Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921236
Identifier: 238921236
GI number: 238921236
Start: 3269376
End: 3269519
Strand: Reverse
Name: 238921236
Synonym: NT01EI_3379
Alternate gene names: NA
Gene position: 3269519-3269376 (Counterclockwise)
Preceding gene: 238921237
Following gene: 238921235
Centisome position: 85.76
GC content: 61.81
Gene sequence:
>144_bases TTGTCGGCGATCACGCCGGCCTGTACCGTTGCGGGCCGTCCCCGGGAGATATGGCGCTGTATCACTCAGGCTGCGGCCTG TTGTCATAGCCGACGGCGCGGTGTCGCCCGGTTTAACCGTTTTGCAATCATGGCGGATCAATGA
Upstream 100 bases:
>100_bases CGGTCCTGCATCGGGGCATGTGTCGGCAACGAAATTCACTGCGCTTCCTGTTACACTCTTAGCTGCTGTTCCCTCACCGG GCATCGTTATCCCAGGACAG
Downstream 100 bases:
>100_bases AAGTCATCAATCAGGTAGCAGAGCAACGCAAGGCGCTGGAAGAGGCCGTGGCGCAGGCGCTGACGCTGGCGCAGGCCGGG GCGGATGCGGCAGAAGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MSAITPACTVAGRPREIWRCITQAAACCHSRRRGVARFNRFAIMADQ
Sequences:
>Translated_47_residues MSAITPACTVAGRPREIWRCITQAAACCHSRRRGVARFNRFAIMADQ >Mature_46_residues SAITPACTVAGRPREIWRCITQAAACCHSRRRGVARFNRFAIMADQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5251; Mature: 5120
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 12.8 %Cys+Met (Translated Protein) 8.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 10.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAITPACTVAGRPREIWRCITQAAACCHSRRRGVARFNRFAIMADQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC >Mature Secondary Structure SAITPACTVAGRPREIWRCITQAAACCHSRRRGVARFNRFAIMADQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA