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The map label for this gene is 238920989

Identifier: 238920989

GI number: 238920989

Start: 3007143

End: 3007970

Strand: Direct

Name: 238920989

Synonym: NT01EI_3119

Alternate gene names: NA

Gene position: 3007143-3007970 (Clockwise)

Preceding gene: 238920986

Following gene: 238920990

Centisome position: 78.88

GC content: 57.49

Gene sequence:

>828_bases
ATGGACAAAAAGCCGAAGAAAAAACTGCTATCCAAATGGGTGCGCATCGGTGTGGAAGGTGCCACCTGCGATCGGCGCAA
CCTTGAACGCCAGTGGCTCGAACAAATGGCCGCCGCCTACGATCCGAAGGTTTACGGCGCGCGCATCAATCTCGAACACC
TGAAAGGCATCCTACCGGACGGCCCATTCCAGCGTTACGGCGATGTCGCCATGCTGAAAACCGAAGAGATCGCCGAAGAA
GGATTACTGAAGGGCAAGCTGGCGCTGTACGCCCGACTGGTCCCGACTGACCAGCTGATTGAAATGAACCGCAAGGGACA
GAAGGTTTACTCCTCAATTGAGGTCGACCCCAAATTTGCCGATACCGGCAAAGCCTATCTGGTCGGTCTGGCGGTCACTG
ACGATCCGGCCAGCCTCGGCACCGAAATGCTCTCCTTCTGCGCCGGCGCACAAAGCAACCCGTTGGCATCGCGCAAACGC
TCGCCGGACAACGTCTTCAGCGTGGCGATCGAAACCGAACTGGAATTTGAAGAGGTGGAAGAACGCGGCGGTGAAACGCT
GTTTACCCGCATCAGGGCGCTGTTAAGTAAAAAGCAAAACCGCGACGACCAGCAAATGGCCGATGTCCATCAAGCCGTGG
AGGAAGTGGCCTCGTTCTGTGGCGAACAGGTCGACCAGATCCGTAGCGAACTGACGGAACTGCAGATGCAGCATCAGCAG
CTACAGACCGACTATTCCGCGCTGAAAACCCTGCTTGCAAAACAGCCAGCTACGCTGCCGCGCCAGCCCGCCACCGGTGG
GGGCACCGACCTGAAAACCGACTGTTAA

Upstream 100 bases:

>100_bases
ATACCACTTGTAACCCCGGTGACTACAAGCAAAGCCCGTTGCCTGATCACGGAGGACTACCCGACCATTCGCTTATTTAG
CCAACGCCGGGACGGAAGTT

Downstream 100 bases:

>100_bases
GGAAGCACCGATGCGTAACGAAACCCGCTTAAAATATAACGCTTACGTTGAAACCATCGCCGGGTTATCCGGCATACAGA
GCGCCGCCGTTGAATTCACC

Product: phage capsid scaffolding protein GpO

Products: NA

Alternate protein names: Capsid Scaffolding; Capsid Scaffolding Protein; Phage Capsid Scaffolding; Capsid Scaffolding Protein O; Phage Capsid Scaffolding Protein GpO; Phage-Related Capsid Scaffolding Protein; V Protein Bacteriophage; Scaffold Protein; Presumed Capsid-Scaffolding Protein; Capsid Scaffolding Protein Bacteriophage Origin; Bacteriophage Protein; Bacteriophage P2 GPO Capsid Protein; Scaffold; Capsid Protein; Presumed Capsid Scaffolding Protein; Capsid Scafolding Protein; Phage-Related Capsid Scaffold Protein; Phage-Related Capsid Scaffold Bacteriophage Protein; Phage P2 Capsid Scaffolding GpO-Like Protein; Prophage Capsid Scaffolding Protein; Flagellar Biosynthesis/Type III Secretory Pathway Protein

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MDKKPKKKLLSKWVRIGVEGATCDRRNLERQWLEQMAAAYDPKVYGARINLEHLKGILPDGPFQRYGDVAMLKTEEIAEE
GLLKGKLALYARLVPTDQLIEMNRKGQKVYSSIEVDPKFADTGKAYLVGLAVTDDPASLGTEMLSFCAGAQSNPLASRKR
SPDNVFSVAIETELEFEEVEERGGETLFTRIRALLSKKQNRDDQQMADVHQAVEEVASFCGEQVDQIRSELTELQMQHQQ
LQTDYSALKTLLAKQPATLPRQPATGGGTDLKTDC

Sequences:

>Translated_275_residues
MDKKPKKKLLSKWVRIGVEGATCDRRNLERQWLEQMAAAYDPKVYGARINLEHLKGILPDGPFQRYGDVAMLKTEEIAEE
GLLKGKLALYARLVPTDQLIEMNRKGQKVYSSIEVDPKFADTGKAYLVGLAVTDDPASLGTEMLSFCAGAQSNPLASRKR
SPDNVFSVAIETELEFEEVEERGGETLFTRIRALLSKKQNRDDQQMADVHQAVEEVASFCGEQVDQIRSELTELQMQHQQ
LQTDYSALKTLLAKQPATLPRQPATGGGTDLKTDC
>Mature_275_residues
MDKKPKKKLLSKWVRIGVEGATCDRRNLERQWLEQMAAAYDPKVYGARINLEHLKGILPDGPFQRYGDVAMLKTEEIAEE
GLLKGKLALYARLVPTDQLIEMNRKGQKVYSSIEVDPKFADTGKAYLVGLAVTDDPASLGTEMLSFCAGAQSNPLASRKR
SPDNVFSVAIETELEFEEVEERGGETLFTRIRALLSKKQNRDDQQMADVHQAVEEVASFCGEQVDQIRSELTELQMQHQQ
LQTDYSALKTLLAKQPATLPRQPATGGGTDLKTDC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30674; Mature: 30674

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKPKKKLLSKWVRIGVEGATCDRRNLERQWLEQMAAAYDPKVYGARINLEHLKGILPD
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCC
GPFQRYGDVAMLKTEEIAEEGLLKGKLALYARLVPTDQLIEMNRKGQKVYSSIEVDPKFA
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
DTGKAYLVGLAVTDDPASLGTEMLSFCAGAQSNPLASRKRSPDNVFSVAIETELEFEEVE
CCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHEEEEEECCCCHHHHH
ERGGETLFTRIRALLSKKQNRDDQQMADVHQAVEEVASFCGEQVDQIRSELTELQMQHQQ
HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQTDYSALKTLLAKQPATLPRQPATGGGTDLKTDC
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDKKPKKKLLSKWVRIGVEGATCDRRNLERQWLEQMAAAYDPKVYGARINLEHLKGILPD
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCC
GPFQRYGDVAMLKTEEIAEEGLLKGKLALYARLVPTDQLIEMNRKGQKVYSSIEVDPKFA
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
DTGKAYLVGLAVTDDPASLGTEMLSFCAGAQSNPLASRKRSPDNVFSVAIETELEFEEVE
CCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHEEEEEECCCCHHHHH
ERGGETLFTRIRALLSKKQNRDDQQMADVHQAVEEVASFCGEQVDQIRSELTELQMQHQQ
HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQTDYSALKTLLAKQPATLPRQPATGGGTDLKTDC
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA