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The map label for this gene is ydjI [H]

Identifier: 238917481

GI number: 238917481

Start: 1610624

End: 1611580

Strand: Reverse

Name: ydjI [H]

Synonym: EUBELI_01559

Alternate gene names: 238917481

Gene position: 1611580-1610624 (Counterclockwise)

Preceding gene: 238917482

Following gene: 238917480

Centisome position: 75.16

GC content: 40.02

Gene sequence:

>957_bases
ATGGGATTATTCAAAGGGCAGTTTGCCAACGTAGTTGAATGGGAAGAGTACAGAGATGATATAATCTTCTGGAAATGGAC
CAACAGAGAAATCAAGAAAGGCAGTAAGCTGATTATCCGCGCCGGCCAGGATGCAATCTTTATGTACAATGGTAAGATTG
AAGGTATTTTTAAGGACGAGGGAAGCTTTGATATTGAATCACAGATTATTCCATTCTTATCAACACTTAAAGGCTTTAAG
TTTGGCTTCAACAGTGGAGTAAGAGCTGAAGTTTTATTCGTTAATACTAAGGAATTCACAGAGAAGTGGGGAACTAAGAA
TCCTATTCTTATTCCAACACAGGCACTTCCAGGTGGCATGCCAATAAGAGCTTTCGGTAACTTCTCGTTTTCAGTATCTG
ATTACATTACGCTTATAGACAAGGTAGCAGGTGTAAAGCAGATGTACACTGTTGCAGATGTTAAGGAAAGAATATCAGCA
GTTCTTGACCAGCTTCTTATGAAGTGGATTTCTAAAGAAGGCAAGGATATGTTTAATCTTCAGGCTAATGCTTATGATAT
CTCAGCGGGTATTAAGACAGACCTTGATATGGAGATGAGCAAGTTAGGAATCACAATAACAAGCTTTACTATCTCAAGCT
TCTCTTATCCGGAAGAAGTACAGAAGATGACTAATAAGGCAGCTTCTCAGGCAATGGTTGGAGATATGAACAGATATACA
CAGATGGCTATGGCTGATAGTATCGGCAATTCAAGAGGCGGTTCGAATATTGCCAGTGATATGATGCAGCTCCAGATGGG
AATGCAGGTTGGACAGCAGATGATGAATAACATGAATACTGCAATGAATAATAATGCAAATGTGTCAGGTGGCACAGCAC
CTAAGTTCTGTCCTAACTGTGGAACACCAACTAATGGCGCTAAGTTCTGTTCTAACTGTGGAACAAAGCTTGCATAA

Upstream 100 bases:

>100_bases
CAGTTGATGATGAATTAGCAGCACTTAAGGCTCAGATGGGCTTATAATTCAGAAGCACATTTATAATGAGATAAGCAATA
CATAGATAAGGAGAGGGAAC

Downstream 100 bases:

>100_bases
TCTGACAATTAGTAATATGTGAATTTAATAAATAACAATCAGGGATGTTGTCATATTGGCTTGGCAACATCCCGTTGTTT
TTGTATAATGTGGTAGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MGLFKGQFANVVEWEEYRDDIIFWKWTNREIKKGSKLIIRAGQDAIFMYNGKIEGIFKDEGSFDIESQIIPFLSTLKGFK
FGFNSGVRAEVLFVNTKEFTEKWGTKNPILIPTQALPGGMPIRAFGNFSFSVSDYITLIDKVAGVKQMYTVADVKERISA
VLDQLLMKWISKEGKDMFNLQANAYDISAGIKTDLDMEMSKLGITITSFTISSFSYPEEVQKMTNKAASQAMVGDMNRYT
QMAMADSIGNSRGGSNIASDMMQLQMGMQVGQQMMNNMNTAMNNNANVSGGTAPKFCPNCGTPTNGAKFCSNCGTKLA

Sequences:

>Translated_318_residues
MGLFKGQFANVVEWEEYRDDIIFWKWTNREIKKGSKLIIRAGQDAIFMYNGKIEGIFKDEGSFDIESQIIPFLSTLKGFK
FGFNSGVRAEVLFVNTKEFTEKWGTKNPILIPTQALPGGMPIRAFGNFSFSVSDYITLIDKVAGVKQMYTVADVKERISA
VLDQLLMKWISKEGKDMFNLQANAYDISAGIKTDLDMEMSKLGITITSFTISSFSYPEEVQKMTNKAASQAMVGDMNRYT
QMAMADSIGNSRGGSNIASDMMQLQMGMQVGQQMMNNMNTAMNNNANVSGGTAPKFCPNCGTPTNGAKFCSNCGTKLA
>Mature_317_residues
GLFKGQFANVVEWEEYRDDIIFWKWTNREIKKGSKLIIRAGQDAIFMYNGKIEGIFKDEGSFDIESQIIPFLSTLKGFKF
GFNSGVRAEVLFVNTKEFTEKWGTKNPILIPTQALPGGMPIRAFGNFSFSVSDYITLIDKVAGVKQMYTVADVKERISAV
LDQLLMKWISKEGKDMFNLQANAYDISAGIKTDLDMEMSKLGITITSFTISSFSYPEEVQKMTNKAASQAMVGDMNRYTQ
MAMADSIGNSRGGSNIASDMMQLQMGMQVGQQMMNNMNTAMNNNANVSGGTAPKFCPNCGTPTNGAKFCSNCGTKLA

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 35195; Mature: 35064

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFKGQFANVVEWEEYRDDIIFWKWTNREIKKGSKLIIRAGQDAIFMYNGKIEGIFKDE
CCCCCCCCCCCCCHHHHCCCEEEEEECCCHHHCCCEEEEEECCCEEEEECCEEEEEEECC
GSFDIESQIIPFLSTLKGFKFGFNSGVRAEVLFVNTKEFTEKWGTKNPILIPTQALPGGM
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHCCCCCCEEEECCCCCCCC
PIRAFGNFSFSVSDYITLIDKVAGVKQMYTVADVKERISAVLDQLLMKWISKEGKDMFNL
EEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
QANAYDISAGIKTDLDMEMSKLGITITSFTISSFSYPEEVQKMTNKAASQAMVGDMNRYT
ECCCEEECCCCCCCCCHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QMAMADSIGNSRGGSNIASDMMQLQMGMQVGQQMMNNMNTAMNNNANVSGGTAPKFCPNC
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GTPTNGAKFCSNCGTKLA
CCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
GLFKGQFANVVEWEEYRDDIIFWKWTNREIKKGSKLIIRAGQDAIFMYNGKIEGIFKDE
CCCCCCCCCCCCHHHHCCCEEEEEECCCHHHCCCEEEEEECCCEEEEECCEEEEEEECC
GSFDIESQIIPFLSTLKGFKFGFNSGVRAEVLFVNTKEFTEKWGTKNPILIPTQALPGGM
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHCCCCCCEEEECCCCCCCC
PIRAFGNFSFSVSDYITLIDKVAGVKQMYTVADVKERISAVLDQLLMKWISKEGKDMFNL
EEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
QANAYDISAGIKTDLDMEMSKLGITITSFTISSFSYPEEVQKMTNKAASQAMVGDMNRYT
ECCCEEECCCCCCCCCHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QMAMADSIGNSRGGSNIASDMMQLQMGMQVGQQMMNNMNTAMNNNANVSGGTAPKFCPNC
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GTPTNGAKFCSNCGTKLA
CCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]