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The map label for this gene is yidJ [H]

Identifier: 238921229

GI number: 238921229

Start: 3258952

End: 3260586

Strand: Direct

Name: yidJ [H]

Synonym: NT01EI_3372

Alternate gene names: 238921229

Gene position: 3258952-3260586 (Clockwise)

Preceding gene: 238921228

Following gene: 238921233

Centisome position: 85.48

GC content: 62.51

Gene sequence:

>1635_bases
ATGTCTCTTTCTCGACGCGAATTTTTACAGCGAACTGCCGGCGGGATGGCCGGGGTCGCCCTCGGTGCGCCCGCGCTGGC
CACCGGCGATGCCACCGCCGGTACGGGTACGGGCGCCAAGCCCCCCCCGCGCAATATCGTCATCATCACCGCCGATCAGC
TGGCACGGCGCGGCGTGGGGGGCTATGGCAATCCCCACGTCAACACCCCGGCCATCGACAGCCTGATCGCCCGCGGCACC
CGCTTTGAACAAGCCTACTGTCCCTACCCGCTGTGCGCCCCGTCACGCGCCTGCTACTGGACCGGCCGCCTGCCCCATCA
GACCGGGGTGATCGCCAACGACAGCCCCAACCTCCCGCAGGATATGGTGACGCTGGGCGAACTGTTCAGCCGGGCAGGCT
ATGAGTGTCGCCACTTTGGTAAGCGTCACGACTACGGCGCGCTCAAGGGGTTCACCTGCGCCGACCAGATCGAGCTGCCC
TACGACAGCCCGGCCGCCTACCCGGTCGATTATGATACCCGTGAGGATGTCTACTGCCTGCAGGAGAGCCTGAAGTATAT
CGATACCCTGAAGGGGCGCGGCGCCGACGCACCGTTTATGCTGGCGATCGAATTCAATAATCCCCATAACATCAACGGCT
GGACCGGGGCTTTTGCCGGCCCGCACGGCGATATCGACGGTCTGGGAACGCTGCCGCCGCTGCTGGACAATTTTGATACC
TCAGCCGATCTGCCCAACCGCCCCCTGGCGATTCAATATGCCTGCTGCACCCATAACCGGGTGATGCAGGCCGCCAACTG
GAGCCCGCTCAACTTTCGTCAGTATCTCAAGGCCTACTATCACTTCACTGAGCTGGCCGATGGTTTTATCGGCCAGGTGC
TGAGCGCGCTGCGCGCCAGCGGCCATGCGGACGATACCCTGGTGGTCTTCTTTGCCGATCACGGCGATGCCATGGGCGCC
CACCGTCTGGTGGCCAAGATGAACTGGTTCTATGAAGAGTCCACCAACGTGCCGCTGATTTTCGCCGGCCCCGGTATCCG
TCCCCACTCCAGCAGCCGCCACCTGACCTCCCTGTGCGATCTGCTGCCGACCCTGTGCGACTACGCGGGGCTGACACCAC
CGCCCGGCCTGTACGGCCGCTCCCTGCTGCCGATCCTGCGCGGCGAGCAGCCCGACACGTGGCGCGATGAGGTCATTACC
CAGTGGAACACCGATCGCAATGTGGATGTACAACCGGCGCGCATGCTACGCACGGACAGATATAAATATATAATTTATAA
AGAGAATGAAGAGGAAGAACTCTACGACCTGCAACAGGATCCAGGGGAAACCCACAATCTGGCACACTCGGCGGAACATC
AGGAACAGCGTCAGGCGCTGCGCGCCCGTTTCGATGACTATGTGCGCAATCAGATCGACCCCTTCTACAGCCAGGAGGCC
ATCATCGACCGGCGCTGGCGCAGCCACCTGCCCGGCTACCATAACCATCAGGGACAGACCAGCATCCAGGTCTACCAGAA
GGAGATCCGCCCACTGATCATGAATAAGGAGTTTGAAAAGGCGCGCGAGGTCCGCCTGGCGCTCTACCGGCAGGCCCGCG
CCTCGTATGGCGGCGGGTGTGATCGCGATGCATGA

Upstream 100 bases:

>100_bases
CTTTCCTTTACTTTTGATTGTGCGTTATGCGATCGATATCGCGGTGAAGCATTCTTTCGAATTGTTATCTTTGCTTTCGA
ACAATAAAAAGGAACCGACT

Downstream 100 bases:

>100_bases
AAAAGGCCGGGCGTCTGCCCGGCCTTACCCGTTCAGCGGACGTTACTTCTTCGCCGCCTGGATATACAGCATCTCCAGCG
CCAGCGTCGCCGCCGCCAGG

Product: sulfatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 543

Protein sequence:

>544_residues
MSLSRREFLQRTAGGMAGVALGAPALATGDATAGTGTGAKPPPRNIVIITADQLARRGVGGYGNPHVNTPAIDSLIARGT
RFEQAYCPYPLCAPSRACYWTGRLPHQTGVIANDSPNLPQDMVTLGELFSRAGYECRHFGKRHDYGALKGFTCADQIELP
YDSPAAYPVDYDTREDVYCLQESLKYIDTLKGRGADAPFMLAIEFNNPHNINGWTGAFAGPHGDIDGLGTLPPLLDNFDT
SADLPNRPLAIQYACCTHNRVMQAANWSPLNFRQYLKAYYHFTELADGFIGQVLSALRASGHADDTLVVFFADHGDAMGA
HRLVAKMNWFYEESTNVPLIFAGPGIRPHSSSRHLTSLCDLLPTLCDYAGLTPPPGLYGRSLLPILRGEQPDTWRDEVIT
QWNTDRNVDVQPARMLRTDRYKYIIYKENEEEELYDLQQDPGETHNLAHSAEHQEQRQALRARFDDYVRNQIDPFYSQEA
IIDRRWRSHLPGYHNHQGQTSIQVYQKEIRPLIMNKEFEKAREVRLALYRQARASYGGGCDRDA

Sequences:

>Translated_544_residues
MSLSRREFLQRTAGGMAGVALGAPALATGDATAGTGTGAKPPPRNIVIITADQLARRGVGGYGNPHVNTPAIDSLIARGT
RFEQAYCPYPLCAPSRACYWTGRLPHQTGVIANDSPNLPQDMVTLGELFSRAGYECRHFGKRHDYGALKGFTCADQIELP
YDSPAAYPVDYDTREDVYCLQESLKYIDTLKGRGADAPFMLAIEFNNPHNINGWTGAFAGPHGDIDGLGTLPPLLDNFDT
SADLPNRPLAIQYACCTHNRVMQAANWSPLNFRQYLKAYYHFTELADGFIGQVLSALRASGHADDTLVVFFADHGDAMGA
HRLVAKMNWFYEESTNVPLIFAGPGIRPHSSSRHLTSLCDLLPTLCDYAGLTPPPGLYGRSLLPILRGEQPDTWRDEVIT
QWNTDRNVDVQPARMLRTDRYKYIIYKENEEEELYDLQQDPGETHNLAHSAEHQEQRQALRARFDDYVRNQIDPFYSQEA
IIDRRWRSHLPGYHNHQGQTSIQVYQKEIRPLIMNKEFEKAREVRLALYRQARASYGGGCDRDA
>Mature_543_residues
SLSRREFLQRTAGGMAGVALGAPALATGDATAGTGTGAKPPPRNIVIITADQLARRGVGGYGNPHVNTPAIDSLIARGTR
FEQAYCPYPLCAPSRACYWTGRLPHQTGVIANDSPNLPQDMVTLGELFSRAGYECRHFGKRHDYGALKGFTCADQIELPY
DSPAAYPVDYDTREDVYCLQESLKYIDTLKGRGADAPFMLAIEFNNPHNINGWTGAFAGPHGDIDGLGTLPPLLDNFDTS
ADLPNRPLAIQYACCTHNRVMQAANWSPLNFRQYLKAYYHFTELADGFIGQVLSALRASGHADDTLVVFFADHGDAMGAH
RLVAKMNWFYEESTNVPLIFAGPGIRPHSSSRHLTSLCDLLPTLCDYAGLTPPPGLYGRSLLPILRGEQPDTWRDEVITQ
WNTDRNVDVQPARMLRTDRYKYIIYKENEEEELYDLQQDPGETHNLAHSAEHQEQRQALRARFDDYVRNQIDPFYSQEAI
IDRRWRSHLPGYHNHQGQTSIQVYQKEIRPLIMNKEFEKAREVRLALYRQARASYGGGCDRDA

Specific function: Unknown

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfatase family [H]

Homologues:

Organism=Homo sapiens, GI39930577, Length=444, Percent_Identity=27.7027027027027, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI146229331, Length=466, Percent_Identity=26.3948497854077, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI146229329, Length=466, Percent_Identity=26.3948497854077, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI6005990, Length=466, Percent_Identity=26.3948497854077, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI146229324, Length=466, Percent_Identity=26.3948497854077, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI4504061, Length=408, Percent_Identity=26.7156862745098, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI189571643, Length=412, Percent_Identity=23.7864077669903, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI189571641, Length=412, Percent_Identity=23.7864077669903, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI189571638, Length=412, Percent_Identity=23.7864077669903, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI189571636, Length=412, Percent_Identity=23.7864077669903, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI4503899, Length=125, Percent_Identity=35.2, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI31742482, Length=140, Percent_Identity=33.5714285714286, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI53831991, Length=109, Percent_Identity=35.7798165137615, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI71852586, Length=132, Percent_Identity=34.0909090909091, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI71852584, Length=122, Percent_Identity=34.4262295081967, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI58743319, Length=123, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1790112, Length=476, Percent_Identity=27.7310924369748, Blast_Score=139, Evalue=6e-34,
Organism=Caenorhabditis elegans, GI17559078, Length=116, Percent_Identity=37.9310344827586, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21356831, Length=516, Percent_Identity=25.1937984496124, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24647401, Length=399, Percent_Identity=23.0576441102757, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI281366397, Length=145, Percent_Identity=35.8620689655172, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281366395, Length=145, Percent_Identity=35.8620689655172, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24666163, Length=145, Percent_Identity=35.8620689655172, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24666175, Length=115, Percent_Identity=40, Blast_Score=70, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: 3.1.6.- [C]

Molecular weight: Translated: 60897; Mature: 60766

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSRREFLQRTAGGMAGVALGAPALATGDATAGTGTGAKPPPRNIVIITADQLARRGVG
CCCHHHHHHHHHCCCCCHHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCC
GYGNPHVNTPAIDSLIARGTRFEQAYCPYPLCAPSRACYWTGRLPHQTGVIANDSPNLPQ
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCH
DMVTLGELFSRAGYECRHFGKRHDYGALKGFTCADQIELPYDSPAAYPVDYDTREDVYCL
HHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
QESLKYIDTLKGRGADAPFMLAIEFNNPHNINGWTGAFAGPHGDIDGLGTLPPLLDNFDT
HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
SADLPNRPLAIQYACCTHNRVMQAANWSPLNFRQYLKAYYHFTELADGFIGQVLSALRAS
CCCCCCCCEEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHADDTLVVFFADHGDAMGAHRLVAKMNWFYEESTNVPLIFAGPGIRPHSSSRHLTSLCD
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHEECCCCCCEEEECCCCCCCCCCHHHHHHHH
LLPTLCDYAGLTPPPGLYGRSLLPILRGEQPDTWRDEVITQWNTDRNVDVQPARMLRTDR
HHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCC
YKYIIYKENEEEELYDLQQDPGETHNLAHSAEHQEQRQALRARFDDYVRNQIDPFYSQEA
EEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IIDRRWRSHLPGYHNHQGQTSIQVYQKEIRPLIMNKEFEKAREVRLALYRQARASYGGGC
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
DRDA
CCCC
>Mature Secondary Structure 
SLSRREFLQRTAGGMAGVALGAPALATGDATAGTGTGAKPPPRNIVIITADQLARRGVG
CCHHHHHHHHHCCCCCHHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCC
GYGNPHVNTPAIDSLIARGTRFEQAYCPYPLCAPSRACYWTGRLPHQTGVIANDSPNLPQ
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCH
DMVTLGELFSRAGYECRHFGKRHDYGALKGFTCADQIELPYDSPAAYPVDYDTREDVYCL
HHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
QESLKYIDTLKGRGADAPFMLAIEFNNPHNINGWTGAFAGPHGDIDGLGTLPPLLDNFDT
HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
SADLPNRPLAIQYACCTHNRVMQAANWSPLNFRQYLKAYYHFTELADGFIGQVLSALRAS
CCCCCCCCEEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHADDTLVVFFADHGDAMGAHRLVAKMNWFYEESTNVPLIFAGPGIRPHSSSRHLTSLCD
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHEECCCCCCEEEECCCCCCCCCCHHHHHHHH
LLPTLCDYAGLTPPPGLYGRSLLPILRGEQPDTWRDEVITQWNTDRNVDVQPARMLRTDR
HHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCC
YKYIIYKENEEEELYDLQQDPGETHNLAHSAEHQEQRQALRARFDDYVRNQIDPFYSQEA
EEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IIDRRWRSHLPGYHNHQGQTSIQVYQKEIRPLIMNKEFEKAREVRLALYRQARASYGGGC
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
DRDA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Sulfuric ester hydrolases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]