Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
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Accession | NC_012731 |
Length | 5,248,520 |
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The map label for this gene is gltA [H]
Identifier: 238893500
GI number: 238893500
Start: 1342429
End: 1343733
Strand: Direct
Name: gltA [H]
Synonym: KP1_1398
Alternate gene names: 238893500
Gene position: 1342429-1343733 (Clockwise)
Preceding gene: 238893499
Following gene: 238893503
Centisome position: 25.58
GC content: 61.38
Gene sequence:
>1305_bases ATGAGCACTACACCGTTAACGCTTTCTTTTGCCGGACAACAACCGCCCATCGCCCTGCCGCAGGTGCCGGGAACGCGGGG GCCGGTGGGAGTCGATATGCGCGGGCTAAATCAGTCCGGATTCTGCAGCTATGACCCCGGCTTCGCCAATACCGCCGGAT GCCAGTCGGCGATCTCGTGGATCGATACGGAAAACAGCGTGCTATTGCACCGCGGCTATCCGGTGGATCAGCTGGCTCGC CAGTGCGATTTTCTCGAAGTGGCCTACATCATGCTGAACGGTGACGCGCCGGATGAGGCCAGCTATCAAACCTTTCGCGA GACCATCACCCGCCATACTCTGGTCCACGAGCAGATAGCCCGCATGTGCAGCGGCTTTCGTCGCGACTCGCACCCGATGG CGCTGATGTGCGCCCTGGTGGGGGCGCTGGCGGCGTTTTATCATGACGTCCTGGACGTGGAAAATCCGCAGCACCGGGCG CTGGCCGCCACCCGGCTGCTGTCGAAAATGCCCACTATCGCCGCCATGAGCTACAAGTACACCATTGAGCAACCCGCAGC ATATCCGCGCAACGATCTCTCCTATGCCGGTAATTTCCTGCAGATGCTGTTTGCTATCCCGGCGGAAAAATACGTTCTCA ATCCGGTTATCGAGCAGGCGATGAACCAGATCCTGGTGCTGCATGCCGATCACGGGCAGTGCGCCTCGACCACTACGGTG CGCGCGGCGGGTTCCTCCGGGGCGAACTTATTCGCCTGCGTCGCCGCCGGGCTGGCGTCACTGTGGGGGCCGATGCATGG AGGAGCAAATGAATCGAGCATGCGAATGCTGGAGGAGATTGAAAGCGTCGATCAGGTTCCGGCGTTTCTGCGCCAGGCGA AGCGCGATCCGCAGGCATTTCGCCGGCTGGGTTTTGGCAACTCGCGCTACCGTCACCGTGACCCGCGCGCCGATATCCTG CGTGAAACCAGCCATCGGGTGCTGGCGGAGGTAGGCATGTCCGACCGCCTGCTGCAGGTGGCGATGGCCCTTGAGGACGT GGCGCTGACCGACCCCTATTTTGTGGACAATGGCCTGTCGCCAAGCGTGGATTTCTATACCGCGGTGATCCTTAAAGCGA TGAATCTGCCTTCGTCGATGTTTGCGGTGGTCACCGCGGTCGGTCGGACGGTCGGTTGGGTGGCGCACTGGAACGAGATG CACCAGGCGCCGCTGACCATCTACCGGCCACGACAGATTTACGTTGGCGAGGGCTATCGGGATTACGTCTCCCGACGCGG CGAGCGGTCTGCTGAGCTAAGGTAA
Upstream 100 bases:
>100_bases GATGACATCAATGAATAAGCTGCATCACATTGGTTATGTTGGTCTTTCCGCCTGAAGAATGACTTCGGGTCGCTGATAAG CTTGCTGGGGGACTAACAGG
Downstream 100 bases:
>100_bases TGCCTTACAGGCAGGAGGCGCGCGGCGTCTTCCTGCCCAGGCGGGTTACTACTCAGAGATGCCGGGAGAGCAGATAGTGC TCGACGGCGGTATATTCGGT
Product: putative citrate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MSTTPLTLSFAGQQPPIALPQVPGTRGPVGVDMRGLNQSGFCSYDPGFANTAGCQSAISWIDTENSVLLHRGYPVDQLAR QCDFLEVAYIMLNGDAPDEASYQTFRETITRHTLVHEQIARMCSGFRRDSHPMALMCALVGALAAFYHDVLDVENPQHRA LAATRLLSKMPTIAAMSYKYTIEQPAAYPRNDLSYAGNFLQMLFAIPAEKYVLNPVIEQAMNQILVLHADHGQCASTTTV RAAGSSGANLFACVAAGLASLWGPMHGGANESSMRMLEEIESVDQVPAFLRQAKRDPQAFRRLGFGNSRYRHRDPRADIL RETSHRVLAEVGMSDRLLQVAMALEDVALTDPYFVDNGLSPSVDFYTAVILKAMNLPSSMFAVVTAVGRTVGWVAHWNEM HQAPLTIYRPRQIYVGEGYRDYVSRRGERSAELR
Sequences:
>Translated_434_residues MSTTPLTLSFAGQQPPIALPQVPGTRGPVGVDMRGLNQSGFCSYDPGFANTAGCQSAISWIDTENSVLLHRGYPVDQLAR QCDFLEVAYIMLNGDAPDEASYQTFRETITRHTLVHEQIARMCSGFRRDSHPMALMCALVGALAAFYHDVLDVENPQHRA LAATRLLSKMPTIAAMSYKYTIEQPAAYPRNDLSYAGNFLQMLFAIPAEKYVLNPVIEQAMNQILVLHADHGQCASTTTV RAAGSSGANLFACVAAGLASLWGPMHGGANESSMRMLEEIESVDQVPAFLRQAKRDPQAFRRLGFGNSRYRHRDPRADIL RETSHRVLAEVGMSDRLLQVAMALEDVALTDPYFVDNGLSPSVDFYTAVILKAMNLPSSMFAVVTAVGRTVGWVAHWNEM HQAPLTIYRPRQIYVGEGYRDYVSRRGERSAELR >Mature_433_residues STTPLTLSFAGQQPPIALPQVPGTRGPVGVDMRGLNQSGFCSYDPGFANTAGCQSAISWIDTENSVLLHRGYPVDQLARQ CDFLEVAYIMLNGDAPDEASYQTFRETITRHTLVHEQIARMCSGFRRDSHPMALMCALVGALAAFYHDVLDVENPQHRAL AATRLLSKMPTIAAMSYKYTIEQPAAYPRNDLSYAGNFLQMLFAIPAEKYVLNPVIEQAMNQILVLHADHGQCASTTTVR AAGSSGANLFACVAAGLASLWGPMHGGANESSMRMLEEIESVDQVPAFLRQAKRDPQAFRRLGFGNSRYRHRDPRADILR ETSHRVLAEVGMSDRLLQVAMALEDVALTDPYFVDNGLSPSVDFYTAVILKAMNLPSSMFAVVTAVGRTVGWVAHWNEMH QAPLTIYRPRQIYVGEGYRDYVSRRGERSAELR
Specific function: Tricarboxylic acid cycle. [C]
COG id: COG0372
COG function: function code C; Citrate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the citrate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786939, Length=424, Percent_Identity=57.7830188679245, Blast_Score=544, Evalue=1e-156, Organism=Escherichia coli, GI1786527, Length=382, Percent_Identity=27.7486910994764, Blast_Score=139, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17555174, Length=398, Percent_Identity=23.1155778894472, Blast_Score=87, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324328, Length=355, Percent_Identity=23.6619718309859, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6319850, Length=358, Percent_Identity=24.8603351955307, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24640124, Length=348, Percent_Identity=25.8620689655172, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI24640126, Length=348, Percent_Identity=25.8620689655172, Blast_Score=83, Evalue=4e-16,
Paralogues:
None
Copy number: 624 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016142 - InterPro: IPR016143 - InterPro: IPR002020 - InterPro: IPR016141 - InterPro: IPR019810 - InterPro: IPR010953 [H]
Pfam domain/function: PF00285 Citrate_synt [H]
EC number: =2.3.3.1 [H]
Molecular weight: Translated: 47937; Mature: 47806
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTPLTLSFAGQQPPIALPQVPGTRGPVGVDMRGLNQSGFCSYDPGFANTAGCQSAISW CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH IDTENSVLLHRGYPVDQLARQCDFLEVAYIMLNGDAPDEASYQTFRETITRHTLVHEQIA HCCCCCEEEECCCCHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH RMCSGFRRDSHPMALMCALVGALAAFYHDVLDVENPQHRALAATRLLSKMPTIAAMSYKY HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHEEEEE TIEQPAAYPRNDLSYAGNFLQMLFAIPAEKYVLNPVIEQAMNQILVLHADHGQCASTTTV EECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEE RAAGSSGANLFACVAAGLASLWGPMHGGANESSMRMLEEIESVDQVPAFLRQAKRDPQAF EECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RRLGFGNSRYRHRDPRADILRETSHRVLAEVGMSDRLLQVAMALEDVALTDPYFVDNGLS HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECCCCC PSVDFYTAVILKAMNLPSSMFAVVTAVGRTVGWVAHWNEMHQAPLTIYRPRQIYVGEGYR CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCHH DYVSRRGERSAELR HHHHCCCCCCCCCC >Mature Secondary Structure STTPLTLSFAGQQPPIALPQVPGTRGPVGVDMRGLNQSGFCSYDPGFANTAGCQSAISW CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH IDTENSVLLHRGYPVDQLARQCDFLEVAYIMLNGDAPDEASYQTFRETITRHTLVHEQIA HCCCCCEEEECCCCHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH RMCSGFRRDSHPMALMCALVGALAAFYHDVLDVENPQHRALAATRLLSKMPTIAAMSYKY HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHEEEEE TIEQPAAYPRNDLSYAGNFLQMLFAIPAEKYVLNPVIEQAMNQILVLHADHGQCASTTTV EECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEE RAAGSSGANLFACVAAGLASLWGPMHGGANESSMRMLEEIESVDQVPAFLRQAKRDPQAF EECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RRLGFGNSRYRHRDPRADILRETSHRVLAEVGMSDRLLQVAMALEDVALTDPYFVDNGLS HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECCCCC PSVDFYTAVILKAMNLPSSMFAVVTAVGRTVGWVAHWNEMHQAPLTIYRPRQIYVGEGYR CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCHH DYVSRRGERSAELR HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]