Click here to switch to the map view.

The map label for this gene is yqhA [C]

Identifier: 238896515

GI number: 238896515

Start: 4494537

End: 4495031

Strand: Reverse

Name: yqhA [C]

Synonym: KP1_4699

Alternate gene names: 238896515

Gene position: 4495031-4494537 (Counterclockwise)

Preceding gene: 238896516

Following gene: 238896514

Centisome position: 85.64

GC content: 50.3

Gene sequence:

>495_bases
ATGGAACGCTTTCTGGAAAATGCTATGTACGCCTCGCGCTGGCTGCTGGCGCCGGTTTATTTTGGCCTCTCGCTCGGTCT
GATTGCGCTGACCATCAAATTTTTTCAGGAGATCTTCCACATACTGCCGCATATTTTTAGCGTCAGCGAGTCGGATATGA
TTCTGACCCTGCTGTCGCTGGTGGATATGACCCTGGTGGGCGGTTTGCTGGTGATGGTGATGTTCTCCGGGTATGAAAAT
TTTGTCTCGCAGCTGGATATTAACGAGGGTAAAGAAAAACTCAGCTGGCTGGGCAAAATGGACGCGACTTCGCTGAAAAA
TAAGGTTGCCGCCTCCATCGTGGCGATCTCCTCTATTCACCTGCTGCGGGTGTTTATGGATGCGAAAAACGTCCCGGACA
ATAAGCTGATGTGGTACGTGATTATCCACCTGACCTTCGTGCTTTCGGCCTTTGTGATGGGCTACCTTGATCGTCTGACC
AAAGTGAAACACTGA

Upstream 100 bases:

>100_bases
CGTTTCTGGCCGCCTGCAGATGACGCGGGCGGCTGATGTTGCATAAGCGTTACCCTGTTGCGATATAATGGCGGCCGTTT
ATGTTAACTGACAGGATCTT

Downstream 100 bases:

>100_bases
TCCCTTCTCTCCCGGCGGTGTTAGCCGCTGGGCTGTTTCTCCCTGTTTCATGCTTTTCTGGGCTGGCGTATGTCCGGGCT
TCTGCTTTGCTTAAAGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MERFLENAMYASRWLLAPVYFGLSLGLIALTIKFFQEIFHILPHIFSVSESDMILTLLSLVDMTLVGGLLVMVMFSGYEN
FVSQLDINEGKEKLSWLGKMDATSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
KVKH

Sequences:

>Translated_164_residues
MERFLENAMYASRWLLAPVYFGLSLGLIALTIKFFQEIFHILPHIFSVSESDMILTLLSLVDMTLVGGLLVMVMFSGYEN
FVSQLDINEGKEKLSWLGKMDATSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
KVKH
>Mature_164_residues
MERFLENAMYASRWLLAPVYFGLSLGLIALTIKFFQEIFHILPHIFSVSESDMILTLLSLVDMTLVGGLLVMVMFSGYEN
FVSQLDINEGKEKLSWLGKMDATSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
KVKH

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family

Homologues:

Organism=Escherichia coli, GI1789376, Length=164, Percent_Identity=89.6341463414634, Blast_Score=286, Evalue=5e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3357_KLEP7 (A6TDZ7)

Other databases:

- EMBL:   CP000647
- RefSeq:   YP_001337048.1
- STRING:   A6TDZ7
- GeneID:   5340578
- GenomeReviews:   CP000647_GR
- KEGG:   kpn:KPN_03422
- eggNOG:   COG2862
- HOGENOM:   HBG474035
- OMA:   MVIIGGY
- ProtClustDB:   PRK05208
- HAMAP:   MF_00143
- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765
- TIGRFAMs:   TIGR00645

Pfam domain/function: PF03350 UPF0114

EC number: NA

Molecular weight: Translated: 18638; Mature: 18638

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1fcce410)-; HASH(0x1fed6330)-; HASH(0x1fc2f308)-; HASH(0x202cd070)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFLENAMYASRWLLAPVYFGLSLGLIALTIKFFQEIFHILPHIFSVSESDMILTLLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VDMTLVGGLLVMVMFSGYENFVSQLDINEGKEKLSWLGKMDATSLKNKVAASIVAISSIH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLTKVKH
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MERFLENAMYASRWLLAPVYFGLSLGLIALTIKFFQEIFHILPHIFSVSESDMILTLLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VDMTLVGGLLVMVMFSGYENFVSQLDINEGKEKLSWLGKMDATSLKNKVAASIVAISSIH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLTKVKH
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA