Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
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Accession | NC_012778 |
Length | 2,144,190 |
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The map label for this gene is 238917242
Identifier: 238917242
GI number: 238917242
Start: 1352942
End: 1354111
Strand: Direct
Name: 238917242
Synonym: EUBELI_01316
Alternate gene names: NA
Gene position: 1352942-1354111 (Clockwise)
Preceding gene: 238917203
Following gene: 238917244
Centisome position: 63.1
GC content: 38.38
Gene sequence:
>1170_bases ATGAAGAAAATCATCAGAATATATATTGCAATTATTGCATCTGTATGCCTGTTCATGTCATTTTCAGCTGATATATATGC CGTTGTTATAGATGTGAGCAGCTATAATGGATTCATACAGTGGGATAATATGAAAAACTATATTGAGGGTACAATTATCC GTATAGGATATGGCAATGATATCCAATCACAGGATGATGCTGCTGCCATAAGAAATATGGATGAATGTGAAAGGCTTGGA ATTCCTTACGGCGTCTATCTATACAGTTATGCATTAGATTATTACGATGCAGCAAGCGAAACTGCCCATGCGCTAAGACT TCTTAAAGGTAGATCTCCCGAACTTGGTGTGTGGTTTGATATGGAAGATGCTGATGGATATAAAGCAAGAAACGGTCTGG ATGTATACTCCGAAGGCGAACTGCTGTCTGATTTCTGCGAAATGTTTGTTAATGCTATGCGTGTCAGCGGATATAAAACC GGCGTCTATGCCAATTACAACTATTTTACAAATGTGCTTAACCTTGACAGACTGAAATCAATCCCAGAGATGAATATCTG GCTTGCGCACTGGGGAATTGATTCTCCAAGCCTTGACTGTACCATGTGGCAGTTTGGTGCAGTAGAAATCGAAGATGAAG AATATGATGGCAATATATATTACTCAGATTATTCTGTAAAAAATGATGGCAATACTGATGAAACTATCCGTACCGATGAT AGTTCATCCAATAATATAAATGTTTACTATCAGACAAAGCTTGCAACGGGTCGCTGGCTTCCTGTTGTTAAGAATAATGA TGACTACGCCGGAATATCCGGTCAGAGAATTACCGGTCTTGCAGTCACAACAGATACCGGCTATATAAAATACAGAGTCC ATGTAAATAATGGCTGGCTTGGTTTCATAGACAGCCGCAACACTGATATTAACGATTATTATAACGGATATGCCGGCAAT GACACACCTGTTGATGCTGTTGAGATATATTATTACACCCCTGATGATATTATTAATTCATCAGGTTATCATTATGCATT CTACAGGGTAAGCCCTAGGAATAACAATTACTACAGTTTGCAAAAAGACAACAACACTGATAACGGAATGGATGGCTATG CCGGCATTTTCGGACATTTCATTGACAGAATACAGATTAATATAAAATAG
Upstream 100 bases:
>100_bases GCTTCAGTTTCACGCTACACTGTGCATCACCTTCCCTCCTCACTCTCCATCATCTTTCGAATATTCTATATTAGAACATT AAAAGAAAGGGGCTATGTAA
Downstream 100 bases:
>100_bases CATACAAAACAAAAACTGCCGGTAAGAATTACATGCCGCTCATAAAAATCCGACTTAAAATCTGACATCTGACGAGCGGT AGTACACTTACCGGCAATTA
Product: glycoside hydrolase family 25-like lysozyme/endolysin
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKKIIRIYIAIIASVCLFMSFSADIYAVVIDVSSYNGFIQWDNMKNYIEGTIIRIGYGNDIQSQDDAAAIRNMDECERLG IPYGVYLYSYALDYYDAASETAHALRLLKGRSPELGVWFDMEDADGYKARNGLDVYSEGELLSDFCEMFVNAMRVSGYKT GVYANYNYFTNVLNLDRLKSIPEMNIWLAHWGIDSPSLDCTMWQFGAVEIEDEEYDGNIYYSDYSVKNDGNTDETIRTDD SSSNNINVYYQTKLATGRWLPVVKNNDDYAGISGQRITGLAVTTDTGYIKYRVHVNNGWLGFIDSRNTDINDYYNGYAGN DTPVDAVEIYYYTPDDIINSSGYHYAFYRVSPRNNNYYSLQKDNNTDNGMDGYAGIFGHFIDRIQINIK
Sequences:
>Translated_389_residues MKKIIRIYIAIIASVCLFMSFSADIYAVVIDVSSYNGFIQWDNMKNYIEGTIIRIGYGNDIQSQDDAAAIRNMDECERLG IPYGVYLYSYALDYYDAASETAHALRLLKGRSPELGVWFDMEDADGYKARNGLDVYSEGELLSDFCEMFVNAMRVSGYKT GVYANYNYFTNVLNLDRLKSIPEMNIWLAHWGIDSPSLDCTMWQFGAVEIEDEEYDGNIYYSDYSVKNDGNTDETIRTDD SSSNNINVYYQTKLATGRWLPVVKNNDDYAGISGQRITGLAVTTDTGYIKYRVHVNNGWLGFIDSRNTDINDYYNGYAGN DTPVDAVEIYYYTPDDIINSSGYHYAFYRVSPRNNNYYSLQKDNNTDNGMDGYAGIFGHFIDRIQINIK >Mature_389_residues MKKIIRIYIAIIASVCLFMSFSADIYAVVIDVSSYNGFIQWDNMKNYIEGTIIRIGYGNDIQSQDDAAAIRNMDECERLG IPYGVYLYSYALDYYDAASETAHALRLLKGRSPELGVWFDMEDADGYKARNGLDVYSEGELLSDFCEMFVNAMRVSGYKT GVYANYNYFTNVLNLDRLKSIPEMNIWLAHWGIDSPSLDCTMWQFGAVEIEDEEYDGNIYYSDYSVKNDGNTDETIRTDD SSSNNINVYYQTKLATGRWLPVVKNNDDYAGISGQRITGLAVTTDTGYIKYRVHVNNGWLGFIDSRNTDINDYYNGYAGN DTPVDAVEIYYYTPDDIINSSGYHYAFYRVSPRNNNYYSLQKDNNTDNGMDGYAGIFGHFIDRIQINIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44402; Mature: 44402
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIRIYIAIIASVCLFMSFSADIYAVVIDVSSYNGFIQWDNMKNYIEGTIIRIGYGND CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCCEEEEEEECCCC IQSQDDAAAIRNMDECERLGIPYGVYLYSYALDYYDAASETAHALRLLKGRSPELGVWFD CCCCCHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEE MEDADGYKARNGLDVYSEGELLSDFCEMFVNAMRVSGYKTGVYANYNYFTNVLNLDRLKS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHCCHHHHHC IPEMNIWLAHWGIDSPSLDCTMWQFGAVEIEDEEYDGNIYYSDYSVKNDGNTDETIRTDD CCCCEEEEEEECCCCCCCEEEEEEECEEEEECCCCCCEEEEEEEEECCCCCCCCEEECCC SSSNNINVYYQTKLATGRWLPVVKNNDDYAGISGQRITGLAVTTDTGYIKYRVHVNNGWL CCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCEE GFIDSRNTDINDYYNGYAGNDTPVDAVEIYYYTPDDIINSSGYHYAFYRVSPRNNNYYSL EEEECCCCCCHHHCCCCCCCCCCCCEEEEEEECCHHHHCCCCCEEEEEEECCCCCCEEEE QKDNNTDNGMDGYAGIFGHFIDRIQINIK ECCCCCCCCCCHHHHHHHHHEEEEEEEEC >Mature Secondary Structure MKKIIRIYIAIIASVCLFMSFSADIYAVVIDVSSYNGFIQWDNMKNYIEGTIIRIGYGND CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCCEEEEEEECCCC IQSQDDAAAIRNMDECERLGIPYGVYLYSYALDYYDAASETAHALRLLKGRSPELGVWFD CCCCCHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEE MEDADGYKARNGLDVYSEGELLSDFCEMFVNAMRVSGYKTGVYANYNYFTNVLNLDRLKS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHCCHHHHHC IPEMNIWLAHWGIDSPSLDCTMWQFGAVEIEDEEYDGNIYYSDYSVKNDGNTDETIRTDD CCCCEEEEEEECCCCCCCEEEEEEECEEEEECCCCCCEEEEEEEEECCCCCCCCEEECCC SSSNNINVYYQTKLATGRWLPVVKNNDDYAGISGQRITGLAVTTDTGYIKYRVHVNNGWL CCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCEE GFIDSRNTDINDYYNGYAGNDTPVDAVEIYYYTPDDIINSSGYHYAFYRVSPRNNNYYSL EEEECCCCCCHHHCCCCCCCCCCCCEEEEEEECCHHHHCCCCCEEEEEEECCCCCCEEEE QKDNNTDNGMDGYAGIFGHFIDRIQINIK ECCCCCCCCCCHHHHHHHHHEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA