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The map label for this gene is ycjS [C]

Identifier: 238893518

GI number: 238893518

Start: 1363847

End: 1365019

Strand: Direct

Name: ycjS [C]

Synonym: KP1_1418

Alternate gene names: 238893518

Gene position: 1363847-1365019 (Clockwise)

Preceding gene: 238893517

Following gene: 238893519

Centisome position: 25.99

GC content: 61.98

Gene sequence:

>1173_bases
ATGAGCGCGCGGTTAAATATCGGCCTTATCGGCTCAGGTTTTATGGGGCAGGCACACGCCGACGCTTACCGTCGCGCGGC
GATGTTCTATCCCGATCTGCCCAAGCGCCCGCATCTCTACGCGCTGGCGGATCAGGATCAGGCGATGGCCGAACGCCACG
CGGCGAAACTGGGGGCGGAAAAGGCCTACGGCGACTGGCGCGAGCTGGTAATCGATCCGCAGGTTGATGTGGTGGATATC
ACCTCGCCGAACCATCTGCACTACACAATGGCGATGGCGGCGATCGCGGCGGGTAAACATGTCTATTGCGAGAAGCCGCT
GGCGGTCAATGAGCAGCAGGCGCAGGAGATGGCGCAGGCGGCACGGCGCGCGGGGGTGAAGACCATGGTGGCCTTTAACA
ACATCAAAACGCCGGCGGCGCTGCTGGCAAAGCAGATTATCGCCCGGGGAGATATTGGCGAACCGGTGCGCTTTCGCGGC
ACCTTTGATCAGGGGTTTTATAACGACCCGAACCTGCCCTGGTCCTGGCGCTGCTCGAAAACCCTCGGCGGCAGCGGGGC
GCTTGGCGACCTCGGCGCCCATACCCTGTCCGTCGCCCAGTTTTTGCTGGGCGGGATCCGTGAAGTGACCGCCAGCGCGC
AAACCTGCCTGCGCCAGCGTCCGGTGCCGCAAACCGATGCCGGGTATGCCAGCCGGGTCGCGGCCGATGCCGAGTGGCGG
GAAGTGGAAAATGACGATCAGGTTCAGTGCCTGGTCAATTTCGACAGCGGCGCGGCGGGAGTGATTGAGGCCTCGCGCAT
CGCCGCCGGGCGGATCTTCGGCGTGTTCTGGGAGGTTTCCGGCACCGAAGGCACGCTGTATATGGACGGGGAGCGCTTTA
ACGAGCTGCAGGTCTATCGCTTCAACGATGACAAACATGACCGCGGCTTTAAGACGCTGTATGCCGGGAGCCAGATCCCG
GCCTATGCCGGCTTCTTCGGCTTCGATTTTGGCGGCGGCGGGCTGGGCTATTTTGACGTCAAGGTGATCGAAGTGCATGA
CCTGGTGCAGGGGATTTGCGGGGAGGGCGACTGCTATCCCAACTTTGAATTTGGTTTGCAGAATCAGCGCGTGCTGTCGG
CGATTGAAGCCTCGATGGCCAGCCGTCGCTGGGTGAACGTGGTTAAAGACTAA

Upstream 100 bases:

>100_bases
AGGATCCGGCGATGGCGCCGCCGCTGGCCACCGCCAGCCGCGCCTATGCCTGGCTGGCGCACCATTTATCTTCCCCTTCA
TCGTCAGAGGAGTACGCATC

Downstream 100 bases:

>100_bases
GGAGCCGCTATGTTTCCGTCACACTTACCAACCCCGCGCCGCCCGGCGGCGCAGAGCATTCCCCTCCTGCGCTGGGGCAT
TATCGGTCCTGGCTGGATCG

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVIDPQVDVVDI
TSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQIIARGDIGEPVRFRG
TFDQGFYNDPNLPWSWRCSKTLGGSGALGDLGAHTLSVAQFLLGGIREVTASAQTCLRQRPVPQTDAGYASRVAADAEWR
EVENDDQVQCLVNFDSGAAGVIEASRIAAGRIFGVFWEVSGTEGTLYMDGERFNELQVYRFNDDKHDRGFKTLYAGSQIP
AYAGFFGFDFGGGGLGYFDVKVIEVHDLVQGICGEGDCYPNFEFGLQNQRVLSAIEASMASRRWVNVVKD

Sequences:

>Translated_390_residues
MSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVIDPQVDVVDI
TSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQIIARGDIGEPVRFRG
TFDQGFYNDPNLPWSWRCSKTLGGSGALGDLGAHTLSVAQFLLGGIREVTASAQTCLRQRPVPQTDAGYASRVAADAEWR
EVENDDQVQCLVNFDSGAAGVIEASRIAAGRIFGVFWEVSGTEGTLYMDGERFNELQVYRFNDDKHDRGFKTLYAGSQIP
AYAGFFGFDFGGGGLGYFDVKVIEVHDLVQGICGEGDCYPNFEFGLQNQRVLSAIEASMASRRWVNVVKD
>Mature_389_residues
SARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVIDPQVDVVDIT
SPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQIIARGDIGEPVRFRGT
FDQGFYNDPNLPWSWRCSKTLGGSGALGDLGAHTLSVAQFLLGGIREVTASAQTCLRQRPVPQTDAGYASRVAADAEWRE
VENDDQVQCLVNFDSGAAGVIEASRIAAGRIFGVFWEVSGTEGTLYMDGERFNELQVYRFNDDKHDRGFKTLYAGSQIPA
YAGFFGFDFGGGGLGYFDVKVIEVHDLVQGICGEGDCYPNFEFGLQNQRVLSAIEASMASRRWVNVVKD

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=202, Percent_Identity=29.7029702970297, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI1787574, Length=215, Percent_Identity=29.3023255813954, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87081947, Length=208, Percent_Identity=29.8076923076923, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6323975, Length=289, Percent_Identity=28.719723183391, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24581117, Length=170, Percent_Identity=34.1176470588235, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42692; Mature: 42560

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAE
CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCH
KAYGDWRELVIDPQVDVVDITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQA
HHCCCHHHEEECCCCCEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH
ARRAGVKTMVAFNNIKTPAALLAKQIIARGDIGEPVRFRGTFDQGFYNDPNLPWSWRCSK
HHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEECC
TLGGSGALGDLGAHTLSVAQFLLGGIREVTASAQTCLRQRPVPQTDAGYASRVAADAEWR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHH
EVENDDQVQCLVNFDSGAAGVIEASRIAAGRIFGVFWEVSGTEGTLYMDGERFNELQVYR
HCCCCCCEEEEEEECCCCCCCEEHHHHHHCEEEEEEEEEECCCCEEEECCCCCCEEEEEE
FNDDKHDRGFKTLYAGSQIPAYAGFFGFDFGGGGLGYFDVKVIEVHDLVQGICGEGDCYP
ECCCCCCCCCEEEECCCCCCCHHCEEEECCCCCCCCEEEEEEEEHHHHHHHHCCCCCCCC
NFEFGLQNQRVLSAIEASMASRRWVNVVKD
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAE
CCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCH
KAYGDWRELVIDPQVDVVDITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQA
HHCCCHHHEEECCCCCEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH
ARRAGVKTMVAFNNIKTPAALLAKQIIARGDIGEPVRFRGTFDQGFYNDPNLPWSWRCSK
HHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEECC
TLGGSGALGDLGAHTLSVAQFLLGGIREVTASAQTCLRQRPVPQTDAGYASRVAADAEWR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHH
EVENDDQVQCLVNFDSGAAGVIEASRIAAGRIFGVFWEVSGTEGTLYMDGERFNELQVYR
HCCCCCCEEEEEEECCCCCCCEEHHHHHHCEEEEEEEEEECCCCEEEECCCCCCEEEEEE
FNDDKHDRGFKTLYAGSQIPAYAGFFGFDFGGGGLGYFDVKVIEVHDLVQGICGEGDCYP
ECCCCCCCCCEEEECCCCCCCHHCEEEECCCCCCCCEEEEEEEEHHHHHHHHCCCCCCCC
NFEFGLQNQRVLSAIEASMASRRWVNVVKD
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]