Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
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Accession | NC_012778 |
Length | 2,144,190 |
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The map label for this gene is 238917588
Identifier: 238917588
GI number: 238917588
Start: 1727755
End: 1729224
Strand: Reverse
Name: 238917588
Synonym: EUBELI_01667
Alternate gene names: NA
Gene position: 1729224-1727755 (Counterclockwise)
Preceding gene: 238917589
Following gene: 238917587
Centisome position: 80.65
GC content: 41.36
Gene sequence:
>1470_bases ATGTACCTGGAAGATGAAAGTCACAGCTATCATATTAGTACAGGTTCCATTGTCATCAATAAGGACGGCGAATTTGTAAC AGATACTACTCTTATGAAGGGTTACTGGTACGACTTTATCTTCAATTTCTTCAAGGACAGCCTTGCAGGAGTAACTTTTG ATGTATATGCAAAAGAGGATATCGTAAGTGCCGACGGACTTGATACTGTATATCATAAGGCAGGAGACAAGGTGGCAACC ATCGTGACAAATGATAAGGGTATCGCAAGAATTGATGACCTTCCACTTGGCAAGTATTATCTTGTTGAGACAAAGACAAT TGATGGATTTGTATTAGATGATACACCGATTGAGGCAGACCTTTCTTATATCGACCAGAACAAAAAGTTTGTATTTGCAG GAATGGATGTGACAAATGAGCGTCAGAAAGTGCAGATTACTGTAACCAAGACTGATTCAGAGACTAAGGAAGCACTTGAA GGAGCAGTATTCGGCTTATTTGCGAAAGAAGATATCGTGAACAAAGATGGCAAGGTAATCGTAAAAGCTGATACACAGAT TGAGAGAACAGTAACAGGCAAGGACGGAAAGGCAGCATTTACCTCTGACCTTCCACTTGGACAGTATTATGTCAAAGAGA TTGAGGCACCAAAGGGCTATGTGAAGTCTGATAAGATTTTTGATGTGGATGCTTCATATCAGGGAGATAAGGTAAAGGTT ATCGAGTTTGAGGCAGCATTTGAAAATGCACCGATTAAGGTAGAGATTTCAAAGACTGATATCACAGGCGAGAAAGAATT ACCTGGAGCAAAGCTTTCAGTTATTGATGCTGATGGAAAGCTTGTTGAGAGCTGGACATCAGAAGCAGGAAAGACTCATA TGATTGAGAGACTTCCTGTCGGAAAGTACACACTCAGAGAGGAATCTGCACCATATGGATATAAGGTGGCAAGTGATGTA ACCTTTGAAGTAAAGGAGACAGCAGAAATCCAGAAGGTATCCATGAAGGACGAGCAGGCAGTCGGAAAGATTGTCATTGA GAAAACTGACAAAGTAACCGGAAAGCCGATCGATGGTGTTGTATTTGAAGTAAGAGATAAGGACGGAAAGGTGCTTGACA CACTCACTACTGACAAGAATGGTCATGCAGAGAGCAAGGAGCTTCCTATCTGTACTTACAACGAGGATGGATCATTCAAG GAAGATATCCATTATACAGTAGTTGAGACAAAAGCAGCTGACGGATATATCCTCGATGAGACAGCTCACGATGTAACTCT TCGATACGATGACAATGCACCGGATGTTGTTGTAACAACTCTTAAGCTTATCAATGTACCGACAGAGCCTAAGCTTCCAC AGACAGGCGACAATGCAAATCCGCTTCTTTATCTTGGAATTGGTGCACTTGCACTTATTACAGGTGTTGGAGTAGGACTT CGTGGAAGAAAGAAAAAGAATAAACAGTAA
Upstream 100 bases:
>100_bases CATTCCAAGAAAAACTTGGGATGAACAATTTAATAATCAGTTACAGATTTGCAAAGTAGTTTGCACTGCAGGGTATCTGT AGGTAGTAAATTTACGGGGC
Downstream 100 bases:
>100_bases CAATTAACCTTGCGGGGAATGTAAGCCAGTGACTTATGTTCCCTGCTTTTTTAGATTAAGGAGGAACCGTAATATGATGA ATTACGAGATTTTTAAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: LPXTG-Motif Cell Wall Anchor Domain Protein; Cell Wall Surface Anchor Family Protein; Cell Wall Anchor Domain-Containing Protein; Lpxtg-Motif Cell Wall Anchor Domain Protein; Cna B Domain Protein; Cell Wall-Associated Surface Protein; Cell Surface Protein; Outer Membrane Protein; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Peptidoglycan Bound Protein; Cna B Domain-Containing Protein; Collagen Adhesin; Surface Protein Gram-Positive Cocci; Collagen Adhesion Protein C-Terminal; Pepdidoglycan Bound Protein; B-Type Cna Protein; Cell Wall Anchoring Protein; Adhesion Exoprotein; Celll Wall Surface Anchor Family Protein; Peptidoglycan Anchored Protein; Cell Wall Anchor Protein; Surface Anchored Protein; Collagen Adhesin-Like Protein; LPXTG Cell Wall Surface Protein
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MYLEDESHSYHISTGSIVINKDGEFVTDTTLMKGYWYDFIFNFFKDSLAGVTFDVYAKEDIVSADGLDTVYHKAGDKVAT IVTNDKGIARIDDLPLGKYYLVETKTIDGFVLDDTPIEADLSYIDQNKKFVFAGMDVTNERQKVQITVTKTDSETKEALE GAVFGLFAKEDIVNKDGKVIVKADTQIERTVTGKDGKAAFTSDLPLGQYYVKEIEAPKGYVKSDKIFDVDASYQGDKVKV IEFEAAFENAPIKVEISKTDITGEKELPGAKLSVIDADGKLVESWTSEAGKTHMIERLPVGKYTLREESAPYGYKVASDV TFEVKETAEIQKVSMKDEQAVGKIVIEKTDKVTGKPIDGVVFEVRDKDGKVLDTLTTDKNGHAESKELPICTYNEDGSFK EDIHYTVVETKAADGYILDETAHDVTLRYDDNAPDVVVTTLKLINVPTEPKLPQTGDNANPLLYLGIGALALITGVGVGL RGRKKKNKQ
Sequences:
>Translated_489_residues MYLEDESHSYHISTGSIVINKDGEFVTDTTLMKGYWYDFIFNFFKDSLAGVTFDVYAKEDIVSADGLDTVYHKAGDKVAT IVTNDKGIARIDDLPLGKYYLVETKTIDGFVLDDTPIEADLSYIDQNKKFVFAGMDVTNERQKVQITVTKTDSETKEALE GAVFGLFAKEDIVNKDGKVIVKADTQIERTVTGKDGKAAFTSDLPLGQYYVKEIEAPKGYVKSDKIFDVDASYQGDKVKV IEFEAAFENAPIKVEISKTDITGEKELPGAKLSVIDADGKLVESWTSEAGKTHMIERLPVGKYTLREESAPYGYKVASDV TFEVKETAEIQKVSMKDEQAVGKIVIEKTDKVTGKPIDGVVFEVRDKDGKVLDTLTTDKNGHAESKELPICTYNEDGSFK EDIHYTVVETKAADGYILDETAHDVTLRYDDNAPDVVVTTLKLINVPTEPKLPQTGDNANPLLYLGIGALALITGVGVGL RGRKKKNKQ >Mature_489_residues MYLEDESHSYHISTGSIVINKDGEFVTDTTLMKGYWYDFIFNFFKDSLAGVTFDVYAKEDIVSADGLDTVYHKAGDKVAT IVTNDKGIARIDDLPLGKYYLVETKTIDGFVLDDTPIEADLSYIDQNKKFVFAGMDVTNERQKVQITVTKTDSETKEALE GAVFGLFAKEDIVNKDGKVIVKADTQIERTVTGKDGKAAFTSDLPLGQYYVKEIEAPKGYVKSDKIFDVDASYQGDKVKV IEFEAAFENAPIKVEISKTDITGEKELPGAKLSVIDADGKLVESWTSEAGKTHMIERLPVGKYTLREESAPYGYKVASDV TFEVKETAEIQKVSMKDEQAVGKIVIEKTDKVTGKPIDGVVFEVRDKDGKVLDTLTTDKNGHAESKELPICTYNEDGSFK EDIHYTVVETKAADGYILDETAHDVTLRYDDNAPDVVVTTLKLINVPTEPKLPQTGDNANPLLYLGIGALALITGVGVGL RGRKKKNKQ
Specific function: Unknown
COG id: COG4932
COG function: function code M; Predicted outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53952; Mature: 53952
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS50847 GRAM_POS_ANCHORING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLEDESHSYHISTGSIVINKDGEFVTDTTLMKGYWYDFIFNFFKDSLAGVTFDVYAKED CCCCCCCCEEEEEECEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC IVSADGLDTVYHKAGDKVATIVTNDKGIARIDDLPLGKYYLVETKTIDGFVLDDTPIEAD CCCCCCCHHHHHCCCCEEEEEEECCCCCEEECCCCCCCEEEEEEEEECCEEECCCCCCCC LSYIDQNKKFVFAGMDVTNERQKVQITVTKTDSETKEALEGAVFGLFAKEDIVNKDGKVI HHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHEEEEEEHHHHCCCCCCEE VKADTQIERTVTGKDGKAAFTSDLPLGQYYVKEIEAPKGYVKSDKIFDVDASYQGDKVKV EEECCCEEEEECCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEE IEFEAAFENAPIKVEISKTDITGEKELPGAKLSVIDADGKLVESWTSEAGKTHMIERLPV EEEEHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEHHHCCC GKYTLREESAPYGYKVASDVTFEVKETAEIQKVSMKDEQAVGKIVIEKTDKVTGKPIDGV CCEEECCCCCCCCEEEECCEEEEEECCCCEEEECCCCHHCCCEEEEEECCCCCCCCCCCE VFEVRDKDGKVLDTLTTDKNGHAESKELPICTYNEDGSFKEDIHYTVVETKAADGYILDE EEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCEEEEC TAHDVTLRYDDNAPDVVVTTLKLINVPTEPKLPQTGDNANPLLYLGIGALALITGVGVGL CCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCC RGRKKKNKQ CCCCCCCCC >Mature Secondary Structure MYLEDESHSYHISTGSIVINKDGEFVTDTTLMKGYWYDFIFNFFKDSLAGVTFDVYAKED CCCCCCCCEEEEEECEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC IVSADGLDTVYHKAGDKVATIVTNDKGIARIDDLPLGKYYLVETKTIDGFVLDDTPIEAD CCCCCCCHHHHHCCCCEEEEEEECCCCCEEECCCCCCCEEEEEEEEECCEEECCCCCCCC LSYIDQNKKFVFAGMDVTNERQKVQITVTKTDSETKEALEGAVFGLFAKEDIVNKDGKVI HHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHEEEEEEHHHHCCCCCCEE VKADTQIERTVTGKDGKAAFTSDLPLGQYYVKEIEAPKGYVKSDKIFDVDASYQGDKVKV EEECCCEEEEECCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEE IEFEAAFENAPIKVEISKTDITGEKELPGAKLSVIDADGKLVESWTSEAGKTHMIERLPV EEEEHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEHHHCCC GKYTLREESAPYGYKVASDVTFEVKETAEIQKVSMKDEQAVGKIVIEKTDKVTGKPIDGV CCEEECCCCCCCCEEEECCEEEEEECCCCEEEECCCCHHCCCEEEEEECCCCCCCCCCCE VFEVRDKDGKVLDTLTTDKNGHAESKELPICTYNEDGSFKEDIHYTVVETKAADGYILDE EEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCEEEEC TAHDVTLRYDDNAPDVVVTTLKLINVPTEPKLPQTGDNANPLLYLGIGALALITGVGVGL CCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCC RGRKKKNKQ CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA