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The map label for this gene is uidC [H]

Identifier: 238921286

GI number: 238921286

Start: 3314133

End: 3315488

Strand: Reverse

Name: uidC [H]

Synonym: NT01EI_3429

Alternate gene names: 238921286

Gene position: 3315488-3314133 (Counterclockwise)

Preceding gene: 238921287

Following gene: 238921285

Centisome position: 86.97

GC content: 56.12

Gene sequence:

>1356_bases
ATGACTTATCGGCAGGCTGTTTTCTGCAAAATAGCCTGCCATCACCGCAATAAATACGCCACTTTATATTATTTTCACCG
GGATATAAAAATGGAAATTAAAATTAAAATAATATGCCTTGGTCTATTGGGCGCCGTGATGATGCCGCCGTTGGGCTACG
CCGCCGCACCACAGGATGACGAGGACTATATCCGCCTGCGCCTGCGTAATGATCTGCGCCGGGCCGATAAGCCCAGCGCC
GGGAGCGGACGGGATGTCTATGCCTGGGTACAGGGGGCGATGCTGGATGTGAACAGCCACTACTACCGCGATATTATCGG
CGTCGAGGGGGGCGCCTATTATGTCTATAAACTGGGGACCCGAGCCAGTGCCTCCAGCCGTTTTTATCTGGATGGTCACG
ATAGCTTTGGCTATGCCCTGGGGGCGGTAAAAGTAAAACTGGGGGAGTATAGCAAACTGAAAATCGGGCGTTTCGGTACC
GATGCGCTGTATGGCAGCCTGCCCTATTCCGTTCCCATGATCGATGGGGCCTCCAATCGCACGCTGCCGGTGGTCTCGGA
AGGGGCAATGGGGCAGTTTGCCCTGAGCGAGCATGTCGATTTATGGATGCTGTACCGCCAGCGGGTCTTTACCGCCTTCG
ATGCCGATAAAGGGGTCCGTTATGAAGGGGTGCTCAACCCACTGACCGGGGAATTTGATATGCACCGTCCGCTGGGGGCG
GTCGCCGCTGTTTATCGCGATGATAATGGCCAGTTTGGTGCGGGGGTATCCTACCAGTCCGATGTGGCCCTGCAGGCTTC
CAGTACCCTGAAATATACCCAGCCGCTGCAGAATGACACAAAATTGCAGTACGATGCGATCCTCTACTATGCCAGCCTGG
ATGGGGTGAGCCGACGGGCGGGACAGCCGAATGAATCGATTATTGTCTCTGCCTCGGCGGCGTGGAGCGTGGGGCGCTGG
GGATTGTCGGCGGCGTTTGAGAAAGTGATCCATAATCTGGGGTACACAGTCAATACCGATATCGGCTACCCGTTTTCCCT
GTCGATGGATCGCAATTATGAGGGGATGTGGTCCTATCAACTGGGGGCCAGCTATAATCTGTTACCCAACGTGAACCTGA
TGTTGATGCCCATCTACACCGATGGCTGGGAGGACTCCCGGCGGAACGTGCGGGTACAGGGGCTGGGTATCATGGGGGTG
CTCTCCGGGCGCATCACCTCCGGCCCGCTGGCGGGGCTGACGGCCTTTATCGCTGCCGATCGCACGCGGGAGAAACGCCA
GGGCAGCCACTTGGGCGATCGTCTGAACTATTGGGATATTAAGGGCGGCATTCAGTATGACTTTGTGTTGAAGTGA

Upstream 100 bases:

>100_bases
ACGCTTTGCGGGAATTATCGATGAGATTAAACAAAGAAAAATACAGTCTGGGGATGACGCAGTAACACCGTAAAAATAAC
GTAGGGCACGCTTTCGCGGT

Downstream 100 bases:

>100_bases
TGATCCGATGGCCGCCAGTCGACGGGCGGATTATCTCCCGGTACCACCAATATTACGACCATTCACTGCGTGGTGGATAG
CGCAGTGAATGTGTCGTGGC

Product: outer membrane porin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MTYRQAVFCKIACHHRNKYATLYYFHRDIKMEIKIKIICLGLLGAVMMPPLGYAAAPQDDEDYIRLRLRNDLRRADKPSA
GSGRDVYAWVQGAMLDVNSHYYRDIIGVEGGAYYVYKLGTRASASSRFYLDGHDSFGYALGAVKVKLGEYSKLKIGRFGT
DALYGSLPYSVPMIDGASNRTLPVVSEGAMGQFALSEHVDLWMLYRQRVFTAFDADKGVRYEGVLNPLTGEFDMHRPLGA
VAAVYRDDNGQFGAGVSYQSDVALQASSTLKYTQPLQNDTKLQYDAILYYASLDGVSRRAGQPNESIIVSASAAWSVGRW
GLSAAFEKVIHNLGYTVNTDIGYPFSLSMDRNYEGMWSYQLGASYNLLPNVNLMLMPIYTDGWEDSRRNVRVQGLGIMGV
LSGRITSGPLAGLTAFIAADRTREKRQGSHLGDRLNYWDIKGGIQYDFVLK

Sequences:

>Translated_451_residues
MTYRQAVFCKIACHHRNKYATLYYFHRDIKMEIKIKIICLGLLGAVMMPPLGYAAAPQDDEDYIRLRLRNDLRRADKPSA
GSGRDVYAWVQGAMLDVNSHYYRDIIGVEGGAYYVYKLGTRASASSRFYLDGHDSFGYALGAVKVKLGEYSKLKIGRFGT
DALYGSLPYSVPMIDGASNRTLPVVSEGAMGQFALSEHVDLWMLYRQRVFTAFDADKGVRYEGVLNPLTGEFDMHRPLGA
VAAVYRDDNGQFGAGVSYQSDVALQASSTLKYTQPLQNDTKLQYDAILYYASLDGVSRRAGQPNESIIVSASAAWSVGRW
GLSAAFEKVIHNLGYTVNTDIGYPFSLSMDRNYEGMWSYQLGASYNLLPNVNLMLMPIYTDGWEDSRRNVRVQGLGIMGV
LSGRITSGPLAGLTAFIAADRTREKRQGSHLGDRLNYWDIKGGIQYDFVLK
>Mature_450_residues
TYRQAVFCKIACHHRNKYATLYYFHRDIKMEIKIKIICLGLLGAVMMPPLGYAAAPQDDEDYIRLRLRNDLRRADKPSAG
SGRDVYAWVQGAMLDVNSHYYRDIIGVEGGAYYVYKLGTRASASSRFYLDGHDSFGYALGAVKVKLGEYSKLKIGRFGTD
ALYGSLPYSVPMIDGASNRTLPVVSEGAMGQFALSEHVDLWMLYRQRVFTAFDADKGVRYEGVLNPLTGEFDMHRPLGAV
AAVYRDDNGQFGAGVSYQSDVALQASSTLKYTQPLQNDTKLQYDAILYYASLDGVSRRAGQPNESIIVSASAAWSVGRWG
LSAAFEKVIHNLGYTVNTDIGYPFSLSMDRNYEGMWSYQLGASYNLLPNVNLMLMPIYTDGWEDSRRNVRVQGLGIMGVL
SGRITSGPLAGLTAFIAADRTREKRQGSHLGDRLNYWDIKGGIQYDFVLK

Specific function: Enhances the activity of the uidB (gusB) glucuronide transporter, on its own however it has no transport activity. Glucuronide transport does not occur in strain K12 due to a variant at position 100 of the uidB (gusB, AC P30868) protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081946, Length=422, Percent_Identity=53.0805687203791, Blast_Score=441, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005318 [H]

Pfam domain/function: PF03573 OprD [H]

EC number: NA

Molecular weight: Translated: 50261; Mature: 50130

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYRQAVFCKIACHHRNKYATLYYFHRDIKMEIKIKIICLGLLGAVMMPPLGYAAAPQDD
CCCCCEEEEEEEEECCCCEEEEEEEEECEEEEEEEEEEEEHHHHHHHCCCCCCCCCCCCC
EDYIRLRLRNDLRRADKPSAGSGRDVYAWVQGAMLDVNSHYYRDIIGVEGGAYYVYKLGT
HHHEEEEEHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCCEEHEEECCCCEEEEEEECC
RASASSRFYLDGHDSFGYALGAVKVKLGEYSKLKIGRFGTDALYGSLPYSVPMIDGASNR
CCCCCCEEEEECCCCCCEEEEEEEEEECCCCEEEECCCCCHHHHCCCCCEEEEECCCCCC
TLPVVSEGAMGQFALSEHVDLWMLYRQRVFTAFDADKGVRYEGVLNPLTGEFDMHRPLGA
EEEEEECCCCCCCHHHHCCHHHHHHHHHHHEEECCCCCCEEECCCCCCCCCCCCCCCCCE
VAAVYRDDNGQFGAGVSYQSDVALQASSTLKYTQPLQNDTKLQYDAILYYASLDGVSRRA
EEEEEECCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCEEEEEEEEEEECCCHHHHC
GQPNESIIVSASAAWSVGRWGLSAAFEKVIHNLGYTVNTDIGYPFSLSMDRNYEGMWSYQ
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCCCEEEEE
LGASYNLLPNVNLMLMPIYTDGWEDSRRNVRVQGLGIMGVLSGRITSGPLAGLTAFIAAD
CCCCEEECCCCCEEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHCC
RTREKRQGSHLGDRLNYWDIKGGIQYDFVLK
CHHHHHCCCCCCCCCCEEEECCCEEEEEEEC
>Mature Secondary Structure 
TYRQAVFCKIACHHRNKYATLYYFHRDIKMEIKIKIICLGLLGAVMMPPLGYAAAPQDD
CCCCEEEEEEEEECCCCEEEEEEEEECEEEEEEEEEEEEHHHHHHHCCCCCCCCCCCCC
EDYIRLRLRNDLRRADKPSAGSGRDVYAWVQGAMLDVNSHYYRDIIGVEGGAYYVYKLGT
HHHEEEEEHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCCEEHEEECCCCEEEEEEECC
RASASSRFYLDGHDSFGYALGAVKVKLGEYSKLKIGRFGTDALYGSLPYSVPMIDGASNR
CCCCCCEEEEECCCCCCEEEEEEEEEECCCCEEEECCCCCHHHHCCCCCEEEEECCCCCC
TLPVVSEGAMGQFALSEHVDLWMLYRQRVFTAFDADKGVRYEGVLNPLTGEFDMHRPLGA
EEEEEECCCCCCCHHHHCCHHHHHHHHHHHEEECCCCCCEEECCCCCCCCCCCCCCCCCE
VAAVYRDDNGQFGAGVSYQSDVALQASSTLKYTQPLQNDTKLQYDAILYYASLDGVSRRA
EEEEEECCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCEEEEEEEEEEECCCHHHHC
GQPNESIIVSASAAWSVGRWGLSAAFEKVIHNLGYTVNTDIGYPFSLSMDRNYEGMWSYQ
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCCCEEEEE
LGASYNLLPNVNLMLMPIYTDGWEDSRRNVRVQGLGIMGVLSGRITSGPLAGLTAFIAAD
CCCCEEECCCCCEEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHCC
RTREKRQGSHLGDRLNYWDIKGGIQYDFVLK
CHHHHHCCCCCCCCCCEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]