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The map label for this gene is ylbF [H]

Identifier: 238893481

GI number: 238893481

Start: 1329895

End: 1330698

Strand: Direct

Name: ylbF [H]

Synonym: KP1_1377

Alternate gene names: 238893481

Gene position: 1329895-1330698 (Clockwise)

Preceding gene: 238893480

Following gene: 238893482

Centisome position: 25.34

GC content: 60.32

Gene sequence:

>804_bases
ATGGATAAGATCCGTCCGCTGACAGGCAGCATTGACGCGCCGGACCATCGCCAGCCGTGGCGAACCGGCGGCCTCTGGCA
GCGCACCATCAATCTCTATGTTGCAGGCGGCGCGATGCTGACGCTGCATCATCGGGGACAAGGCGTGAGCCCCGGCGGAT
GGGTATTACGTCACCGTGATTTTATCCGTTTACACGCGGCGCTGAAGGCGGGGGGGTTGCCGATAGCGCGTGATGACGGC
ATTCAGGTCGATAACCTTTTGCTGTTACCGCCACGCAGGCGCTGCTCCCTGCGGCCTCGATATCAGCCTGATGGCCCTTA
TCTGCCGGCAGCGCTCATGAAGCGCCCGGAAGAGACGGGCCTGTTTGGGCCGCTGTGGCAGGCTATCCATCTGCCGCATC
ATCCTGAGTTGCGGCAATTACGCCACTGTTTTGCTTCTGCGTTGACCGGGAGCCCCGTTGACTGGCGGCTGTGGTTGGGG
AAGGGGCCAGGCCTGACGCCGAGCATGGACGATATGCTGATCGGCATGATGCTGTCCGCGTGGTGTTCTGGACAGATGTC
GCGCAACAGCGGACACCATTTCTTTCATGCCTCCGGCGATCTGCATGCTGCCACAACGCAGGTCAGCGTCAACTATTTAC
GCTACGCCAGTAAGGGATGCTTCGCTTCACCGCTACTGCATGTTGTTAACGCGCTTCAGTGCGGACGACGAATTGAACCT
GCCGTCGAAGCCCTGCTGGCGATGGGGCACACCTCTGGTGCCGACACGCTTCTGGGGTTCTGGCTGGCGCAACAAATAAT
GTAA

Upstream 100 bases:

>100_bases
TCGGCCAGATTGGCGCCGGAACCGTCAGAGCCCCACTGGCCTGCTTTGAACTGGCGCTGGAAGCGCTGGCGGACGAGTTG
GGCGTGAGCTGAGGCACGCA

Downstream 100 bases:

>100_bases
GGACTTTTATGAAAACGCTGGTTGTTGCCCTCGGGGGTAACGCTTTATTACAGCGCGGAGAAGCGCTGACGGTAGAAAAT
CAGTATCGCAATATTCACAG

Product: putative cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MDKIRPLTGSIDAPDHRQPWRTGGLWQRTINLYVAGGAMLTLHHRGQGVSPGGWVLRHRDFIRLHAALKAGGLPIARDDG
IQVDNLLLLPPRRRCSLRPRYQPDGPYLPAALMKRPEETGLFGPLWQAIHLPHHPELRQLRHCFASALTGSPVDWRLWLG
KGPGLTPSMDDMLIGMMLSAWCSGQMSRNSGHHFFHASGDLHAATTQVSVNYLRYASKGCFASPLLHVVNALQCGRRIEP
AVEALLAMGHTSGADTLLGFWLAQQIM

Sequences:

>Translated_267_residues
MDKIRPLTGSIDAPDHRQPWRTGGLWQRTINLYVAGGAMLTLHHRGQGVSPGGWVLRHRDFIRLHAALKAGGLPIARDDG
IQVDNLLLLPPRRRCSLRPRYQPDGPYLPAALMKRPEETGLFGPLWQAIHLPHHPELRQLRHCFASALTGSPVDWRLWLG
KGPGLTPSMDDMLIGMMLSAWCSGQMSRNSGHHFFHASGDLHAATTQVSVNYLRYASKGCFASPLLHVVNALQCGRRIEP
AVEALLAMGHTSGADTLLGFWLAQQIM
>Mature_267_residues
MDKIRPLTGSIDAPDHRQPWRTGGLWQRTINLYVAGGAMLTLHHRGQGVSPGGWVLRHRDFIRLHAALKAGGLPIARDDG
IQVDNLLLLPPRRRCSLRPRYQPDGPYLPAALMKRPEETGLFGPLWQAIHLPHHPELRQLRHCFASALTGSPVDWRLWLG
KGPGLTPSMDDMLIGMMLSAWCSGQMSRNSGHHFFHASGDLHAATTQVSVNYLRYASKGCFASPLLHVVNALQCGRRIEP
AVEALLAMGHTSGADTLLGFWLAQQIM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786731, Length=267, Percent_Identity=52.8089887640449, Blast_Score=264, Evalue=4e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021530 [H]

Pfam domain/function: PF11392 DUF2877 [H]

EC number: NA

Molecular weight: Translated: 29540; Mature: 29540

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIRPLTGSIDAPDHRQPWRTGGLWQRTINLYVAGGAMLTLHHRGQGVSPGGWVLRHRD
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEEECCCCCCCCCEEEEHHH
FIRLHAALKAGGLPIARDDGIQVDNLLLLPPRRRCSLRPRYQPDGPYLPAALMKRPEETG
HHHHHHHHHHCCCCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCHHCC
LFGPLWQAIHLPHHPELRQLRHCFASALTGSPVDWRLWLGKGPGLTPSMDDMLIGMMLSA
CCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
WCSGQMSRNSGHHFFHASGDLHAATTQVSVNYLRYASKGCFASPLLHVVNALQCGRRIEP
HHCCCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCH
AVEALLAMGHTSGADTLLGFWLAQQIM
HHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDKIRPLTGSIDAPDHRQPWRTGGLWQRTINLYVAGGAMLTLHHRGQGVSPGGWVLRHRD
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEEECCCCCCCCCEEEEHHH
FIRLHAALKAGGLPIARDDGIQVDNLLLLPPRRRCSLRPRYQPDGPYLPAALMKRPEETG
HHHHHHHHHHCCCCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCHHCC
LFGPLWQAIHLPHHPELRQLRHCFASALTGSPVDWRLWLGKGPGLTPSMDDMLIGMMLSA
CCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
WCSGQMSRNSGHHFFHASGDLHAATTQVSVNYLRYASKGCFASPLLHVVNALQCGRRIEP
HHCCCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCH
AVEALLAMGHTSGADTLLGFWLAQQIM
HHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]