| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238921172
Identifier: 238921172
GI number: 238921172
Start: 3197552
End: 3198046
Strand: Direct
Name: 238921172
Synonym: NT01EI_3313
Alternate gene names: NA
Gene position: 3197552-3198046 (Clockwise)
Preceding gene: 238921162
Following gene: 238921176
Centisome position: 83.87
GC content: 40.0
Gene sequence:
>495_bases ATGGTAACCTATCTGGCTTACAAAGGGGTGGATGCTGTAGTTGAGCGGGACTCTTTATTGAAAGAGAGGGATATTGAAGT ACGGCTAAATGAAATCAAGCAAGATACAATGATAGACGATCGGTTTAAACAGGTATTTGGCCACAAGACGTCAAATCCCA CAGATTATATTGAGAAGCTAACAGATAATCAGGCATCTGATATTCTTTATGGTGGGAGTAGCAACTTAGAAAGAGTGGCG CTTGCGATAAACAATACCAAATCAAAATTTGGCCTGGATGAAGGCACATGTATGTTGTTACGAAAAGATATTTTATACTT ATCTTTGGGGCTTACCTCTTCCGAGGAGAAGCAAAAAATGTTTAATGTTAATGGCAGTTCCGCATGGACTCTTTCCCTAT ATCACAGCCTTTCAATAAATGAAGAAGAATGCGATGCTGTGACAAATGCTGCTCTTGAGGTAATGGAGGTTCCGAATCAC CCTTTACCATCCTAA
Upstream 100 bases:
>100_bases GGTGGGGCTTTTAGCTCTTGGAGCGGCTCAGGCTAAATTGTTGTATAACAGCATCTCTAATGGCGAAGTTATTAACAGTA TGAAGCTATTAGGTTCTAGC
Downstream 100 bases:
>100_bases AATCTGGTGATACATCCAATTAAAGCCGCTAACAAAACCGAGTTGATTCGAATAACGCCAATCCCCACATAGCAGGCATG ACACGAAAAATCATCGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MVTYLAYKGVDAVVERDSLLKERDIEVRLNEIKQDTMIDDRFKQVFGHKTSNPTDYIEKLTDNQASDILYGGSSNLERVA LAINNTKSKFGLDEGTCMLLRKDILYLSLGLTSSEEKQKMFNVNGSSAWTLSLYHSLSINEEECDAVTNAALEVMEVPNH PLPS
Sequences:
>Translated_164_residues MVTYLAYKGVDAVVERDSLLKERDIEVRLNEIKQDTMIDDRFKQVFGHKTSNPTDYIEKLTDNQASDILYGGSSNLERVA LAINNTKSKFGLDEGTCMLLRKDILYLSLGLTSSEEKQKMFNVNGSSAWTLSLYHSLSINEEECDAVTNAALEVMEVPNH PLPS >Mature_164_residues MVTYLAYKGVDAVVERDSLLKERDIEVRLNEIKQDTMIDDRFKQVFGHKTSNPTDYIEKLTDNQASDILYGGSSNLERVA LAINNTKSKFGLDEGTCMLLRKDILYLSLGLTSSEEKQKMFNVNGSSAWTLSLYHSLSINEEECDAVTNAALEVMEVPNH PLPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18410; Mature: 18410
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTYLAYKGVDAVVERDSLLKERDIEVRLNEIKQDTMIDDRFKQVFGHKTSNPTDYIEKL CEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TDNQASDILYGGSSNLERVALAINNTKSKFGLDEGTCMLLRKDILYLSLGLTSSEEKQKM CCCCCCCEEECCCCCCEEEEEEECCCCHHCCCCCCHHHHHHHCCCEEEECCCCCHHHHHH FNVNGSSAWTLSLYHSLSINEEECDAVTNAALEVMEVPNHPLPS CCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MVTYLAYKGVDAVVERDSLLKERDIEVRLNEIKQDTMIDDRFKQVFGHKTSNPTDYIEKL CEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TDNQASDILYGGSSNLERVALAINNTKSKFGLDEGTCMLLRKDILYLSLGLTSSEEKQKM CCCCCCCEEECCCCCCEEEEEEECCCCHHCCCCCCHHHHHHHCCCEEEECCCCCHHHHHH FNVNGSSAWTLSLYHSLSINEEECDAVTNAALEVMEVPNHPLPS CCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA