Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
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Accession | NC_012778 |
Length | 2,144,190 |
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The map label for this gene is 238917429
Identifier: 238917429
GI number: 238917429
Start: 1563084
End: 1563734
Strand: Direct
Name: 238917429
Synonym: EUBELI_01507
Alternate gene names: NA
Gene position: 1563084-1563734 (Clockwise)
Preceding gene: 238917423
Following gene: 238917456
Centisome position: 72.9
GC content: 41.78
Gene sequence:
>651_bases ATGGCAATCATTAAATCACCTGTATTTAAAGACATTAGCGAAGCTGAAATATCAGAAATGACCTCAGCCGGCTTCCTGCG TGCCAGAAAATTCCGCAAAAAAGCAATTATATATCATGTCACAGACATTGTTCACGAAATCGGAATCGTTGCGTCAGGAC AGGTCACTATTGAATATATCGACATGTGGGGCAATAAAGCCATTATGAGTAACATTGCTCCCGGACAGGTATTTGCTGAA ACATATGCATTAAGCGGCGAACCTCTGATGGTTGACGCTGTCGCGTCTGAAACAAGTGTCGTACTTTTTCTTAATATAAG AAAGCTGATGGACTCCCAGCCTGAAAATGTGCATTACAAAGACACTATCCTTAACAACCTGCTGCACATTTCTATCCAGA AGAATCTTACACTTTCGAACCGCATATTCTGCACTTCTCCTAAGACCATCCGCGACAGACTTCTTATCTATCTATCCAAT GAATCAAGAAAAGCAGGATGCGAAGAGTTCTCTATTCCTTTTGACCGCCAGCAGCTTGCCGATTATCTTAATGTCGACCG CACGGCACTTTCTAAAGAGCTAGGTAAAATGCGCGATGACGGGCTTATTGAATTCAGAAAAAATGTGTTTCATCTGCTCA GCATTTGTTAA
Upstream 100 bases:
>100_bases ATAATAATATAATGAGCATAATAAATATGTTGTTTTAACCACATTTTTGAAAATTTATTAGAAATGTATTTAGATTTAAC TAATAATAAAAGGAGAGCTT
Downstream 100 bases:
>100_bases GAATACTGTTCTATGAACCGTTTCACCACTGGTCTTATCGGTGGTGAAATGTTATCAATATCTATATCCTCCAGATTAAA GAATCTCAGTTCCTCAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulatory Protein; Transcriptional Regulator; Regulatory Protein; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator Crp Family; CAMP-Regulatory Protein
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MAIIKSPVFKDISEAEISEMTSAGFLRARKFRKKAIIYHVTDIVHEIGIVASGQVTIEYIDMWGNKAIMSNIAPGQVFAE TYALSGEPLMVDAVASETSVVLFLNIRKLMDSQPENVHYKDTILNNLLHISIQKNLTLSNRIFCTSPKTIRDRLLIYLSN ESRKAGCEEFSIPFDRQQLADYLNVDRTALSKELGKMRDDGLIEFRKNVFHLLSIC
Sequences:
>Translated_216_residues MAIIKSPVFKDISEAEISEMTSAGFLRARKFRKKAIIYHVTDIVHEIGIVASGQVTIEYIDMWGNKAIMSNIAPGQVFAE TYALSGEPLMVDAVASETSVVLFLNIRKLMDSQPENVHYKDTILNNLLHISIQKNLTLSNRIFCTSPKTIRDRLLIYLSN ESRKAGCEEFSIPFDRQQLADYLNVDRTALSKELGKMRDDGLIEFRKNVFHLLSIC >Mature_215_residues AIIKSPVFKDISEAEISEMTSAGFLRARKFRKKAIIYHVTDIVHEIGIVASGQVTIEYIDMWGNKAIMSNIAPGQVFAET YALSGEPLMVDAVASETSVVLFLNIRKLMDSQPENVHYKDTILNNLLHISIQKNLTLSNRIFCTSPKTIRDRLLIYLSNE SRKAGCEEFSIPFDRQQLADYLNVDRTALSKELGKMRDDGLIEFRKNVFHLLSIC
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24459; Mature: 24327
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIIKSPVFKDISEAEISEMTSAGFLRARKFRKKAIIYHVTDIVHEIGIVASGQVTIEYI CCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEEEE DMWGNKAIMSNIAPGQVFAETYALSGEPLMVDAVASETSVVLFLNIRKLMDSQPENVHYK ECCCCHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEEEHHHHHCCCCCCCCHH DTILNNLLHISIQKNLTLSNRIFCTSPKTIRDRLLIYLSNESRKAGCEEFSIPFDRQQLA HHHHHHHEEEEEECCCEECCEEEECCCHHHHCEEEEEEECCCCCCCCCCCCCCCCHHHHH DYLNVDRTALSKELGKMRDDGLIEFRKNVFHLLSIC HHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure AIIKSPVFKDISEAEISEMTSAGFLRARKFRKKAIIYHVTDIVHEIGIVASGQVTIEYI CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEEEE DMWGNKAIMSNIAPGQVFAETYALSGEPLMVDAVASETSVVLFLNIRKLMDSQPENVHYK ECCCCHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEEEHHHHHCCCCCCCCHH DTILNNLLHISIQKNLTLSNRIFCTSPKTIRDRLLIYLSNESRKAGCEEFSIPFDRQQLA HHHHHHHEEEEEECCCEECCEEEECCCHHHHCEEEEEEECCCCCCCCCCCCCCCCHHHHH DYLNVDRTALSKELGKMRDDGLIEFRKNVFHLLSIC HHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA