| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yjiG [H]
Identifier: 238920892
GI number: 238920892
Start: 2905667
End: 2906143
Strand: Direct
Name: yjiG [H]
Synonym: NT01EI_3019
Alternate gene names: 238920892
Gene position: 2905667-2906143 (Clockwise)
Preceding gene: 238920891
Following gene: 238920893
Centisome position: 76.22
GC content: 59.96
Gene sequence:
>477_bases ATGTCTGCACCTATTTCTACCTCCGCATCGAAGCCGATGATCACCGACGTCTTTGTCGCCGGTGCGCGTAAAGGCTGGAA TATTGCCACCACCAGCACCCTGCCCAACGTCTTGATGGCCTTTGTGCTGATCAAGGCGCTGGAGATCACCGGCGCCCTGA AAGGGATGGCACTGGTATTTGGCCCGCTGATGGGGCTGTTTGGCCTGCCGGGTGAGGCCGCTGCCGTACTGATCGGTGGT TGGATGTCCATGGGCGGTGGCGTGGGCGTTGCCGTGGCACTGTTCGACCAGGGTATCCTCACCGGGACCCATCTGGCGAT TCTGGCGCCGGCCATCTACCTGATGGGCTCCCAGATCCAGTATGCCGGGCGTATCCTCGGCGTTATTGGCACCGCCGCCA AACGTATTCCGGTGATGATCGGCATCTCCGTCATCAACGCCTTCATCGCCATGCTGCTCATGCGCGTAATTCTGTAA
Upstream 100 bases:
>100_bases TGATGAAAATCTTCGGCGCCAACCTGATGCGCCTGTACCTGCGCCTTACGACACGTAACAGCGCCAAAACTGCAACCCAT CCGGCACAGGGAGAAGCCTA
Downstream 100 bases:
>100_bases CTCAGGGAGAGATAGGATGATACAACTGGAACAGTATCTGGACGAACTGCGCAGCGTAGTCAACGTCGACTGCGGTACCC AGACCCGCGACGGGGTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSAPISTSASKPMITDVFVAGARKGWNIATTSTLPNVLMAFVLIKALEITGALKGMALVFGPLMGLFGLPGEAAAVLIGG WMSMGGGVGVAVALFDQGILTGTHLAILAPAIYLMGSQIQYAGRILGVIGTAAKRIPVMIGISVINAFIAMLLMRVIL
Sequences:
>Translated_158_residues MSAPISTSASKPMITDVFVAGARKGWNIATTSTLPNVLMAFVLIKALEITGALKGMALVFGPLMGLFGLPGEAAAVLIGG WMSMGGGVGVAVALFDQGILTGTHLAILAPAIYLMGSQIQYAGRILGVIGTAAKRIPVMIGISVINAFIAMLLMRVIL >Mature_157_residues SAPISTSASKPMITDVFVAGARKGWNIATTSTLPNVLMAFVLIKALEITGALKGMALVFGPLMGLFGLPGEAAAVLIGGW MSMGGGVGVAVALFDQGILTGTHLAILAPAIYLMGSQIQYAGRILGVIGTAAKRIPVMIGISVINAFIAMLLMRVIL
Specific function: Unknown
COG id: COG0700
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the spmB family [H]
Homologues:
Organism=Escherichia coli, GI1790785, Length=152, Percent_Identity=48.6842105263158, Blast_Score=142, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011642 [H]
Pfam domain/function: PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 16185; Mature: 16054
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPISTSASKPMITDVFVAGARKGWNIATTSTLPNVLMAFVLIKALEITGALKGMALVF CCCCCCCCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GPLMGLFGLPGEAAAVLIGGWMSMGGGVGVAVALFDQGILTGTHLAILAPAIYLMGSQIQ HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHH YAGRILGVIGTAAKRIPVMIGISVINAFIAMLLMRVIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SAPISTSASKPMITDVFVAGARKGWNIATTSTLPNVLMAFVLIKALEITGALKGMALVF CCCCCCCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GPLMGLFGLPGEAAAVLIGGWMSMGGGVGVAVALFDQGILTGTHLAILAPAIYLMGSQIQ HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHH YAGRILGVIGTAAKRIPVMIGISVINAFIAMLLMRVIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]