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The map label for this gene is yjjQ [H]

Identifier: 238892951

GI number: 238892951

Start: 759164

End: 759886

Strand: Direct

Name: yjjQ [H]

Synonym: KP1_0777

Alternate gene names: 238892951

Gene position: 759164-759886 (Clockwise)

Preceding gene: 238892950

Following gene: 238892952

Centisome position: 14.46

GC content: 51.31

Gene sequence:

>723_bases
ATGTTACCAGGACAAGGTAAGTTTGGCGTCGTTATTAGTAAAATTCCCGTCATGCAATCAGGGTTAAAGGTGATCTTCAA
TGAGAACCTCCCTGATTACGAACTGAGTTTTTGTCGTTCTCATGATGAGCTCACCCTTTTACAACTGCGGCGGGCGGTGC
TGGTTGTCGCGGATATCTCCGGCGAGATTGCGCACCCCCGAGCCGTCTGCGAGCGTTATTACTCCCTCATGACTCAGTAC
CGTGATATTCACTGGGTTTTTATGGTCAGCGACAGCCTCTATCCGTTGGCCGTTGAGCTATTAATTCGTCCTGAAAGCTC
GTTGATCTCCGAGAGCGAGCCGGTTAACCGGCTGATTGAGGTGATTTGCGCCGGTAGCCGTGCGGCTGAACAGATTAGTC
GTACGCTGTTTGCCGGGGATGAGGACAGCGATTTCGCAAGCTACCACTCTGCGGCGATGCTCACTCTTTCAGAGCGTAAA
GTTCTGCGCCTTCTGGCGAAGGGGTGGGGAATAAACCAGATCGCCGCGCTGTTGAAAAAGAGTAATAAGACGATCAGCGC
GCAGAAAAACAGCGCAATGCGTCGCTTATCGCTACGCAGCAACGCTGAAATGTATGCCTGGATCAACAGCGCGCAGGGAA
TGCAAGAGCTGAATATCAATTCAGCTTACGGGGAGCAAATGGAATGGAAAAAAATAGTACAACCCGCCATGTCGCCATCG
TAG

Upstream 100 bases:

>100_bases
ATATGATTTTAATATTCATCCAGGAAATGATATGGCGATAAAGTCGCTCGCCGATCGTTTGCAGGCAAGCGAAGGAACTT
CGACAGGAAGCGGAGGTGTT

Downstream 100 bases:

>100_bases
AAAAATGCGTGATGACGGAAATGGCATGGCGCTATATCTTTAGTCGTGAAGATAATCGCCGTTATCATATTCATCTGTTT
AAAAATGTCAGTATGCTCAG

Product: putative regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MLPGQGKFGVVISKIPVMQSGLKVIFNENLPDYELSFCRSHDELTLLQLRRAVLVVADISGEIAHPRAVCERYYSLMTQY
RDIHWVFMVSDSLYPLAVELLIRPESSLISESEPVNRLIEVICAGSRAAEQISRTLFAGDEDSDFASYHSAAMLTLSERK
VLRLLAKGWGINQIAALLKKSNKTISAQKNSAMRRLSLRSNAEMYAWINSAQGMQELNINSAYGEQMEWKKIVQPAMSPS

Sequences:

>Translated_240_residues
MLPGQGKFGVVISKIPVMQSGLKVIFNENLPDYELSFCRSHDELTLLQLRRAVLVVADISGEIAHPRAVCERYYSLMTQY
RDIHWVFMVSDSLYPLAVELLIRPESSLISESEPVNRLIEVICAGSRAAEQISRTLFAGDEDSDFASYHSAAMLTLSERK
VLRLLAKGWGINQIAALLKKSNKTISAQKNSAMRRLSLRSNAEMYAWINSAQGMQELNINSAYGEQMEWKKIVQPAMSPS
>Mature_240_residues
MLPGQGKFGVVISKIPVMQSGLKVIFNENLPDYELSFCRSHDELTLLQLRRAVLVVADISGEIAHPRAVCERYYSLMTQY
RDIHWVFMVSDSLYPLAVELLIRPESSLISESEPVNRLIEVICAGSRAAEQISRTLFAGDEDSDFASYHSAAMLTLSERK
VLRLLAKGWGINQIAALLKKSNKTISAQKNSAMRRLSLRSNAEMYAWINSAQGMQELNINSAYGEQMEWKKIVQPAMSPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790827, Length=231, Percent_Identity=62.7705627705628, Blast_Score=283, Evalue=7e-78,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 26928; Mature: 26928

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPGQGKFGVVISKIPVMQSGLKVIFNENLPDYELSFCRSHDELTLLQLRRAVLVVADIS
CCCCCCCCEEEEEECHHHHHCCCEEECCCCCCHHHHHHCCCCCHHHHHHHHHHEEEECCC
GEIAHPRAVCERYYSLMTQYRDIHWVFMVSDSLYPLAVELLIRPESSLISESEPVNRLIE
CCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHEEHHHEECCCHHHHCCCHHHHHHHH
VICAGSRAAEQISRTLFAGDEDSDFASYHSAAMLTLSERKVLRLLAKGWGINQIAALLKK
HHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHEEHHHHHHHHHHHCCCCHHHHHHHHHH
SNKTISAQKNSAMRRLSLRSNAEMYAWINSAQGMQELNINSAYGEQMEWKKIVQPAMSPS
CCCEECHHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MLPGQGKFGVVISKIPVMQSGLKVIFNENLPDYELSFCRSHDELTLLQLRRAVLVVADIS
CCCCCCCCEEEEEECHHHHHCCCEEECCCCCCHHHHHHCCCCCHHHHHHHHHHEEEECCC
GEIAHPRAVCERYYSLMTQYRDIHWVFMVSDSLYPLAVELLIRPESSLISESEPVNRLIE
CCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHEEHHHEECCCHHHHCCCHHHHHHHH
VICAGSRAAEQISRTLFAGDEDSDFASYHSAAMLTLSERKVLRLLAKGWGINQIAALLKK
HHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHEEHHHHHHHHHHHCCCCHHHHHHHHHH
SNKTISAQKNSAMRRLSLRSNAEMYAWINSAQGMQELNINSAYGEQMEWKKIVQPAMSPS
CCCEECHHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]