Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
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Accession | NC_012778 |
Length | 2,144,190 |
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The map label for this gene is 238917507
Identifier: 238917507
GI number: 238917507
Start: 1638041
End: 1638916
Strand: Reverse
Name: 238917507
Synonym: EUBELI_01586
Alternate gene names: NA
Gene position: 1638916-1638041 (Counterclockwise)
Preceding gene: 238917509
Following gene: 238917506
Centisome position: 76.44
GC content: 41.44
Gene sequence:
>876_bases ATGGGTAAAGTTGCCATACTTACAGACAGTAACAGTGGAATTACACAGGCTCAGTCTAAGGAGCTTGGAGTTAAAGTTAT ACCAATGCCGTTCTTTATAGATGGAGAACAGTATTTTGAAGATATTAATCTTACACAGGAAGAGTTTTACGAGAAGTTAA AGCAGGATGCTGATATATCTACTTCACAGCCTTCTATTGGTGAGATGCAGGACGCATTTGATGAGCTTCTTAAGGAATAT GATGAGCTTGTATATATTCCTATGTCAAGCGGGCTCAGCGGAACATGTCAGACAGCGGCTATGGTTGCTGATGATTATGA TGGAAAGGTTCAGGTTGTCAATAACCAGAGAATTTCTGTAACCATGAGACAGTCTGTTCTTGATGCGAAGGAGCTTGCTA AGAGAGGTAAGTCTGCGGCAGAGATTAAGGAGATTCTTGAGAAGCATAAGATGGAATCAAGCATATATATTACACTTGAT ACTCTTAAGTACTTAAAGAAGGGCGGAAGAATAACTCCTGCGGCAGCTGCTATTGGAACTATGTTAAAGCTTAATCCTGT GCTTCAGATTCAGGGTGAGAAGTTAGATGCATTTGCCAAGGCAAGAGGTAAGGCTTCTGCGAAGAAGATTATGCTTAAGG CAATGCAGGATGATTTAGATACAAGATTTGCAGAATTTGCAAAGGATGGAAAGATGCATATGGAGGTTGCTTATTCAGGT AATCCTGAGGAGGTAGAGGAATGGGCTGCGTTAGTTAAAGAGACTTTCCCACAGTTTGATTTCCACATGGATCCGCTTTC ACTTTCAGTTGCCTGCCACATAGGACATGGTGCACTTGCGATAGCGACATCTGCTTATCTGCCAGAACTTGATTAA
Upstream 100 bases:
>100_bases TTGTTTACAAAAGTGTCAAAATGCCTTACTATATAAGGGTATATACGGAAGTATAACAAAAAATATGATTTACCAGCAAT AGGTTATTGGGAGGATTTAC
Downstream 100 bases:
>100_bases TACGAATGATAAGCCTGTGACAGCGCATGAGTTGTTGCAGGCTTTTGTTTATAAATGCGGATATTACCGCAGGTTAATAT GAATGGAGGATTGTTATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MGKVAILTDSNSGITQAQSKELGVKVIPMPFFIDGEQYFEDINLTQEEFYEKLKQDADISTSQPSIGEMQDAFDELLKEY DELVYIPMSSGLSGTCQTAAMVADDYDGKVQVVNNQRISVTMRQSVLDAKELAKRGKSAAEIKEILEKHKMESSIYITLD TLKYLKKGGRITPAAAAIGTMLKLNPVLQIQGEKLDAFAKARGKASAKKIMLKAMQDDLDTRFAEFAKDGKMHMEVAYSG NPEEVEEWAALVKETFPQFDFHMDPLSLSVACHIGHGALAIATSAYLPELD
Sequences:
>Translated_291_residues MGKVAILTDSNSGITQAQSKELGVKVIPMPFFIDGEQYFEDINLTQEEFYEKLKQDADISTSQPSIGEMQDAFDELLKEY DELVYIPMSSGLSGTCQTAAMVADDYDGKVQVVNNQRISVTMRQSVLDAKELAKRGKSAAEIKEILEKHKMESSIYITLD TLKYLKKGGRITPAAAAIGTMLKLNPVLQIQGEKLDAFAKARGKASAKKIMLKAMQDDLDTRFAEFAKDGKMHMEVAYSG NPEEVEEWAALVKETFPQFDFHMDPLSLSVACHIGHGALAIATSAYLPELD >Mature_290_residues GKVAILTDSNSGITQAQSKELGVKVIPMPFFIDGEQYFEDINLTQEEFYEKLKQDADISTSQPSIGEMQDAFDELLKEYD ELVYIPMSSGLSGTCQTAAMVADDYDGKVQVVNNQRISVTMRQSVLDAKELAKRGKSAAEIKEILEKHKMESSIYITLDT LKYLKKGGRITPAAAAIGTMLKLNPVLQIQGEKLDAFAKARGKASAKKIMLKAMQDDLDTRFAEFAKDGKMHMEVAYSGN PEEVEEWAALVKETFPQFDFHMDPLSLSVACHIGHGALAIATSAYLPELD
Specific function: Unknown
COG id: COG1307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DegV domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003797 [H]
Pfam domain/function: PF02645 DegV [H]
EC number: NA
Molecular weight: Translated: 32132; Mature: 32001
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVAILTDSNSGITQAQSKELGVKVIPMPFFIDGEQYFEDINLTQEEFYEKLKQDADIS CCEEEEEECCCCCCCCCHHHHCCEEEECCEEEECCHHHHHHCCCCHHHHHHHHHHCCCCC TSQPSIGEMQDAFDELLKEYDELVYIPMSSGLSGTCQTAAMVADDYDGKVQVVNNQRISV CCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHEECCCCCEEEEECCCEEEE TMRQSVLDAKELAKRGKSAAEIKEILEKHKMESSIYITLDTLKYLKKGGRITPAAAAIGT EHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHH MLKLNPVLQIQGEKLDAFAKARGKASAKKIMLKAMQDDLDTRFAEFAKDGKMHMEVAYSG HHHCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC NPEEVEEWAALVKETFPQFDFHMDPLSLSVACHIGHGALAIATSAYLPELD CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCC >Mature Secondary Structure GKVAILTDSNSGITQAQSKELGVKVIPMPFFIDGEQYFEDINLTQEEFYEKLKQDADIS CEEEEEECCCCCCCCCHHHHCCEEEECCEEEECCHHHHHHCCCCHHHHHHHHHHCCCCC TSQPSIGEMQDAFDELLKEYDELVYIPMSSGLSGTCQTAAMVADDYDGKVQVVNNQRISV CCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHEECCCCCEEEEECCCEEEE TMRQSVLDAKELAKRGKSAAEIKEILEKHKMESSIYITLDTLKYLKKGGRITPAAAAIGT EHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHH MLKLNPVLQIQGEKLDAFAKARGKASAKKIMLKAMQDDLDTRFAEFAKDGKMHMEVAYSG HHHCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC NPEEVEEWAALVKETFPQFDFHMDPLSLSVACHIGHGALAIATSAYLPELD CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11418146 [H]