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The map label for this gene is yddH [H]

Identifier: 238896068

GI number: 238896068

Start: 4034881

End: 4035606

Strand: Direct

Name: yddH [H]

Synonym: KP1_4201

Alternate gene names: 238896068

Gene position: 4034881-4035606 (Clockwise)

Preceding gene: 238896065

Following gene: 238896070

Centisome position: 76.88

GC content: 52.34

Gene sequence:

>726_bases
ATGAATAATGAAAACAATTTACGCACCTTTTTACGCTTAATCGCCTGGCGTATCGTTGCACGGTGGATTACGAAAGGGGG
CCCGAAAATGAACATGCCCTCAATAAATATCCAGATAATCATTACGTTAAATAGCATGCACAAAGGAAAAACCATGTCCG
TTCAGCCTGTCGAAATAAGTAAGGCCTATCGTTTATTGCAGGTCGGGTCCACCACCATGATTTCCGCAAAATATGATGGC
GTCGAAAATGTCATGTCAGCCGCCTGGGTTGGGCTGGCAGGCGAGCGAAAAGTGGTGGCCTATATTGGCACCCAGGCTTT
CACTCGTCAGCTGGTGGAAAAGAGCGGCTATTTCGTGGTGCAGATCCCCGTAGTCAGCCAGATGGCAACCGTCCTCTACG
CTGGCGGGCGCAGCTATGCCGACGCGCCGGATAAAAATGACACCATCCCCTTCTTTTATCAGCCGGAATTTGATCTTCCT
CTTGTGGCAGGCTGTGCGGGCTGGCTGGTGTGCAAAGTGATGCCCTACCCGGACATTCAGCAGCAACACAATCTGTTTAT
GGGCGATATCGTCGCCGCCTGGAGCGATGACCGGGTATTCCGCAACGGACACTGGATCTTTGATGATGCGCCGGACGAGC
TACGGACCGTTCACTATGTCGCAGGCGGGCAGTTCTATGCCATCGGCAAAGGCAGCAAATTCGAACATGGGCCGGGTCAG
GACTGA

Upstream 100 bases:

>100_bases
CGCGACGCGCATAAACATCTGCATAGCCTGAATACGATCCACCTTCTTTCTCTCCTGTAGCGAGCAGCTTACCGACAGAC
GGCATGATTATTCGTGTATT

Downstream 100 bases:

>100_bases
CCCTCCCCGGTCATGCGGATCGCTGACGAGATGTCTGCGCAACAGAGCGGCTGATACTCCGGCGCCAGACGCCGGGCGCC
TGGCCGTACTGGCGCTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNNENNLRTFLRLIAWRIVARWITKGGPKMNMPSINIQIIITLNSMHKGKTMSVQPVEISKAYRLLQVGSTTMISAKYDG
VENVMSAAWVGLAGERKVVAYIGTQAFTRQLVEKSGYFVVQIPVVSQMATVLYAGGRSYADAPDKNDTIPFFYQPEFDLP
LVAGCAGWLVCKVMPYPDIQQQHNLFMGDIVAAWSDDRVFRNGHWIFDDAPDELRTVHYVAGGQFYAIGKGSKFEHGPGQ
D

Sequences:

>Translated_241_residues
MNNENNLRTFLRLIAWRIVARWITKGGPKMNMPSINIQIIITLNSMHKGKTMSVQPVEISKAYRLLQVGSTTMISAKYDG
VENVMSAAWVGLAGERKVVAYIGTQAFTRQLVEKSGYFVVQIPVVSQMATVLYAGGRSYADAPDKNDTIPFFYQPEFDLP
LVAGCAGWLVCKVMPYPDIQQQHNLFMGDIVAAWSDDRVFRNGHWIFDDAPDELRTVHYVAGGQFYAIGKGSKFEHGPGQ
D
>Mature_241_residues
MNNENNLRTFLRLIAWRIVARWITKGGPKMNMPSINIQIIITLNSMHKGKTMSVQPVEISKAYRLLQVGSTTMISAKYDG
VENVMSAAWVGLAGERKVVAYIGTQAFTRQLVEKSGYFVVQIPVVSQMATVLYAGGRSYADAPDKNDTIPFFYQPEFDLP
LVAGCAGWLVCKVMPYPDIQQQHNLFMGDIVAAWSDDRVFRNGHWIFDDAPDELRTVHYVAGGQFYAIGKGSKFEHGPGQ
D

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=183, Percent_Identity=34.9726775956284, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 26927; Mature: 26927

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNENNLRTFLRLIAWRIVARWITKGGPKMNMPSINIQIIITLNSMHKGKTMSVQPVEIS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCCHHH
KAYRLLQVGSTTMISAKYDGVENVMSAAWVGLAGERKVVAYIGTQAFTRQLVEKSGYFVV
HHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCEEE
QIPVVSQMATVLYAGGRSYADAPDKNDTIPFFYQPEFDLPLVAGCAGWLVCKVMPYPDIQ
EECHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHEEEEEECCCCCCH
QQHNLFMGDIVAAWSDDRVFRNGHWIFDDAPDELRTVHYVAGGQFYAIGKGSKFEHGPGQ
HHCCCEEEHEEEECCCCEEEECCCEEECCCCHHHEEEEEEECCEEEEECCCCCCCCCCCC
D
C
>Mature Secondary Structure
MNNENNLRTFLRLIAWRIVARWITKGGPKMNMPSINIQIIITLNSMHKGKTMSVQPVEIS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCCHHH
KAYRLLQVGSTTMISAKYDGVENVMSAAWVGLAGERKVVAYIGTQAFTRQLVEKSGYFVV
HHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCEEE
QIPVVSQMATVLYAGGRSYADAPDKNDTIPFFYQPEFDLPLVAGCAGWLVCKVMPYPDIQ
EECHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHEEEEEECCCCCCH
QQHNLFMGDIVAAWSDDRVFRNGHWIFDDAPDELRTVHYVAGGQFYAIGKGSKFEHGPGQ
HHCCCEEEHEEEECCCCEEEECCCEEECCCCHHHEEEEEEECCEEEEECCCCCCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]