCTCTCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MHDAMNIRRLTFDVDKAMSQPTILEIAQAIHGCPGVSAFNITVSNIDIETVGMDITIVGDYLDHDRLVEAMENTGAAVHS VDQIVCGSDIVERIARVR
Sequences:
>Translated_98_residues MHDAMNIRRLTFDVDKAMSQPTILEIAQAIHGCPGVSAFNITVSNIDIETVGMDITIVGDYLDHDRLVEAMENTGAAVHS VDQIVCGSDIVERIARVR >Mature_98_residues MHDAMNIRRLTFDVDKAMSQPTILEIAQAIHGCPGVSAFNITVSNIDIETVGMDITIVGDYLDHDRLVEAMENTGAAVHS VDQIVCGSDIVERIARVR
Specific function: Unknown
COG id: COG1888
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10708; Mature: 10708
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDAMNIRRLTFDVDKAMSQPTILEIAQAIHGCPGVSAFNITVSNIDIETVGMDITIVGD CCCCCCHHHHEEEHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCEEEEECEEEEEECC YLDHDRLVEAMENTGAAVHSVDQIVCGSDIVERIARVR CCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure MHDAMNIRRLTFDVDKAMSQPTILEIAQAIHGCPGVSAFNITVSNIDIETVGMDITIVGD CCCCCCHHHHEEEHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCEEEEECEEEEEECC YLDHDRLVEAMENTGAAVHSVDQIVCGSDIVERIARVR CCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA