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The map label for this gene is yerC [H]

Identifier: 238917484

GI number: 238917484

Start: 1613338

End: 1613652

Strand: Reverse

Name: yerC [H]

Synonym: EUBELI_01562

Alternate gene names: 238917484

Gene position: 1613652-1613338 (Counterclockwise)

Preceding gene: 238917485

Following gene: 238917482

Centisome position: 75.26

GC content: 37.78

Gene sequence:

>315_bases
ATGAACAATAAGTTAAAGACACAGGCTGTTGAGCAGCTTTTTCAGGCAATATTAAGTCTTAAGGATTTAGATGAAGCATA
CGATTTCTTTGAGGATGTATGTACAATTAACGAGATTTTATCCTTATCCCAGAGATTTGAGGTTGCCAAGATGTTAAGAG
AACACAGGACATATCTTGATATTGCAGAGAAGACAGGTGCGTCTACTGCGACAATCAGCAGGGTAAACCGTTCGCTTAAT
TATGGTAATGACGGGTATGACAGAGTATTTGAAAGACTTGGCATGCTTGAGAAAGAGTCAGAAGATAATAAGTAA

Upstream 100 bases:

>100_bases
GCATTAAGAAGTGAATAATGTCTTTACTTTAAAACTTCACTGTGTTAAAATTTAAAAGTAATAAGCCAATGTTATTTTTG
GAAAACCGGGGTGGATAATT

Downstream 100 bases:

>100_bases
TATATGAAGCAATGTAAAAGGGAACTGTCAGTACTGGCAGTTCCCTTAATTTGTATGGATTATTTCTTTTTGTCTGTTTT
ATCAGGCTTCTCAGGATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNNKLKTQAVEQLFQAILSLKDLDEAYDFFEDVCTINEILSLSQRFEVAKMLREHRTYLDIAEKTGASTATISRVNRSLN
YGNDGYDRVFERLGMLEKESEDNK

Sequences:

>Translated_104_residues
MNNKLKTQAVEQLFQAILSLKDLDEAYDFFEDVCTINEILSLSQRFEVAKMLREHRTYLDIAEKTGASTATISRVNRSLN
YGNDGYDRVFERLGMLEKESEDNK
>Mature_104_residues
MNNKLKTQAVEQLFQAILSLKDLDEAYDFFEDVCTINEILSLSQRFEVAKMLREHRTYLDIAEKTGASTATISRVNRSLN
YGNDGYDRVFERLGMLEKESEDNK

Specific function: Unknown

COG id: COG4496

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000831
- InterPro:   IPR010921
- InterPro:   IPR013368 [H]

Pfam domain/function: PF01371 Trp_repressor [H]

EC number: NA

Molecular weight: Translated: 12045; Mature: 12045

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKLKTQAVEQLFQAILSLKDLDEAYDFFEDVCTINEILSLSQRFEVAKMLREHRTYLD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEKTGASTATISRVNRSLNYGNDGYDRVFERLGMLEKESEDNK
HHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHCCCCCC
>Mature Secondary Structure
MNNKLKTQAVEQLFQAILSLKDLDEAYDFFEDVCTINEILSLSQRFEVAKMLREHRTYLD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEKTGASTATISRVNRSLNYGNDGYDRVFERLGMLEKESEDNK
HHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969499; 9701819; 9384377 [H]