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The map label for this gene is fimB [H]

Identifier: 238893504

GI number: 238893504

Start: 1345704

End: 1346516

Strand: Direct

Name: fimB [H]

Synonym: KP1_1402

Alternate gene names: 238893504

Gene position: 1345704-1346516 (Clockwise)

Preceding gene: 238893503

Following gene: 238893505

Centisome position: 25.64

GC content: 57.81

Gene sequence:

>813_bases
ATGCCGCCAAGGCTGGAAAAGTCGCAGCCTACGTCAACTTTACGGTGGTCTATCCGTAACCCCTGTCCACGGCCCCGCTC
AGGGGCCGTTTATCCCCCCGACAAGGAGGAGGTGAATATGCGGCGTATGGTTCTGGCACTGCTGCTGTCCAGCTATTTAC
CCTCGGCGGACGCCAGCATGGTTATTGACGGCACACGGATTATTTTTCCCGGCGACAAAAAAGAGATCGCCGTCCGGGCC
ACCAATATGGGGGAGACCCCCTCTCTGACGCAGGTCTGGGTCGACGATGGCCGCGTGCAAAATCAACCGGAAAAGGATGC
GGCGCCGTTTATTGTGCTGCCGCCGATTGTGCGCATCGAACCGGGAAAAGGCCAGAGCTGGCGCCTGGTGTTTAACGGCA
GCCGCCTGCCGCAGGATCGGGAATCGCTGTTCTGGTTCAATCTTCTGGATATCCCACCTGAGCCGAAAAATGGCAAGACT
GACAATTACCTGCAGCTCGCGATACGGTCGCGTATCAAGCTGTTTTACCGTCCGGCAGGCGTGGCGGCGGAAAAAATAGC
CGCGGAAAAAGCCCTGAGCTGGGCGCTGGCTCCTACGGGCAACGGGTTGCGGGTGAGCAATGCCTCAGCGCGCTATATCA
CCATCGACAGCATCACCCTTAACGGACAAAAACACGCTGTCGGCATGGTCGCCCCGTTTTCCTCGCTGGAGATCGCGCCT
AAAGGGGTCGCGCTGCGCACGCTGCCAGCCAAATTCAGCTTCACCACCATCAATGATTACGGCGCGGTAGTGAATCATAA
TTATCCTCAGTAA

Upstream 100 bases:

>100_bases
GCAGACGGCAAAGTTGCTCGCCTGGAAGCGATCCCGGTGGCGGTGGCTGAGCAGGATGGTTCCGCCTCGCTGCCTTTCTA
TGCCCGCTACTATGCGACTG

Downstream 100 bases:

>100_bases
GGACATTATTATGAAACTCAGGGAGATCAAGGTTGGGTTGATGCTGCTCCTTCCCTGGCAGGAGGCATGGGCGGCAGAGG
CGTTTAGTTTTAACCGCGCC

Product: putative pilin chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MPPRLEKSQPTSTLRWSIRNPCPRPRSGAVYPPDKEEVNMRRMVLALLLSSYLPSADASMVIDGTRIIFPGDKKEIAVRA
TNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRIEPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKT
DNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAPTGNGLRVSNASARYITIDSITLNGQKHAVGMVAPFSSLEIAP
KGVALRTLPAKFSFTTINDYGAVVNHNYPQ

Sequences:

>Translated_270_residues
MPPRLEKSQPTSTLRWSIRNPCPRPRSGAVYPPDKEEVNMRRMVLALLLSSYLPSADASMVIDGTRIIFPGDKKEIAVRA
TNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRIEPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKT
DNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAPTGNGLRVSNASARYITIDSITLNGQKHAVGMVAPFSSLEIAP
KGVALRTLPAKFSFTTINDYGAVVNHNYPQ
>Mature_269_residues
PPRLEKSQPTSTLRWSIRNPCPRPRSGAVYPPDKEEVNMRRMVLALLLSSYLPSADASMVIDGTRIIFPGDKKEIAVRAT
NMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRIEPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKTD
NYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAPTGNGLRVSNASARYITIDSITLNGQKHAVGMVAPFSSLEIAPK
GVALRTLPAKFSFTTINDYGAVVNHNYPQ

Specific function: Required for the biogenesis of the filamentous hemagglutinin and the fimbria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1786333, Length=226, Percent_Identity=38.9380530973451, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1788428, Length=229, Percent_Identity=37.117903930131, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1786936, Length=227, Percent_Identity=35.2422907488987, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1786743, Length=229, Percent_Identity=32.3144104803493, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1789532, Length=228, Percent_Identity=34.2105263157895, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1790771, Length=227, Percent_Identity=33.0396475770925, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87082203, Length=236, Percent_Identity=29.2372881355932, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788677, Length=208, Percent_Identity=32.2115384615385, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1787171, Length=230, Percent_Identity=27.8260869565217, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87081806, Length=232, Percent_Identity=30.1724137931034, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 29875; Mature: 29744

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRLEKSQPTSTLRWSIRNPCPRPRSGAVYPPDKEEVNMRRMVLALLLSSYLPSADASM
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
VIDGTRIIFPGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRIE
EEECEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCEEEEE
PGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKTDNYLQLAIRSRIKLFYRPAG
CCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHEEEEECCCC
VAAEKIAAEKALSWALAPTGNGLRVSNASARYITIDSITLNGQKHAVGMVAPFSSLEIAP
HHHHHHHHHHHHEEEECCCCCCEEEECCCEEEEEEEEEEECCCCCEEEEEECCCCCEECC
KGVALRTLPAKFSFTTINDYGAVVNHNYPQ
CCEEEEEECCEEEEEEECCCCCEECCCCCC
>Mature Secondary Structure 
PPRLEKSQPTSTLRWSIRNPCPRPRSGAVYPPDKEEVNMRRMVLALLLSSYLPSADASM
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
VIDGTRIIFPGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRIE
EEECEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCEEEEE
PGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKTDNYLQLAIRSRIKLFYRPAG
CCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHEEEEECCCC
VAAEKIAAEKALSWALAPTGNGLRVSNASARYITIDSITLNGQKHAVGMVAPFSSLEIAP
HHHHHHHHHHHHEEEECCCCCCEEEECCCEEEEEEEEEEECCCCCEEEEEECCCCCEECC
KGVALRTLPAKFSFTTINDYGAVVNHNYPQ
CCEEEEEECCEEEEEEECCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1360139; 1354611; 12910271 [H]