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The map label for this gene is yjiM [H]

Identifier: 238892896

GI number: 238892896

Start: 705884

End: 707035

Strand: Reverse

Name: yjiM [H]

Synonym: KP1_0717

Alternate gene names: 238892896

Gene position: 707035-705884 (Counterclockwise)

Preceding gene: 238892897

Following gene: 238892895

Centisome position: 13.47

GC content: 58.77

Gene sequence:

>1152_bases
ATGTCGCTTATCACCGATCTACCCGCCATTTTTGACCAGTTCTCAGAAGCTCGCCAGAAGGGCTTTCTCACCGTCATGGA
TCTTAAAGAGCAGAACGTACCGCTGGTGGGCACTTACTGCACCTTTATGCCCCAGGAGATCGCCATGGCGGCGGGCGCCG
TTGTCGTCTCGCTGTGCTCAACCTCCGATGAAACCATCGAGGAAGCGGAAAAAGATCTCCCGCGCAACCTCTGCCCGCTT
ATCAAAAGCAGCTACGGCTTCGGCAAAACCGATAAATGTCCCTACTTCTATTTCTCTGACCTGGTGGTTGGGGAAACCAC
CTGCGACGGCAAAAAGAAAATGTATGAGTACATGGCCGAGTTCAAGGCGGTCCACGTCATGCAGTTGCCGAACAGCGCCA
GCGATGCCGCCTCGCGCGCACTGTGGAAAACGGAGATCCTGCGCCTGCAGCAGGTGATTGAGGCCCGGTTTGGCACGCCG
ATTAGCGAGGCGGCGCTGCGCGAAGCCATCGTGTTGAAAAATCGCGAGCGCCGGGCGCTGGCCCACTTTTATCGTCTCGG
GCAGCTCAATCCGCCGGCGCTCAGCGGCGGCGACATCCTGAAAGTGGTGTACGGCGCCACTTTTCGTTTCGACAAAACCG
CCCTGATTGATGAACTGCATGCCATGGCGGAGCGCATCCATCAGGAGTGGCAGCAGGGTAAACGGCTGGAACCTCGTCCG
CGGATCCTGATCACCGGCTGCCCGATCGGCGGCGCGGCGGAAAAAGTGGTCCGCGCCATCGAGGAAAACGGCGGCTGGGT
GGTCGGCTATGAGAACTGCACCGGCGCGAAAGCGACCGAGCGCTGCGTGGCGGAAGAGGGTGACGTCTACGACGCCTTAA
CCGATAAATATCTCGCCATCGGCTGCTCCTGTATCTCCCCCAACGACCAGCGTCTGCAGCTGCTGAGCCAGATGGTGGAG
GAGTATCAGGCCGACGGGGTGATCGACGTCATTTTGCAGGCCTGCCATACCTATGCCGTGGAATCGCTGGCGATTAAACG
CCATCTGCGCCAACAGCACGATCTTCCTTACATGGCGATTGAAACCGACTATTCGACAGCGGACCTCGGCCAGCTCAGCA
CCCGCGTCGCCGCCTTTATCGAAATGCTTTAA

Upstream 100 bases:

>100_bases
TAACACCGCGTACAGACGCAGGAGATCAATAAAACCCTGCATACACCATGGCTATAATGGCGACTCTTTCAGCATCTCCC
GTGTACGGGGAAGGAAAACC

Downstream 100 bases:

>100_bases
GGAGCTGGCGTGAACTATACGGTTGGCATTGATTCCGGCTCCACCGCCACAAAAGGCATCCTGCTGGCGGACGGCGTCAT
CGTGCGCCGCTTCCTCTGCC

Product: putative 2-hydroxyglutaryl-CoA dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSLITDLPAIFDQFSEARQKGFLTVMDLKEQNVPLVGTYCTFMPQEIAMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPL
IKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKAVHVMQLPNSASDAASRALWKTEILRLQQVIEARFGTP
ISEAALREAIVLKNRERRALAHFYRLGQLNPPALSGGDILKVVYGATFRFDKTALIDELHAMAERIHQEWQQGKRLEPRP
RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATERCVAEEGDVYDALTDKYLAIGCSCISPNDQRLQLLSQMVE
EYQADGVIDVILQACHTYAVESLAIKRHLRQQHDLPYMAIETDYSTADLGQLSTRVAAFIEML

Sequences:

>Translated_383_residues
MSLITDLPAIFDQFSEARQKGFLTVMDLKEQNVPLVGTYCTFMPQEIAMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPL
IKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKAVHVMQLPNSASDAASRALWKTEILRLQQVIEARFGTP
ISEAALREAIVLKNRERRALAHFYRLGQLNPPALSGGDILKVVYGATFRFDKTALIDELHAMAERIHQEWQQGKRLEPRP
RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATERCVAEEGDVYDALTDKYLAIGCSCISPNDQRLQLLSQMVE
EYQADGVIDVILQACHTYAVESLAIKRHLRQQHDLPYMAIETDYSTADLGQLSTRVAAFIEML
>Mature_382_residues
SLITDLPAIFDQFSEARQKGFLTVMDLKEQNVPLVGTYCTFMPQEIAMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPLI
KSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKAVHVMQLPNSASDAASRALWKTEILRLQQVIEARFGTPI
SEAALREAIVLKNRERRALAHFYRLGQLNPPALSGGDILKVVYGATFRFDKTALIDELHAMAERIHQEWQQGKRLEPRPR
ILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATERCVAEEGDVYDALTDKYLAIGCSCISPNDQRLQLLSQMVEE
YQADGVIDVILQACHTYAVESLAIKRHLRQQHDLPYMAIETDYSTADLGQLSTRVAAFIEML

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0007 [H]

Homologues:

Organism=Escherichia coli, GI87082427, Length=383, Percent_Identity=86.9451697127937, Blast_Score=711, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010327 [H]

Pfam domain/function: PF06050 HGD-D [H]

EC number: NA

Molecular weight: Translated: 42672; Mature: 42541

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLITDLPAIFDQFSEARQKGFLTVMDLKEQNVPLVGTYCTFMPQEIAMAAGAVVVSLCS
CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEHHHHHCHHHHHHHHHHHHHHHHC
TSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAE
CCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHH
FKAVHVMQLPNSASDAASRALWKTEILRLQQVIEARFGTPISEAALREAIVLKNRERRAL
HHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH
AHFYRLGQLNPPALSGGDILKVVYGATFRFDKTALIDELHAMAERIHQEWQQGKRLEPRP
HHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATERCVAEEGDVYDALTDKYLAI
CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
GCSCISPNDQRLQLLSQMVEEYQADGVIDVILQACHTYAVESLAIKRHLRQQHDLPYMAI
EEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
ETDYSTADLGQLSTRVAAFIEML
ECCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLITDLPAIFDQFSEARQKGFLTVMDLKEQNVPLVGTYCTFMPQEIAMAAGAVVVSLCS
CHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEHHHHHCHHHHHHHHHHHHHHHHC
TSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAE
CCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHH
FKAVHVMQLPNSASDAASRALWKTEILRLQQVIEARFGTPISEAALREAIVLKNRERRAL
HHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH
AHFYRLGQLNPPALSGGDILKVVYGATFRFDKTALIDELHAMAERIHQEWQQGKRLEPRP
HHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATERCVAEEGDVYDALTDKYLAI
CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
GCSCISPNDQRLQLLSQMVEEYQADGVIDVILQACHTYAVESLAIKRHLRQQHDLPYMAI
EEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
ETDYSTADLGQLSTRVAAFIEML
ECCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]