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The map label for this gene is yoaB [C]

Identifier: 238895228

GI number: 238895228

Start: 3110595

End: 3110963

Strand: Direct

Name: yoaB [C]

Synonym: KP1_3277

Alternate gene names: 238895228

Gene position: 3110595-3110963 (Clockwise)

Preceding gene: 238895227

Following gene: 238895239

Centisome position: 59.27

GC content: 54.74

Gene sequence:

>369_bases
ATGGAAACAAACCGCATGACAATTATTCGCAATAATCCACAACCTCGTCTTGCCGCCAGCGTTGCGTATGGCGATCTGCT
GTTCCTCTCCGGACAGACGCCAAAAAGCAATGAAGACGATATCGTTTTACAAACCCGTGAAGTACTGGAGAAGATCGACG
CGCTGCTGGCCGCAGCCGGGAGCGATAAGCAGCACATTCTCTCCGCGCAGATCTGGTTGAAAAATATCGAGCGTGACTTT
GCCGCATTCAATGAGGTGTGGGTGCAATGGATGCCGGAAGGCTATAGCCCGGCGCGAGCGGCCGTGCAGGCGGAGATGGC
GCGACCAGAAATCCTGGTGGAGATCATGCTCACCGCCGTCAAAGCGTAA

Upstream 100 bases:

>100_bases
GCCAGGGTAGCCTCGGCTTTACTCTCGCCGCCGGCAGCGCGGTGGTGCTGGGCGCGTTAATCGATAATCAGATGCCAGAC
ATTTCTTTAGAAGGTCTCAC

Downstream 100 bases:

>100_bases
AGATTGACAGAAAAGAAAAAGGCCGCAATGCGGCCTTTTTAATTAGTTCAGATTATTTGTCTTTCGGCGACGCGTTTTCG
ACACGGCTTTTCAGCTTCTG

Product: putative translation initiation inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
METNRMTIIRNNPQPRLAASVAYGDLLFLSGQTPKSNEDDIVLQTREVLEKIDALLAAAGSDKQHILSAQIWLKNIERDF
AAFNEVWVQWMPEGYSPARAAVQAEMARPEILVEIMLTAVKA

Sequences:

>Translated_122_residues
METNRMTIIRNNPQPRLAASVAYGDLLFLSGQTPKSNEDDIVLQTREVLEKIDALLAAAGSDKQHILSAQIWLKNIERDF
AAFNEVWVQWMPEGYSPARAAVQAEMARPEILVEIMLTAVKA
>Mature_122_residues
METNRMTIIRNNPQPRLAASVAYGDLLFLSGQTPKSNEDDIVLQTREVLEKIDALLAAAGSDKQHILSAQIWLKNIERDF
AAFNEVWVQWMPEGYSPARAAVQAEMARPEILVEIMLTAVKA

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=37.719298245614, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13652; Mature: 13652

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METNRMTIIRNNPQPRLAASVAYGDLLFLSGQTPKSNEDDIVLQTREVLEKIDALLAAAG
CCCCCEEEEECCCCCCHHHHEECCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHCC
SDKQHILSAQIWLKNIERDFAAFNEVWVQWMPEGYSPARAAVQAEMARPEILVEIMLTAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
KA
CC
>Mature Secondary Structure
METNRMTIIRNNPQPRLAASVAYGDLLFLSGQTPKSNEDDIVLQTREVLEKIDALLAAAG
CCCCCEEEEECCCCCCHHHHEECCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHCC
SDKQHILSAQIWLKNIERDFAAFNEVWVQWMPEGYSPARAAVQAEMARPEILVEIMLTAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
KA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]