Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
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Accession | NC_012778 |
Length | 2,144,190 |
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The map label for this gene is 238917556
Identifier: 238917556
GI number: 238917556
Start: 1695248
End: 1696228
Strand: Reverse
Name: 238917556
Synonym: EUBELI_01635
Alternate gene names: NA
Gene position: 1696228-1695248 (Counterclockwise)
Preceding gene: 238917558
Following gene: 238917555
Centisome position: 79.11
GC content: 39.14
Gene sequence:
>981_bases ATGCCATTAAAGAACAGTAAGGAAGTAAAACAAAGAATTGTTGTACAGCTTGACCAGGATTACTGGCTTGCAAGTGTAGG AAGAATGTTGAAAGAACACTTCCCGGATGTCGAATTTGATTTTGTAATAAGCAGGGGAGGGGCACAGTATCTTAATGATG CAGCAGTAAATGATGACCTTGCAGATATAATAATAGATGCATCGTCATGGACACAGACTTCAACACTTGATGATGACTAT GATATTAATCCAGAAGAATATCTATATGATTTTTCATGGACAGATATTACAAATATGTTTTACAAAGTATATCTTGATGG GTTTACCAATGAAGATGGTTCAGTAAACTGGCTTCCTGGTTCGGCAAGTGTTGAGGGAATACTGGCTAATACTGAACTTT TTGATGAGTATGGAATACAGCTTCCTTACAATTATGATACATTTGTTGAAGCGTGCAACAAGTTTGGAGAATATGGTATA AGGGGATTTGCAACAGATTACAAATATGATTGCACAGATTCATATATGCTTCAGGCATGGTCGATACCATTGCTTCAGAG TTCAAAAGGAAGAATTTGGCGCAACGATGCATCAGAAGGAAATGTTGATTATCTGCCTGATGAATTGGGAACGCAGTTGT TTTCAAGACTTGAACAGGTATTTAAAGATACGGGTGTGCAGGTAGAAGATGTCAGTAGAGGATATTCAGTTACATTCGAA GATTTTGTGTCAGGCAGGGTGGCAATGATACGCCAGAGCACCAATATTGCTGAATATCAGGCTGAAGGAATGACCAGTCT TATGCTGCTGCCATATTTTGGGGAGACAGAAAATGATGACTGGTATTTCAGTACACCAGGATATTCAGTAGCCATGAACG GAAAACTAAAGGGGGCAGGAAAGCGTGAAGAACTGGCACTTGATATAGTAAGATATTTTTTTAGCAGTGAAGTGATGAAT GCGATGCCAGACAGGCGGTAA
Upstream 100 bases:
>100_bases AGCAACATAGGATTAGAACATTTTGGAGGATATAATGAAAAGGGTAATGTGTGTTTTGCTGATGATAGTATTCTGCGGAG CTTTTTTGATGTCATGCAGT
Downstream 100 bases:
>100_bases AAATATTTAATGATAATTATAATTATGTTAAAGAAAAAGGAAATATTGTAACCACATTTGACAGAGAATATACATGGAAA TCTACGGATACAGGAAGTGA
Product: sugar ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MPLKNSKEVKQRIVVQLDQDYWLASVGRMLKEHFPDVEFDFVISRGGAQYLNDAAVNDDLADIIIDASSWTQTSTLDDDY DINPEEYLYDFSWTDITNMFYKVYLDGFTNEDGSVNWLPGSASVEGILANTELFDEYGIQLPYNYDTFVEACNKFGEYGI RGFATDYKYDCTDSYMLQAWSIPLLQSSKGRIWRNDASEGNVDYLPDELGTQLFSRLEQVFKDTGVQVEDVSRGYSVTFE DFVSGRVAMIRQSTNIAEYQAEGMTSLMLLPYFGETENDDWYFSTPGYSVAMNGKLKGAGKREELALDIVRYFFSSEVMN AMPDRR
Sequences:
>Translated_326_residues MPLKNSKEVKQRIVVQLDQDYWLASVGRMLKEHFPDVEFDFVISRGGAQYLNDAAVNDDLADIIIDASSWTQTSTLDDDY DINPEEYLYDFSWTDITNMFYKVYLDGFTNEDGSVNWLPGSASVEGILANTELFDEYGIQLPYNYDTFVEACNKFGEYGI RGFATDYKYDCTDSYMLQAWSIPLLQSSKGRIWRNDASEGNVDYLPDELGTQLFSRLEQVFKDTGVQVEDVSRGYSVTFE DFVSGRVAMIRQSTNIAEYQAEGMTSLMLLPYFGETENDDWYFSTPGYSVAMNGKLKGAGKREELALDIVRYFFSSEVMN AMPDRR >Mature_325_residues PLKNSKEVKQRIVVQLDQDYWLASVGRMLKEHFPDVEFDFVISRGGAQYLNDAAVNDDLADIIIDASSWTQTSTLDDDYD INPEEYLYDFSWTDITNMFYKVYLDGFTNEDGSVNWLPGSASVEGILANTELFDEYGIQLPYNYDTFVEACNKFGEYGIR GFATDYKYDCTDSYMLQAWSIPLLQSSKGRIWRNDASEGNVDYLPDELGTQLFSRLEQVFKDTGVQVEDVSRGYSVTFED FVSGRVAMIRQSTNIAEYQAEGMTSLMLLPYFGETENDDWYFSTPGYSVAMNGKLKGAGKREELALDIVRYFFSSEVMNA MPDRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37272; Mature: 37140
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLKNSKEVKQRIVVQLDQDYWLASVGRMLKEHFPDVEFDFVISRGGAQYLNDAAVNDDL CCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCC ADIIIDASSWTQTSTLDDDYDINPEEYLYDFSWTDITNMFYKVYLDGFTNEDGSVNWLPG HHEEEECCCCCCCCCCCCCCCCCHHHEEEECCHHHHHHHHHHEEECCCCCCCCCEEEECC SASVEGILANTELFDEYGIQLPYNYDTFVEACNKFGEYGIRGFATDYKYDCTDSYMLQAW CCCCCEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH SIPLLQSSKGRIWRNDASEGNVDYLPDELGTQLFSRLEQVFKDTGVQVEDVSRGYSVTFE CCCCEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEHH DFVSGRVAMIRQSTNIAEYQAEGMTSLMLLPYFGETENDDWYFSTPGYSVAMNGKLKGAG HHHCCCEEEEECCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCEEEEECCEECCCC KREELALDIVRYFFSSEVMNAMPDRR CHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PLKNSKEVKQRIVVQLDQDYWLASVGRMLKEHFPDVEFDFVISRGGAQYLNDAAVNDDL CCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCC ADIIIDASSWTQTSTLDDDYDINPEEYLYDFSWTDITNMFYKVYLDGFTNEDGSVNWLPG HHEEEECCCCCCCCCCCCCCCCCHHHEEEECCHHHHHHHHHHEEECCCCCCCCCEEEECC SASVEGILANTELFDEYGIQLPYNYDTFVEACNKFGEYGIRGFATDYKYDCTDSYMLQAW CCCCCEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH SIPLLQSSKGRIWRNDASEGNVDYLPDELGTQLFSRLEQVFKDTGVQVEDVSRGYSVTFE CCCCEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEHH DFVSGRVAMIRQSTNIAEYQAEGMTSLMLLPYFGETENDDWYFSTPGYSVAMNGKLKGAG HHHCCCEEEEECCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCEEEEECCEECCCC KREELALDIVRYFFSSEVMNAMPDRR CHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA