Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
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Accession | NC_012778 |
Length | 2,144,190 |
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The map label for this gene is 238917565
Identifier: 238917565
GI number: 238917565
Start: 1704358
End: 1705896
Strand: Reverse
Name: 238917565
Synonym: EUBELI_01644
Alternate gene names: NA
Gene position: 1705896-1704358 (Counterclockwise)
Preceding gene: 238917566
Following gene: 238917564
Centisome position: 79.56
GC content: 43.79
Gene sequence:
>1539_bases ATGTCTAAGAATATAGGAAGCGAGCCACTCGGCAGATTCTATACAGGCAAAAAGCCGAAGAGAAGAAGAGAATGGCGCGG ATTGAAGGATACATGGTACGACTATGTAAGGTGGCTTGGATACTGGAAGACTTTAATTACATTTATAATAAAACCTAATA ACATGAAGGGATTCTTCAGATACCGCTGGATGATTAATTATCTTGCATTGCCTGATTTCATGGACAGGCATACCGAGGGC ATGAGAGGAACTCAGCTTAGAATGGCGCATCAGGCACTGGGACTTATCGTTACTGATATATGCGGGATGCTTGGACAGAT ATTTAAGGCAGACCCGGCTATCGGCAATGATAAGAAGCTAAACAGCAAGATTGTCCTTTTTGATGAAAATATGATGAGTA CCCTGATGGGAGGTTTTCCTAACCTTACATGGTTGTCAGTGGAAGTTCCTGCAGTGTATACAAGCTCGATGATGTCACAG GACGGAGTAAGCTATTATGTTGACGTTACACACCAGTATGGTGTGCCATCAGATGTCTGTCCTATGCCGGCAGCTGAGCT TGGTGTTGCATTGGCTGATGATTTCCCGCTTATAGGCTGCTGTGCCGTGCAGTGTAATACGACATGTGACGGAAGCCTTA TGGGTAACGGGATTGAAGCAAGGTCATTTAAGATTCCTACATTTCAGCTTGCTGTGCCAATAAGACACAGGCAGGAAAGC GTACAGGAGTATGCGGCAGAAGAGGTTGTCAATGCAATCCATTTCATAGAGGAACAGACTGGAGAGAAGTTCGACTGGGA TGCATTCTTTAAGAGTATGAAGCGGTTTAATGCAGAGACAGAGGAATTCTTAGAGTGGATGGAGATTTCCAAGACAGATT ATCCGCAGGTTATGGGCGTAACGCTTGCACTCTACAGATATGGTGTATATCAGGCTGCCGGTGGAAGAAATCAGGCATTC CTTGATATGGATAAGAAGCTTACTAAGATGGCACTTGATGCATATAAGAGTAAAGAGATGGCGGCGAAGGAGTACCGCCA CAGAGCCATGACATGGGGCGTTCAGGCTGCATATTATACGGCACTCCCAATCTGGCTTCTTAACTGCTGGGGTGTTGTAA CTATTGCAGATATGTTAAGTATGGTGTCTACAGAGATGGTCAACACAGAGGATAAGCACCAGGCAATGTTAGACCTTGCA TATCTGTATGAGAACATGATTATGAGAAACCGCTCTAACGGCGGTTATGAGACAGGTGTAGAGGCACTCTGGCGTTTCTG CGAAATGTTTAATATTGATATAGTAATCATGTATGTTCATATGGGCTGCAAATCAATGTCAGGATATCATGGTCTATTTG AGGAAGAAGCGAGAAAACATGGAATTCATTTAATATGGGTAACGCACAATCTTATGTGTCCTGAGGATGGAACAAGAAGA GACATGAGAACGGAGATTAACAGATATATGAGAACTGTTTTCAGGGAAGAACCGCTTGACCCATCACTTGAGGATTTTGA CGATTCTAAGAGCTGGTAA
Upstream 100 bases:
>100_bases CTTATGCTGTCGGAACTTCTGGACAGTTAAGAACAAGAATACAGGCATTTGTTGAGAGCCTTGAGATTAAGCGTATCAAT GCAGGAAGGAAATTATAAAT
Downstream 100 bases:
>100_bases GAAGTGTGTATGCTGCATACGTGGCAGGAAAGGATAGCAGAATGAAATATTTCGGTGGTTGTGACGCAGGAAGTACATAT ACCAAATGCGTAATTATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MSKNIGSEPLGRFYTGKKPKRRREWRGLKDTWYDYVRWLGYWKTLITFIIKPNNMKGFFRYRWMINYLALPDFMDRHTEG MRGTQLRMAHQALGLIVTDICGMLGQIFKADPAIGNDKKLNSKIVLFDENMMSTLMGGFPNLTWLSVEVPAVYTSSMMSQ DGVSYYVDVTHQYGVPSDVCPMPAAELGVALADDFPLIGCCAVQCNTTCDGSLMGNGIEARSFKIPTFQLAVPIRHRQES VQEYAAEEVVNAIHFIEEQTGEKFDWDAFFKSMKRFNAETEEFLEWMEISKTDYPQVMGVTLALYRYGVYQAAGGRNQAF LDMDKKLTKMALDAYKSKEMAAKEYRHRAMTWGVQAAYYTALPIWLLNCWGVVTIADMLSMVSTEMVNTEDKHQAMLDLA YLYENMIMRNRSNGGYETGVEALWRFCEMFNIDIVIMYVHMGCKSMSGYHGLFEEEARKHGIHLIWVTHNLMCPEDGTRR DMRTEINRYMRTVFREEPLDPSLEDFDDSKSW
Sequences:
>Translated_512_residues MSKNIGSEPLGRFYTGKKPKRRREWRGLKDTWYDYVRWLGYWKTLITFIIKPNNMKGFFRYRWMINYLALPDFMDRHTEG MRGTQLRMAHQALGLIVTDICGMLGQIFKADPAIGNDKKLNSKIVLFDENMMSTLMGGFPNLTWLSVEVPAVYTSSMMSQ DGVSYYVDVTHQYGVPSDVCPMPAAELGVALADDFPLIGCCAVQCNTTCDGSLMGNGIEARSFKIPTFQLAVPIRHRQES VQEYAAEEVVNAIHFIEEQTGEKFDWDAFFKSMKRFNAETEEFLEWMEISKTDYPQVMGVTLALYRYGVYQAAGGRNQAF LDMDKKLTKMALDAYKSKEMAAKEYRHRAMTWGVQAAYYTALPIWLLNCWGVVTIADMLSMVSTEMVNTEDKHQAMLDLA YLYENMIMRNRSNGGYETGVEALWRFCEMFNIDIVIMYVHMGCKSMSGYHGLFEEEARKHGIHLIWVTHNLMCPEDGTRR DMRTEINRYMRTVFREEPLDPSLEDFDDSKSW >Mature_511_residues SKNIGSEPLGRFYTGKKPKRRREWRGLKDTWYDYVRWLGYWKTLITFIIKPNNMKGFFRYRWMINYLALPDFMDRHTEGM RGTQLRMAHQALGLIVTDICGMLGQIFKADPAIGNDKKLNSKIVLFDENMMSTLMGGFPNLTWLSVEVPAVYTSSMMSQD GVSYYVDVTHQYGVPSDVCPMPAAELGVALADDFPLIGCCAVQCNTTCDGSLMGNGIEARSFKIPTFQLAVPIRHRQESV QEYAAEEVVNAIHFIEEQTGEKFDWDAFFKSMKRFNAETEEFLEWMEISKTDYPQVMGVTLALYRYGVYQAAGGRNQAFL DMDKKLTKMALDAYKSKEMAAKEYRHRAMTWGVQAAYYTALPIWLLNCWGVVTIADMLSMVSTEMVNTEDKHQAMLDLAY LYENMIMRNRSNGGYETGVEALWRFCEMFNIDIVIMYVHMGCKSMSGYHGLFEEEARKHGIHLIWVTHNLMCPEDGTRRD MRTEINRYMRTVFREEPLDPSLEDFDDSKSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59149; Mature: 59018
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNIGSEPLGRFYTGKKPKRRREWRGLKDTWYDYVRWLGYWKTLITFIIKPNNMKGFFR CCCCCCCCCCHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHH YRWMINYLALPDFMDRHTEGMRGTQLRMAHQALGLIVTDICGMLGQIFKADPAIGNDKKL HHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NSKIVLFDENMMSTLMGGFPNLTWLSVEVPAVYTSSMMSQDGVSYYVDVTHQYGVPSDVC CCEEEEECCHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEEEEECCCCCCCCC PMPAAELGVALADDFPLIGCCAVQCNTTCDGSLMGNGIEARSFKIPTFQLAVPIRHRQES CCCHHHHCEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEECCEEEEECCHHHHHHH VQEYAAEEVVNAIHFIEEQTGEKFDWDAFFKSMKRFNAETEEFLEWMEISKTDYPQVMGV HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHH TLALYRYGVYQAAGGRNQAFLDMDKKLTKMALDAYKSKEMAAKEYRHRAMTWGVQAAYYT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALPIWLLNCWGVVTIADMLSMVSTEMVNTEDKHQAMLDLAYLYENMIMRNRSNGGYETGV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH EALWRFCEMFNIDIVIMYVHMGCKSMSGYHGLFEEEARKHGIHLIWVTHNLMCPEDGTRR HHHHHHHHHHCCCEEEEEEHHCHHHCCCCCCHHHHHHHHCCEEEEEEECCEECCCCCCCH DMRTEINRYMRTVFREEPLDPSLEDFDDSKSW HHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC >Mature Secondary Structure SKNIGSEPLGRFYTGKKPKRRREWRGLKDTWYDYVRWLGYWKTLITFIIKPNNMKGFFR CCCCCCCCCHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHH YRWMINYLALPDFMDRHTEGMRGTQLRMAHQALGLIVTDICGMLGQIFKADPAIGNDKKL HHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NSKIVLFDENMMSTLMGGFPNLTWLSVEVPAVYTSSMMSQDGVSYYVDVTHQYGVPSDVC CCEEEEECCHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEEEEECCCCCCCCC PMPAAELGVALADDFPLIGCCAVQCNTTCDGSLMGNGIEARSFKIPTFQLAVPIRHRQES CCCHHHHCEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEECCEEEEECCHHHHHHH VQEYAAEEVVNAIHFIEEQTGEKFDWDAFFKSMKRFNAETEEFLEWMEISKTDYPQVMGV HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHH TLALYRYGVYQAAGGRNQAFLDMDKKLTKMALDAYKSKEMAAKEYRHRAMTWGVQAAYYT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALPIWLLNCWGVVTIADMLSMVSTEMVNTEDKHQAMLDLAYLYENMIMRNRSNGGYETGV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH EALWRFCEMFNIDIVIMYVHMGCKSMSGYHGLFEEEARKHGIHLIWVTHNLMCPEDGTRR HHHHHHHHHHCCCEEEEEEHHCHHHCCCCCCHHHHHHHHCCEEEEEEECCEECCCCCCCH DMRTEINRYMRTVFREEPLDPSLEDFDDSKSW HHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA