Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
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Accession | NC_012778 |
Length | 2,144,190 |
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The map label for this gene is 238917297
Identifier: 238917297
GI number: 238917297
Start: 1412588
End: 1414012
Strand: Direct
Name: 238917297
Synonym: EUBELI_01372
Alternate gene names: NA
Gene position: 1412588-1414012 (Clockwise)
Preceding gene: 238917290
Following gene: 238917300
Centisome position: 65.88
GC content: 37.4
Gene sequence:
>1425_bases ATGATTCGAATTAAACTGAAACAATATTTAGGCAGCATAGTAACAATTGCTGCTGTCCTGTTTTTATTTGTTGTATTGTT TTCTTCTCCAGTAATGGCTGATGAAAATACTGCCTCAGAGGTAAATACTACAATAACACTTTCAAACAGCGGAAACGTAA GTAAAATGACAGATGGTTCTTACAACACAAAAACCTCATTTGCTTCTGGCGATTCCATAACTGTAACCGGAAAGGATAAA ATATATTCTCTCTATATCAAATGGGATCTTGTTCCGGATGAATGGACTCTAAGCTATAATGGTACAACGAAAACATATGG AACTAACGGATTTCTGCATGAATATGTTGAAATTCCAGAAGGCGCTGAAACACTTACGATTACATTTTCTTCAAATGAAG CAATATGTGACCTGCATGCATATTCAGCCGGCACAGCACCTTCAGATGTACAGGCATGGAAAACGCCTTGTGATAAAGCA GATATACTTGTGTTTGCAACTCATGCCGATGATGAAATTCTTTTCCTGGGAGGAGTACTTGCAACATATGGAGGCGAGCA GGATTTAGCTGTACAGGTTGCATATATGTGTGAATTCACATCGTCTGCCAAGATAAGAGAACATGAGAAATTAGATGGTT TATGGGAATCCGGCATCAAACATTATCCTATATGCGGTGATTTCCCTGATTTATACAGCACATCCTTAGAAGCTGCCAAA AAACAATACATATATGATGATGTGTTATCATATACAACTTCAACCATAAGACGTTTTAAACCCCTTGTGGTTGTAACGCA GGATCTTAATGGTGAATATGGGCACGGCGGTCACATGCTTTTCTCACATGCAGTAGCAGAATCTGTAGAATCAAGCAGCG AGCCATCATATTTTCCTGATTCAGCTTCAAAATACGGAACATGGGATGTTCCTAAAACTTACCTTCATCTGTATTCAGAT AATAAAATCACAATGAATTTAAGGCTTCCTCTTTCCCGAATGGGAAACAGAACATCTATTGAAGTTCAGACTGCTGCATA TAAAAAACATGTATCACAGCAGTGGTGCTGGTTCTATGTTTCAGATGACTATGAATACAGCTGTGCTGACTTTGGTTTAT ACAGAACAACCGTTGGCAATGACTCTGGTAATGATATGCTGGAAAATATAACAACATACGAAGAACAGGAAAAAATCGAA AAAGAAAAAGCGGAAAAAGAATCAGTCGAAGCATCTATTGCAGCAGAAGAATCAAGTATAGCAGATGTAAAAAGCAATAC ATCCAATTCCACCAGACAGTCTGGCAGGAAAATAATAATTTTTGCAGCACTCATATTAATTGTTATCATAATATTATTTG CTGCCTACAGATATTATCAGCTGATACAGTCAAGAAAAAGACATCGTCGTCATAAAAGGAAGTAA
Upstream 100 bases:
>100_bases GTTTAGGTTTTTATTATAACATATTGCTTTCAATCCTTGAAAGTATGTGTTCATTATGTTTATAATAATAAGGAAATTTT AATAAGGAATGGTATAATAT
Downstream 100 bases:
>100_bases ATAATATATGGAATTATTAATCAATATAATTGCAATTTTACTCGTTGCAGTAATAATCGGATTCCAGTTTTCCAGAACCC GTAATTTATACAAAAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MIRIKLKQYLGSIVTIAAVLFLFVVLFSSPVMADENTASEVNTTITLSNSGNVSKMTDGSYNTKTSFASGDSITVTGKDK IYSLYIKWDLVPDEWTLSYNGTTKTYGTNGFLHEYVEIPEGAETLTITFSSNEAICDLHAYSAGTAPSDVQAWKTPCDKA DILVFATHADDEILFLGGVLATYGGEQDLAVQVAYMCEFTSSAKIREHEKLDGLWESGIKHYPICGDFPDLYSTSLEAAK KQYIYDDVLSYTTSTIRRFKPLVVVTQDLNGEYGHGGHMLFSHAVAESVESSSEPSYFPDSASKYGTWDVPKTYLHLYSD NKITMNLRLPLSRMGNRTSIEVQTAAYKKHVSQQWCWFYVSDDYEYSCADFGLYRTTVGNDSGNDMLENITTYEEQEKIE KEKAEKESVEASIAAEESSIADVKSNTSNSTRQSGRKIIIFAALILIVIIILFAAYRYYQLIQSRKRHRRHKRK
Sequences:
>Translated_474_residues MIRIKLKQYLGSIVTIAAVLFLFVVLFSSPVMADENTASEVNTTITLSNSGNVSKMTDGSYNTKTSFASGDSITVTGKDK IYSLYIKWDLVPDEWTLSYNGTTKTYGTNGFLHEYVEIPEGAETLTITFSSNEAICDLHAYSAGTAPSDVQAWKTPCDKA DILVFATHADDEILFLGGVLATYGGEQDLAVQVAYMCEFTSSAKIREHEKLDGLWESGIKHYPICGDFPDLYSTSLEAAK KQYIYDDVLSYTTSTIRRFKPLVVVTQDLNGEYGHGGHMLFSHAVAESVESSSEPSYFPDSASKYGTWDVPKTYLHLYSD NKITMNLRLPLSRMGNRTSIEVQTAAYKKHVSQQWCWFYVSDDYEYSCADFGLYRTTVGNDSGNDMLENITTYEEQEKIE KEKAEKESVEASIAAEESSIADVKSNTSNSTRQSGRKIIIFAALILIVIIILFAAYRYYQLIQSRKRHRRHKRK >Mature_474_residues MIRIKLKQYLGSIVTIAAVLFLFVVLFSSPVMADENTASEVNTTITLSNSGNVSKMTDGSYNTKTSFASGDSITVTGKDK IYSLYIKWDLVPDEWTLSYNGTTKTYGTNGFLHEYVEIPEGAETLTITFSSNEAICDLHAYSAGTAPSDVQAWKTPCDKA DILVFATHADDEILFLGGVLATYGGEQDLAVQVAYMCEFTSSAKIREHEKLDGLWESGIKHYPICGDFPDLYSTSLEAAK KQYIYDDVLSYTTSTIRRFKPLVVVTQDLNGEYGHGGHMLFSHAVAESVESSSEPSYFPDSASKYGTWDVPKTYLHLYSD NKITMNLRLPLSRMGNRTSIEVQTAAYKKHVSQQWCWFYVSDDYEYSCADFGLYRTTVGNDSGNDMLENITTYEEQEKIE KEKAEKESVEASIAAEESSIADVKSNTSNSTRQSGRKIIIFAALILIVIIILFAAYRYYQLIQSRKRHRRHKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53173; Mature: 53173
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIKLKQYLGSIVTIAAVLFLFVVLFSSPVMADENTASEVNTTITLSNSGNVSKMTDGS CEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCC YNTKTSFASGDSITVTGKDKIYSLYIKWDLVPDEWTLSYNGTTKTYGTNGFLHEYVEIPE CCCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHCCCC GAETLTITFSSNEAICDLHAYSAGTAPSDVQAWKTPCDKADILVFATHADDEILFLGGVL CCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCEEEECCHH ATYGGEQDLAVQVAYMCEFTSSAKIREHEKLDGLWESGIKHYPICGDFPDLYSTSLEAAK HHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH KQYIYDDVLSYTTSTIRRFKPLVVVTQDLNGEYGHGGHMLFSHAVAESVESSSEPSYFPD HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC SASKYGTWDVPKTYLHLYSDNKITMNLRLPLSRMGNRTSIEVQTAAYKKHVSQQWCWFYV CCCCCCCCCCCCCEEEEEECCEEEEEEECCHHHCCCCCEEEEEHHHHHHHCCCCEEEEEE SDDYEYSCADFGLYRTTVGNDSGNDMLENITTYEEQEKIEKEKAEKESVEASIAAEESSI CCCCCCCHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ADVKSNTSNSTRQSGRKIIIFAALILIVIIILFAAYRYYQLIQSRKRHRRHKRK HHHHCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIRIKLKQYLGSIVTIAAVLFLFVVLFSSPVMADENTASEVNTTITLSNSGNVSKMTDGS CEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCC YNTKTSFASGDSITVTGKDKIYSLYIKWDLVPDEWTLSYNGTTKTYGTNGFLHEYVEIPE CCCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHCCCC GAETLTITFSSNEAICDLHAYSAGTAPSDVQAWKTPCDKADILVFATHADDEILFLGGVL CCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCEEEECCHH ATYGGEQDLAVQVAYMCEFTSSAKIREHEKLDGLWESGIKHYPICGDFPDLYSTSLEAAK HHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH KQYIYDDVLSYTTSTIRRFKPLVVVTQDLNGEYGHGGHMLFSHAVAESVESSSEPSYFPD HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC SASKYGTWDVPKTYLHLYSDNKITMNLRLPLSRMGNRTSIEVQTAAYKKHVSQQWCWFYV CCCCCCCCCCCCCEEEEEECCEEEEEEECCHHHCCCCCEEEEEHHHHHHHCCCCEEEEEE SDDYEYSCADFGLYRTTVGNDSGNDMLENITTYEEQEKIEKEKAEKESVEASIAAEESSI CCCCCCCHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ADVKSNTSNSTRQSGRKIIIFAALILIVIIILFAAYRYYQLIQSRKRHRRHKRK HHHHCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA