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The map label for this gene is rbsB [C]

Identifier: 238893521

GI number: 238893521

Start: 1367675

End: 1368709

Strand: Direct

Name: rbsB [C]

Synonym: KP1_1421

Alternate gene names: 238893521

Gene position: 1367675-1368709 (Clockwise)

Preceding gene: 238893519

Following gene: 238893522

Centisome position: 26.06

GC content: 65.51

Gene sequence:

>1035_bases
ATGAAGAGAGGGGCGATGAAAAACATTTCACTGGCGATGCTGGCCAGACAGATTGGCGTCGGCGTGGCCACCGTTGACCG
GGTGCTGAACGAGCGCGGCGGCGTATCGCCGCAGACCACGCGCAAAGTGCTGCAGGCGGCGCGCGAGGCGGGGCTGAAGC
GGATCCTGCCGGAGGAGCACCGCTTTCCCTGGCAGATTGAGGTCTTTCTCAGCAGCAATGACTCGTTCTTCTTTCCGCAG
CTGGCGCAGGATTTTGCCGCCGTGGCGGATAGCCTCGGCTATCGCCGTCTGACCTTGCACCGCACCTTTGTCCCGGAGTC
GCAGCCGACGACGCTGGCCCGGCGCATTGCGCGCAGTTGCCAGCAGCGTCAGGGGATCATCGTCTTCGGCAATGACCATC
CCGCGGTGCACGACGCGCTGCGCCGTTGCCGGGAGGCTGGCGTCCCGGCGATCACCCTGGCGACGGACCTGCCCGGCGCC
GACCGACTCTGCCACGTGGGGATCAATCAGCTGCAGGCTGGCCGCACGGCGGGGTTAATGCTGGGGAGAATGACGCCGCG
GCCCGGCGAGGTGCTGATGGTCAGCGGCCGGCAAGATTACAGCGCGCATCGCCTGCGCATTCAGGGGTTCCGCGAGGTGC
TGAGCCAGCGCTTTCCCCACCTGCAGCTCAGCGACGTGCTGGCGGGCGAGGAGCGGCGGGAGCAGATCACCCGCCTGGTG
GAGCAAGCCCTGTGCCGCAGCCGGAATATTGTTGGGATCTATAACACCGGGCTTGGCAATACCCAGATTGCCGAGGCGCT
GGCCCGCCACCGCCGCGAAGGCGACGTCTGCTGGATCACCCATGAGCGTTACAACACCACCCGGCAGCAGCTGGCGAAGG
GCAGCCTGGCGTTAACGCTCGATCAGAACACCCGCCAGCACGCCCAGCTGGCGATCGACCTGATGCTGCGCCATCTGGAG
TCCGGCTACCAGCCGCAAACCTATGCCGACGGTAAAGTCGACTTTATCCTCTACAGCGCCGAGAACGTGGACTAA

Upstream 100 bases:

>100_bases
CGTTTGCAGATCATTTTTTTCTCCAGAATGGCGAGGGGACGCTGCCACCATAATCGGTTTGCTAAACTCACTGACACTGC
CGTTTTGATGGATTTCCATC

Downstream 100 bases:

>100_bases
GGCGTACGGCGCCTCCCTTCCTGACAACACGGATTTCCCCGGCGGGTAAATGCCAACCCCGCCGGGAGGGATCGTTTCAA
AGCGTTGTCTGCTTCTCATT

Product: hypothetical protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: LacI Family Transcription Regulator; Regulatory Protein LacI; LacI Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Protein LacI Family; LacI Family Regulatory Protein; Regulatory Protein LacI Family; LacI Regulatory Protein; Transcriptional Regulator LacI Family Protein; Transcription Regulator Protein; HTH-Type Transcriptional Repressor PurR; Sugar ABC Transporter; Ribose ABC Transporter; Transcriptional Regulator Protein Laci-Family; ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein; Regulatory Protein; LacI Family Regulatory; HTH-Type Transcriptional Repressor Purr; Laci-Family Transcription Regulator; Transcriptional Regulatory Protein LacI Family; Transcription Regulator

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MKRGAMKNISLAMLARQIGVGVATVDRVLNERGGVSPQTTRKVLQAAREAGLKRILPEEHRFPWQIEVFLSSNDSFFFPQ
LAQDFAAVADSLGYRRLTLHRTFVPESQPTTLARRIARSCQQRQGIIVFGNDHPAVHDALRRCREAGVPAITLATDLPGA
DRLCHVGINQLQAGRTAGLMLGRMTPRPGEVLMVSGRQDYSAHRLRIQGFREVLSQRFPHLQLSDVLAGEERREQITRLV
EQALCRSRNIVGIYNTGLGNTQIAEALARHRREGDVCWITHERYNTTRQQLAKGSLALTLDQNTRQHAQLAIDLMLRHLE
SGYQPQTYADGKVDFILYSAENVD

Sequences:

>Translated_344_residues
MKRGAMKNISLAMLARQIGVGVATVDRVLNERGGVSPQTTRKVLQAAREAGLKRILPEEHRFPWQIEVFLSSNDSFFFPQ
LAQDFAAVADSLGYRRLTLHRTFVPESQPTTLARRIARSCQQRQGIIVFGNDHPAVHDALRRCREAGVPAITLATDLPGA
DRLCHVGINQLQAGRTAGLMLGRMTPRPGEVLMVSGRQDYSAHRLRIQGFREVLSQRFPHLQLSDVLAGEERREQITRLV
EQALCRSRNIVGIYNTGLGNTQIAEALARHRREGDVCWITHERYNTTRQQLAKGSLALTLDQNTRQHAQLAIDLMLRHLE
SGYQPQTYADGKVDFILYSAENVD
>Mature_344_residues
MKRGAMKNISLAMLARQIGVGVATVDRVLNERGGVSPQTTRKVLQAAREAGLKRILPEEHRFPWQIEVFLSSNDSFFFPQ
LAQDFAAVADSLGYRRLTLHRTFVPESQPTTLARRIARSCQQRQGIIVFGNDHPAVHDALRRCREAGVPAITLATDLPGA
DRLCHVGINQLQAGRTAGLMLGRMTPRPGEVLMVSGRQDYSAHRLRIQGFREVLSQRFPHLQLSDVLAGEERREQITRLV
EQALCRSRNIVGIYNTGLGNTQIAEALARHRREGDVCWITHERYNTTRQQLAKGSLALTLDQNTRQHAQLAIDLMLRHLE
SGYQPQTYADGKVDFILYSAENVD

Specific function: Involved In The High-Affinity D-Ribose Membrane Transport System And Also Serves As The Primary Chemoreceptor For Chemotaxis. [C]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38619; Mature: 38619

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGAMKNISLAMLARQIGVGVATVDRVLNERGGVSPQTTRKVLQAAREAGLKRILPEEH
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
RFPWQIEVFLSSNDSFFFPQLAQDFAAVADSLGYRRLTLHRTFVPESQPTTLARRIARSC
CCCEEEEEEEECCCCEECHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHH
QQRQGIIVFGNDHPAVHDALRRCREAGVPAITLATDLPGADRLCHVGINQLQAGRTAGLM
HHCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCHHHHHCCCHHHHH
LGRMTPRPGEVLMVSGRQDYSAHRLRIQGFREVLSQRFPHLQLSDVLAGEERREQITRLV
EECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHH
EQALCRSRNIVGIYNTGLGNTQIAEALARHRREGDVCWITHERYNTTRQQLAKGSLALTL
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCEEEEE
DQNTRQHAQLAIDLMLRHLESGYQPQTYADGKVDFILYSAENVD
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MKRGAMKNISLAMLARQIGVGVATVDRVLNERGGVSPQTTRKVLQAAREAGLKRILPEEH
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
RFPWQIEVFLSSNDSFFFPQLAQDFAAVADSLGYRRLTLHRTFVPESQPTTLARRIARSC
CCCEEEEEEEECCCCEECHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHH
QQRQGIIVFGNDHPAVHDALRRCREAGVPAITLATDLPGADRLCHVGINQLQAGRTAGLM
HHCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCHHHHHCCCHHHHH
LGRMTPRPGEVLMVSGRQDYSAHRLRIQGFREVLSQRFPHLQLSDVLAGEERREQITRLV
EECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHH
EQALCRSRNIVGIYNTGLGNTQIAEALARHRREGDVCWITHERYNTTRQQLAKGSLALTL
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCEEEEE
DQNTRQHAQLAIDLMLRHLESGYQPQTYADGKVDFILYSAENVD
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA