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The map label for this gene is yobV [H]

Identifier: 238893347

GI number: 238893347

Start: 1188451

End: 1189146

Strand: Direct

Name: yobV [H]

Synonym: KP1_1228

Alternate gene names: 238893347

Gene position: 1188451-1189146 (Clockwise)

Preceding gene: 238893346

Following gene: 238893350

Centisome position: 22.64

GC content: 62.21

Gene sequence:

>696_bases
ATGACCCGACGCGCCGACCGTTTATTTCAGATTGTGCAGATCCTGCGCGGCAGGCGGCTCACTACCGCCGCGCTGCTGGC
GGAGCGGCTGGGCGTGTCGGAGCGTACCGTCTATCGCGATATTCGCGATCTCTCCCTCTCCGGCGTACCGGTGGAGGGCG
AAGCGGGCAGCGGCTACCGGCTGCTGGCGGGCTACGATCTGCCGCCGCTGATGCTGACCACCAAAGAGTCCGAGGCGCTG
ATCGCAGCGATTCGGCTGCTAAAAACCTGGGGCGGTGAGGCGCTGTCGCAGTCGCTGGAGTCCGCCCAGGAAAAAATGCT
GGCGATCCTGCCGGAGGCGCGTCGGCGCCAGGCGGAGCAGACTCGCCTGTTTGCCCCTGACCTTGGCGCGCATCGCTATG
CTAAAACCCATTTTGACGTTATCCACCAGGCCGTATCCAATCAGCAGGTATTACAGCTTCACTACCAGGATGAATCCGGT
CAGGTGACGTGGCGTGAAGTGCTGCCGCTGGGGCTGTTTTTCTGGGGGGAGCGCTGGCTGCTGGTGGCCTGGTGCGAGCT
GCGCAATGATTACCGCAATTTTCGCCTCGACCGTTGTCTGGAGGTCAGAAGGACCGAACGTCGATTCAGCGAGTGCGCAG
ACCGCTCGTTAAGCGATTTTCTGCGCAAGGTCCGGTGCGAGGTGCGGGAGAAATAA

Upstream 100 bases:

>100_bases
TGCCGAATGATATTGGCACCATCGCCCTGTTTACCGACAGCGAGGGCAACCGCGTCGGCCTGCACCAGCCGGCTTAACCT
TAACTTTTGTGAAGTGAGAC

Downstream 100 bases:

>100_bases
AAAAGCCCGGGCAGCAGGAGCTGCGGCCCGGGCGCTGTCTTGCTGTATCAGCAATCAGAAGTTGTAGCCGACCACGAAGT
AACCACCCCAGCCGGTCGAG

Product: putative DeoR-family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTRRADRLFQIVQILRGRRLTTAALLAERLGVSERTVYRDIRDLSLSGVPVEGEAGSGYRLLAGYDLPPLMLTTKESEAL
IAAIRLLKTWGGEALSQSLESAQEKMLAILPEARRRQAEQTRLFAPDLGAHRYAKTHFDVIHQAVSNQQVLQLHYQDESG
QVTWREVLPLGLFFWGERWLLVAWCELRNDYRNFRLDRCLEVRRTERRFSECADRSLSDFLRKVRCEVREK

Sequences:

>Translated_231_residues
MTRRADRLFQIVQILRGRRLTTAALLAERLGVSERTVYRDIRDLSLSGVPVEGEAGSGYRLLAGYDLPPLMLTTKESEAL
IAAIRLLKTWGGEALSQSLESAQEKMLAILPEARRRQAEQTRLFAPDLGAHRYAKTHFDVIHQAVSNQQVLQLHYQDESG
QVTWREVLPLGLFFWGERWLLVAWCELRNDYRNFRLDRCLEVRRTERRFSECADRSLSDFLRKVRCEVREK
>Mature_230_residues
TRRADRLFQIVQILRGRRLTTAALLAERLGVSERTVYRDIRDLSLSGVPVEGEAGSGYRLLAGYDLPPLMLTTKESEALI
AAIRLLKTWGGEALSQSLESAQEKMLAILPEARRRQAEQTRLFAPDLGAHRYAKTHFDVIHQAVSNQQVLQLHYQDESGQ
VTWREVLPLGLFFWGERWLLVAWCELRNDYRNFRLDRCLEVRRTERRFSECADRSLSDFLRKVRCEVREK

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 26817; Mature: 26686

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRADRLFQIVQILRGRRLTTAALLAERLGVSERTVYRDIRDLSLSGVPVEGEAGSGYR
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEE
LLAGYDLPPLMLTTKESEALIAAIRLLKTWGGEALSQSLESAQEKMLAILPEARRRQAEQ
EEECCCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TRLFAPDLGAHRYAKTHFDVIHQAVSNQQVLQLHYQDESGQVTWREVLPLGLFFWGERWL
HHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHHHHHHHCCHHH
LVAWCELRNDYRNFRLDRCLEVRRTERRFSECADRSLSDFLRKVRCEVREK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRRADRLFQIVQILRGRRLTTAALLAERLGVSERTVYRDIRDLSLSGVPVEGEAGSGYR
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEE
LLAGYDLPPLMLTTKESEALIAAIRLLKTWGGEALSQSLESAQEKMLAILPEARRRQAEQ
EEECCCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TRLFAPDLGAHRYAKTHFDVIHQAVSNQQVLQLHYQDESGQVTWREVLPLGLFFWGERWL
HHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHHHHHHHCCHHH
LVAWCELRNDYRNFRLDRCLEVRRTERRFSECADRSLSDFLRKVRCEVREK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]