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The map label for this gene is yajC [H]

Identifier: 238893343

GI number: 238893343

Start: 1184707

End: 1185069

Strand: Direct

Name: yajC [H]

Synonym: KP1_1223

Alternate gene names: 238893343

Gene position: 1184707-1185069 (Clockwise)

Preceding gene: 238893342

Following gene: 238893344

Centisome position: 22.57

GC content: 49.86

Gene sequence:

>363_bases
TTGATTAATTTTAATAATGAGGGAATTTCAATGAGCTTTTTTATTTCTGATGCGGTAGCGGCAACGGGTGCACCGGCGCA
GGGCAGCCCGATGTCTCTGATTCTGATGCTGGTGGTGTTCGGTCTGATTTTTTACTTCATGATCCTGCGTCCACAGCAGA
AGCGCACCAAGGAACATAAGAACCTGATGAACTCCATCGCCAAAGGTGATGAAGTGCTGACCAACGGCGGTCTGGTCGGT
CGCGTGACCAAAGTAGCGGAAACTGGCTACATTGCTATCGCGCTGAACGATACCACTGAAGTGGTTATCAAACGTGACTT
CGTTGCTGCCGTTCTGCCGAAAGGCACCATGAAGGCGCTGTAA

Upstream 100 bases:

>100_bases
TTAATGGCTGGTTTACGCAAGGCTATCGAAGAGGGTAAATTAGAGAGCTTCGTGACCGATTTTTACCAACGTCAGGGGCG
CACCGTGCCTCCTTTGAACG

Downstream 100 bases:

>100_bases
TCTAACTTTTCCCAAAGGGAACTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTACGTCATGCTGGTCGTCGTCATTGTC
GTCGGCCTGATCTATGCGCT

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MINFNNEGISMSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKNLMNSIAKGDEVLTNGGLVG
RVTKVAETGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL

Sequences:

>Translated_120_residues
MINFNNEGISMSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKNLMNSIAKGDEVLTNGGLVG
RVTKVAETGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL
>Mature_120_residues
MINFNNEGISMSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKNLMNSIAKGDEVLTNGGLVG
RVTKVAETGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=110, Percent_Identity=97.2727272727273, Blast_Score=217, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12980; Mature: 12980

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINFNNEGISMSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHK
CCCCCCCCEEEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
NLMNSIAKGDEVLTNGGLVGRVTKVAETGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL
HHHHHHHCCCCEEECCCCHHHHHHHCCCCEEEEEECCCEEEEEHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MINFNNEGISMSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHK
CCCCCCCCEEEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
NLMNSIAKGDEVLTNGGLVGRVTKVAETGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL
HHHHHHHCCCCEEECCCCHHHHHHHCCCCEEEEEECCCEEEEEHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]