Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
---|---|
Accession | NC_012779 |
Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238921009
Identifier: 238921009
GI number: 238921009
Start: 3020273
End: 3020569
Strand: Direct
Name: 238921009
Synonym: NT01EI_3139
Alternate gene names: NA
Gene position: 3020273-3020569 (Clockwise)
Preceding gene: 238921008
Following gene: 238921010
Centisome position: 79.22
GC content: 58.59
Gene sequence:
>297_bases ATGAGCGAACGTAAGAGCGTTACCCTGAATACTCCCCTGAAACGCGGTGAAACCGAATTTAGCGAGTTTCAGATCCGCAA ACCGCTGGGCGGCGACCTGCGCGGCGTCAGTCTGGTGGAGCTGCTCAGCCTCAACGTCGACGCACTCACCACCGTTCTGC CGCGCATCACTGCGCCGGCGCTGAATAAGCATGAAGTGGCGCAACTGGATTTTATCGACCTGACGGCCTTCGGTACGGCG GTGATCGGTTTTTTGCCACAGACCTCGCCGGAAGCAACGGATACCCCGGACGAATAG
Upstream 100 bases:
>100_bases AGCCATCATTGAAATCGACACTGTGAATTTTATTGAAAACATCGACGGTAAAGACCGTATTGCCGACGCACGCCGGGCCA TTGGCCTGTAAGGATAAACC
Downstream 100 bases:
>100_bases AAGAGGCGCAGGGAGACATCGCCGTTATCTTTCACTGGCCGCTGGCGGCGCTGGACGCCTTAACACTCCATGAAACCCTT TACTGGCGGGAACAGGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Tail Protein; Phage Tail E Family Protein; Phage Tail Protein E; Phage P2 GpE-Like Tail Protein; Phage-Related Tail Protein; Tail Bacteriophage; Prophage Tail Protein; GpE+E; Phage Tail E; Bacteriophage-Related Tail Protein; Phage Related Tail Protein; Gp28 Phage Tail Protein E; Tail Protein E; Phage Protein; Tail Protein
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSERKSVTLNTPLKRGETEFSEFQIRKPLGGDLRGVSLVELLSLNVDALTTVLPRITAPALNKHEVAQLDFIDLTAFGTA VIGFLPQTSPEATDTPDE
Sequences:
>Translated_98_residues MSERKSVTLNTPLKRGETEFSEFQIRKPLGGDLRGVSLVELLSLNVDALTTVLPRITAPALNKHEVAQLDFIDLTAFGTA VIGFLPQTSPEATDTPDE >Mature_97_residues SERKSVTLNTPLKRGETEFSEFQIRKPLGGDLRGVSLVELLSLNVDALTTVLPRITAPALNKHEVAQLDFIDLTAFGTAV IGFLPQTSPEATDTPDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10651; Mature: 10520
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERKSVTLNTPLKRGETEFSEFQIRKPLGGDLRGVSLVELLSLNVDALTTVLPRITAPA CCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC LNKHEVAQLDFIDLTAFGTAVIGFLPQTSPEATDTPDE CCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SERKSVTLNTPLKRGETEFSEFQIRKPLGGDLRGVSLVELLSLNVDALTTVLPRITAPA CCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC LNKHEVAQLDFIDLTAFGTAVIGFLPQTSPEATDTPDE CCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA