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The map label for this gene is ygiV [H]

Identifier: 238896531

GI number: 238896531

Start: 4512705

End: 4513574

Strand: Reverse

Name: ygiV [H]

Synonym: KP1_4718

Alternate gene names: 238896531

Gene position: 4513574-4512705 (Counterclockwise)

Preceding gene: 238896532

Following gene: 238896530

Centisome position: 86.0

GC content: 57.82

Gene sequence:

>870_bases
ATGAACGATATTAAGGCCAGCCCGGCGTATGTCGGGCGCTTCCAGCGCGTCTGTAGGTACATTGCGCGCCATCTTGATGA
GCCGCTGTCGTTGGAGACGCTGAGCGCGATAGCGCACAGTTCGCCTTACCATTTTCACCGGCAATTTAGCGCTTATACCG
GCATTCCATTGTACCGGTATATTCAGTGGTTGCGTCTGCGACGCGCCTGTTGGCGCCTGGCGTTCAACCCCCGCGATAAA
GTCATCGATATTGCCCTTGATGCCGGATTTCAGAATGCGGAGTCGTTCAGTCGTGCCTTCCGTACCGCGTTTGACCAAAG
CCCGACCCAATTCCGTCAACAACCGGACTGGGCCGAGTGGCATCGACGCGTACCGAAACATACGCTACAGGAGCAAACGT
CGATGGACGTCAACATTATTTCGTGCCCCTCCACCCGGATAGCCGTACTGCAACATCGCGGTAGCCCGGACCTTGTCAAC
GCCACCGCCGCGCGTTTTATCGCCTGGCGTAAGACGAGCGGACTATCGCCCGTCGCCACCAGCGATACCTGGGGGATCGC
CTGGGACGATCCGCAGACCACCCCGCAGGAGGCATTTCGTTTTGATATCTGCGGTACGGTCGATCGGCCGGTTGGTGAAA
ACGCCTTTGGCGTGATTAACGGCGAAATCCCCGGCGGACGCTGCGCCGTCGTGCGCCATCACGGCTCGCTGGACACGCTG
GCGAACAGCGTTTGGTTTCTCTATCGCGACTGGTTACCCGCTTCAGGCGAGACGTTACGGGATTTTCCGGTGTACTTCCG
TTACCTCAATTTTGTCCATGAGGTGGCTGAGCATGAACTGCAAACCGATATTTATCTGCCGCTGGCCTGA

Upstream 100 bases:

>100_bases
AGATCCGTAAAATCGCGCCATAAGTCTCCGTCGGATAAGCGCAAGATCGGTCAGGAATCGCGATCCTCGCTCTGTCAGAG
TATGTCGCGAGGAGGAGACG

Downstream 100 bases:

>100_bases
TTAAGCGTGACGGAATCCTCAGCCGATCTCACGGCCTGTGACTCAGGGCGTGAGATCGGGTATTATCGCGGGTAGTTTTG
CCGTCCGAACGGTCGGTACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MNDIKASPAYVGRFQRVCRYIARHLDEPLSLETLSAIAHSSPYHFHRQFSAYTGIPLYRYIQWLRLRRACWRLAFNPRDK
VIDIALDAGFQNAESFSRAFRTAFDQSPTQFRQQPDWAEWHRRVPKHTLQEQTSMDVNIISCPSTRIAVLQHRGSPDLVN
ATAARFIAWRKTSGLSPVATSDTWGIAWDDPQTTPQEAFRFDICGTVDRPVGENAFGVINGEIPGGRCAVVRHHGSLDTL
ANSVWFLYRDWLPASGETLRDFPVYFRYLNFVHEVAEHELQTDIYLPLA

Sequences:

>Translated_289_residues
MNDIKASPAYVGRFQRVCRYIARHLDEPLSLETLSAIAHSSPYHFHRQFSAYTGIPLYRYIQWLRLRRACWRLAFNPRDK
VIDIALDAGFQNAESFSRAFRTAFDQSPTQFRQQPDWAEWHRRVPKHTLQEQTSMDVNIISCPSTRIAVLQHRGSPDLVN
ATAARFIAWRKTSGLSPVATSDTWGIAWDDPQTTPQEAFRFDICGTVDRPVGENAFGVINGEIPGGRCAVVRHHGSLDTL
ANSVWFLYRDWLPASGETLRDFPVYFRYLNFVHEVAEHELQTDIYLPLA
>Mature_289_residues
MNDIKASPAYVGRFQRVCRYIARHLDEPLSLETLSAIAHSSPYHFHRQFSAYTGIPLYRYIQWLRLRRACWRLAFNPRDK
VIDIALDAGFQNAESFSRAFRTAFDQSPTQFRQQPDWAEWHRRVPKHTLQEQTSMDVNIISCPSTRIAVLQHRGSPDLVN
ATAARFIAWRKTSGLSPVATSDTWGIAWDDPQTTPQEAFRFDICGTVDRPVGENAFGVINGEIPGGRCAVVRHHGSLDTL
ANSVWFLYRDWLPASGETLRDFPVYFRYLNFVHEVAEHELQTDIYLPLA

Specific function: Represses expression of mcbR [H]

COG id: COG3449

COG function: function code L; DNA gyrase inhibitor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994918, Length=156, Percent_Identity=55.7692307692308, Blast_Score=191, Evalue=6e-50,
Organism=Escherichia coli, GI1790857, Length=102, Percent_Identity=37.2549019607843, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010499
- InterPro:   IPR011256 [H]

Pfam domain/function: PF06445 AraC_E_bind [H]

EC number: NA

Molecular weight: Translated: 33182; Mature: 33182

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDIKASPAYVGRFQRVCRYIARHLDEPLSLETLSAIAHSSPYHFHRQFSAYTGIPLYRY
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHH
IQWLRLRRACWRLAFNPRDKVIDIALDAGFQNAESFSRAFRTAFDQSPTQFRQQPDWAEW
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHH
HRRVPKHTLQEQTSMDVNIISCPSTRIAVLQHRGSPDLVNATAARFIAWRKTSGLSPVAT
HHHCHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
SDTWGIAWDDPQTTPQEAFRFDICGTVDRPVGENAFGVINGEIPGGRCAVVRHHGSLDTL
CCCCCEEECCCCCCHHHHHEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCHHHH
ANSVWFLYRDWLPASGETLRDFPVYFRYLNFVHEVAEHELQTDIYLPLA
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure
MNDIKASPAYVGRFQRVCRYIARHLDEPLSLETLSAIAHSSPYHFHRQFSAYTGIPLYRY
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHH
IQWLRLRRACWRLAFNPRDKVIDIALDAGFQNAESFSRAFRTAFDQSPTQFRQQPDWAEW
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHH
HRRVPKHTLQEQTSMDVNIISCPSTRIAVLQHRGSPDLVNATAARFIAWRKTSGLSPVAT
HHHCHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
SDTWGIAWDDPQTTPQEAFRFDICGTVDRPVGENAFGVINGEIPGGRCAVVRHHGSLDTL
CCCCCEEECCCCCCHHHHHEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCHHHH
ANSVWFLYRDWLPASGETLRDFPVYFRYLNFVHEVAEHELQTDIYLPLA
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]