Click here to switch to the map view.

The map label for this gene is 238920979

Identifier: 238920979

GI number: 238920979

Start: 2998760

End: 2998930

Strand: Direct

Name: 238920979

Synonym: NT01EI_3109

Alternate gene names: NA

Gene position: 2998760-2998930 (Clockwise)

Preceding gene: 238920978

Following gene: 238920980

Centisome position: 78.66

GC content: 64.91

Gene sequence:

>171_bases
ATGGGGATGACCGGTATCTCCCGAAGCCAGGTGTCATCCCTCTGCCACGGCATCGATGAGCGTGTGCAGGCGTTCCTGCA
GCGGCCGCTGGAAGGGGAGTGGCCCTACCTGTGGCTGGATGCGACCTACGTGAAGGTGCGCAAGAACGGGCGGGGGTCAG
CGTGGCGGTAA

Upstream 100 bases:

>100_bases
GACGCCCGCAGGCTGTCGGAGAAGGTGCTCAACGCGGTTATCCGGGAGGCATGGATAAACGGCATCTCGACCCGCAAGGT
TGACGCGACTGGTCCAGTCG

Downstream 100 bases:

>100_bases
TAATCGCCTGCGCGGTCAGCCCGGACGGTCGCCGGGAGATTATCGGGATGGGTATCGGTGAGTCAGAAGCCAAAGCGTTC
TGGCTGGCCTTCCTGCTGAG

Product: transposase

Products: NA

Alternate protein names: Transposase; Mutator Insertion Sequence Transposase Protein; Insertion Sequence Transposase Protein; ISRm25b Transposase; Transposase Mutator Family

Number of amino acids: Translated: 56; Mature: 55

Protein sequence:

>56_residues
MGMTGISRSQVSSLCHGIDERVQAFLQRPLEGEWPYLWLDATYVKVRKNGRGSAWR

Sequences:

>Translated_56_residues
MGMTGISRSQVSSLCHGIDERVQAFLQRPLEGEWPYLWLDATYVKVRKNGRGSAWR
>Mature_55_residues
GMTGISRSQVSSLCHGIDERVQAFLQRPLEGEWPYLWLDATYVKVRKNGRGSAWR

Specific function: Unknown

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6438; Mature: 6307

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMTGISRSQVSSLCHGIDERVQAFLQRPLEGEWPYLWLDATYVKVRKNGRGSAWR
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCCCCCCC
>Mature Secondary Structure 
GMTGISRSQVSSLCHGIDERVQAFLQRPLEGEWPYLWLDATYVKVRKNGRGSAWR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA