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The map label for this gene is ydiY [H]

Identifier: 238921083

GI number: 238921083

Start: 3096395

End: 3097126

Strand: Direct

Name: ydiY [H]

Synonym: NT01EI_3218

Alternate gene names: 238921083

Gene position: 3096395-3097126 (Clockwise)

Preceding gene: 238921082

Following gene: 238921084

Centisome position: 81.22

GC content: 55.19

Gene sequence:

>732_bases
ATGGGCATTACCACTGTGCTGTACGGCATCAATGCCTGTGCCGATAGCACCCTGTTTACCGCGTTAGACGATCCGTCAAC
AGCAAAACAGCCTTTTACCGGAAATATACAGGCCGGTTATAATTCACAGTCAGGAAACAGCAATAACGCCAGCCTGCTTG
CCGATACTACCATGACCTGGTTTAACCGGGAGGCTGCTACTGCCTATAGTCTGTGGGGCACGGCTAACAATGCCGAGTCT
AACGGTACACGTTCCGCTGAAAAATACCAAGCCGGCGCCCGCACCCGCTATAATGTCACGACCGATAACTATATGTTCGG
GCAGGTTAACTGGCTGAACGATCGCTTTGCTGGCTACGCCTCCCGCACCACCGGTACCGCAGGCTATGGGCGCCAGCTCT
TCTCCTCGCCATCGCAGGATCTGCGCGTCGAATTCGGTCCAGGCATCCGCCATGACGAGTATCGGGAAGGGGGACGATCC
ACCCGGGCGCTGGCCTACGGCGCCGCGAACTATACCTATCAGCTCACCAAGAACACCCAGTTTACCCAGGGAGTCTCTGC
ACTCTCTAATGAAGATACCTCTCTCAACTCGGAAACGGCGCTCAACGTCGGTATTAACGATGCCTTCTCGCTGCGTCTCT
CCTATAACGTAACCTACAATAGTGAACCACCGGCCAGCGCGCCCAAACACACCGACCGTACCAGCGCAATCACCCTACGG
TACAATCTGTAA

Upstream 100 bases:

>100_bases
TCACCCGCTATAATGAGACGTACATCAACTTTGGCAAAATCCCTATTTTACTGGAAACATCATGCTCCGCTTATGTGTCC
CCCGTTCACTGCCGATCCTC

Downstream 100 bases:

>100_bases
ACACCGCCCTCCCCCCGGGAGGGTACGAGCGCCGCGAGTCAATCGTGGCACACCTGACACGACCTTACCCTTCTTATACT
TTCTTTACACCGCAACTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MGITTVLYGINACADSTLFTALDDPSTAKQPFTGNIQAGYNSQSGNSNNASLLADTTMTWFNREAATAYSLWGTANNAES
NGTRSAEKYQAGARTRYNVTTDNYMFGQVNWLNDRFAGYASRTTGTAGYGRQLFSSPSQDLRVEFGPGIRHDEYREGGRS
TRALAYGAANYTYQLTKNTQFTQGVSALSNEDTSLNSETALNVGINDAFSLRLSYNVTYNSEPPASAPKHTDRTSAITLR
YNL

Sequences:

>Translated_243_residues
MGITTVLYGINACADSTLFTALDDPSTAKQPFTGNIQAGYNSQSGNSNNASLLADTTMTWFNREAATAYSLWGTANNAES
NGTRSAEKYQAGARTRYNVTTDNYMFGQVNWLNDRFAGYASRTTGTAGYGRQLFSSPSQDLRVEFGPGIRHDEYREGGRS
TRALAYGAANYTYQLTKNTQFTQGVSALSNEDTSLNSETALNVGINDAFSLRLSYNVTYNSEPPASAPKHTDRTSAITLR
YNL
>Mature_242_residues
GITTVLYGINACADSTLFTALDDPSTAKQPFTGNIQAGYNSQSGNSNNASLLADTTMTWFNREAATAYSLWGTANNAESN
GTRSAEKYQAGARTRYNVTTDNYMFGQVNWLNDRFAGYASRTTGTAGYGRQLFSSPSQDLRVEFGPGIRHDEYREGGRST
RALAYGAANYTYQLTKNTQFTQGVSALSNEDTSLNSETALNVGINDAFSLRLSYNVTYNSEPPASAPKHTDRTSAITLRY
NL

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=234, Percent_Identity=54.2735042735043, Blast_Score=275, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 26465; Mature: 26334

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGITTVLYGINACADSTLFTALDDPSTAKQPFTGNIQAGYNSQSGNSNNASLLADTTMTW
CCCEEEEEEHHHCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCHHH
FNREAATAYSLWGTANNAESNGTRSAEKYQAGARTRYNVTTDNYMFGQVNWLNDRFAGYA
HCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEEECCCEEEEEEEECCCHHCCCC
SRTTGTAGYGRQLFSSPSQDLRVEFGPGIRHDEYREGGRSTRALAYGAANYTYQLTKNTQ
CCCCCCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCEEEEEECCCEEEEEECCCC
FTQGVSALSNEDTSLNSETALNVGINDAFSLRLSYNVTYNSEPPASAPKHTDRTSAITLR
HHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEE
YNL
EEC
>Mature Secondary Structure 
GITTVLYGINACADSTLFTALDDPSTAKQPFTGNIQAGYNSQSGNSNNASLLADTTMTW
CCEEEEEEHHHCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCHHH
FNREAATAYSLWGTANNAESNGTRSAEKYQAGARTRYNVTTDNYMFGQVNWLNDRFAGYA
HCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEEECCCEEEEEEEECCCHHCCCC
SRTTGTAGYGRQLFSSPSQDLRVEFGPGIRHDEYREGGRSTRALAYGAANYTYQLTKNTQ
CCCCCCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCEEEEEECCCEEEEEECCCC
FTQGVSALSNEDTSLNSETALNVGINDAFSLRLSYNVTYNSEPPASAPKHTDRTSAITLR
HHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEE
YNL
EEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]