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The map label for this gene is 238892803

Identifier: 238892803

GI number: 238892803

Start: 598753

End: 600030

Strand: Reverse

Name: 238892803

Synonym: KP1_0613

Alternate gene names: NA

Gene position: 600030-598753 (Counterclockwise)

Preceding gene: 238892804

Following gene: 238892800

Centisome position: 11.43

GC content: 32.47

Gene sequence:

>1278_bases
ATGAATAATGATGATTACCCATGGTTCAGAAAACGTGGTTATTTGCATTTCGATGAACCTGTTTCATTAAAAAAAGCGGT
TAAATATGTTTCCTCTCCAGAAAAAATAATAAAACATTCTTTTCTGCCATTTTTAAGCTTTGAAGTAAAATCGTTTAAAA
TCAAAAAAGACAAATCAACAAAACAATTAAGTAAAACTGAAAAATTAAGACCTATTGCCTATTCCTCACATTTGGATAGT
CATATTTATGCATTTTACGCAGAATATCTTACTGGACATTATGAATTATTGATCCAAGAAAACAATTTACACGAGAACAT
CCTTGCCTTCAGATCTTTAAATAAAAGCAATATAGAATTTGCCAAGAGAGCATTTGATACAATTACTGAAATGGGTGAGT
GTAGCGCTGTTGCATTAGATCTTTCTGGTTTTTTTGACAATTTAGATCATCAAATTTTGAAACACCAGTGGTGCAAAGTT
ATTGGGACTGAAGCGTTGCCGCAAGACCATTTTGCCATATACAAAAGTATAACAAGATATTCTAAAGTTGATAAAAATAG
AGCGTATGAGATTTTAGGTATATCAAAGAATAACCCCAAGTATAATAGACGCAAGATCTGCACCCCTGTTGATTTTAGAA
ATAAGATTAGAAAAAATGGTCTTATTATAGTTAATAATTCCCAAAAAGGTATACCCCAAGGCTCGCCAATTAGTGCTCTA
CTTTCAAATATATATATGCTTGACTTTGATATTGAAATGAGAGATTACGCGCAGGAACGTGGTGGCCATTATTATCGCTA
TTGTGATGATATGCTATTCATTGTACCAACTAAGTATAATAAAACTCTAGCAGGTGATGTAGCCCAGCGGATTAAGCATC
TTAAGGTAGAACTCAATACTAAGAAAACTGAGATTCGAGATTTTATATACAAAGACAGTACCTTAGTGGCAAATATGCCT
TTACAGTATCTTGGGTTTATTTTTGATGGGAGTAATATATTATTACGTTCATCTTCTCTCGCAAGATATTCGGAACGAAT
GAAAAGAGGTGTCCGCTTAGCAAAAGCTACAATGGACAGCAAGAATAGGATTAGAGAAAATAAAGGTGAAGCTTTAAAAG
CTTTATTTAAGAAAAAATTATATGCCAGATATTCACATATTGGAAGAAGGAATTTTTTGACTTATGGTTATCGCGCCGCG
AAGATCATGAATTCGAAAGCTATAAAAAGACAGTTAAAACCATTGCAGAAAAGATTGGAAAATGAAATACTAAAATAA

Upstream 100 bases:

>100_bases
AAGGTTGGAGAAAGACCACTTGGTTAAGCCGGAGGATGTGTCCTAGAATTGTCGCTATTCTGTCATCCTCCGGTTTTGCT
AATTTCATTCAGGGAATATA

Downstream 100 bases:

>100_bases
ATATTTGCTGGCCCGAATCATACAGGGCCACAATACAGTTGAAAACAAGCTATAATAAACAACATCTAATTTTTATATAC
TCTTTTTCCCTCCATTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MNNDDYPWFRKRGYLHFDEPVSLKKAVKYVSSPEKIIKHSFLPFLSFEVKSFKIKKDKSTKQLSKTEKLRPIAYSSHLDS
HIYAFYAEYLTGHYELLIQENNLHENILAFRSLNKSNIEFAKRAFDTITEMGECSAVALDLSGFFDNLDHQILKHQWCKV
IGTEALPQDHFAIYKSITRYSKVDKNRAYEILGISKNNPKYNRRKICTPVDFRNKIRKNGLIIVNNSQKGIPQGSPISAL
LSNIYMLDFDIEMRDYAQERGGHYYRYCDDMLFIVPTKYNKTLAGDVAQRIKHLKVELNTKKTEIRDFIYKDSTLVANMP
LQYLGFIFDGSNILLRSSSLARYSERMKRGVRLAKATMDSKNRIRENKGEALKALFKKKLYARYSHIGRRNFLTYGYRAA
KIMNSKAIKRQLKPLQKRLENEILK

Sequences:

>Translated_425_residues
MNNDDYPWFRKRGYLHFDEPVSLKKAVKYVSSPEKIIKHSFLPFLSFEVKSFKIKKDKSTKQLSKTEKLRPIAYSSHLDS
HIYAFYAEYLTGHYELLIQENNLHENILAFRSLNKSNIEFAKRAFDTITEMGECSAVALDLSGFFDNLDHQILKHQWCKV
IGTEALPQDHFAIYKSITRYSKVDKNRAYEILGISKNNPKYNRRKICTPVDFRNKIRKNGLIIVNNSQKGIPQGSPISAL
LSNIYMLDFDIEMRDYAQERGGHYYRYCDDMLFIVPTKYNKTLAGDVAQRIKHLKVELNTKKTEIRDFIYKDSTLVANMP
LQYLGFIFDGSNILLRSSSLARYSERMKRGVRLAKATMDSKNRIRENKGEALKALFKKKLYARYSHIGRRNFLTYGYRAA
KIMNSKAIKRQLKPLQKRLENEILK
>Mature_425_residues
MNNDDYPWFRKRGYLHFDEPVSLKKAVKYVSSPEKIIKHSFLPFLSFEVKSFKIKKDKSTKQLSKTEKLRPIAYSSHLDS
HIYAFYAEYLTGHYELLIQENNLHENILAFRSLNKSNIEFAKRAFDTITEMGECSAVALDLSGFFDNLDHQILKHQWCKV
IGTEALPQDHFAIYKSITRYSKVDKNRAYEILGISKNNPKYNRRKICTPVDFRNKIRKNGLIIVNNSQKGIPQGSPISAL
LSNIYMLDFDIEMRDYAQERGGHYYRYCDDMLFIVPTKYNKTLAGDVAQRIKHLKVELNTKKTEIRDFIYKDSTLVANMP
LQYLGFIFDGSNILLRSSSLARYSERMKRGVRLAKATMDSKNRIRENKGEALKALFKKKLYARYSHIGRRNFLTYGYRAA
KIMNSKAIKRQLKPLQKRLENEILK

Specific function: Unknown

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49700; Mature: 49700

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50878 RT_POL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDDYPWFRKRGYLHFDEPVSLKKAVKYVSSPEKIIKHSFLPFLSFEVKSFKIKKDKST
CCCCCCCHHHHCCCEECCCCCCHHHHHHHHCCHHHHHHHHCCHHHEEEHHEEEEECCCCH
KQLSKTEKLRPIAYSSHLDSHIYAFYAEYLTGHYELLIQENNLHENILAFRSLNKSNIEF
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHHHH
AKRAFDTITEMGECSAVALDLSGFFDNLDHQILKHQWCKVIGTEALPQDHFAIYKSITRY
HHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SKVDKNRAYEILGISKNNPKYNRRKICTPVDFRNKIRKNGLIIVNNSQKGIPQGSPISAL
HHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCHHHH
LSNIYMLDFDIEMRDYAQERGGHYYRYCDDMLFIVPTKYNKTLAGDVAQRIKHLKVELNT
HHCCEEEEECCHHHHHHHHHCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHEEEECC
KKTEIRDFIYKDSTLVANMPLQYLGFIFDGSNILLRSSSLARYSERMKRGVRLAKATMDS
CHHHHHHHHHCCCEEEECCCHHHHHEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHCH
KNRIRENKGEALKALFKKKLYARYSHIGRRNFLTYGYRAAKIMNSKAIKRQLKPLQKRLE
HHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHH
NEILK
HHHCC
>Mature Secondary Structure
MNNDDYPWFRKRGYLHFDEPVSLKKAVKYVSSPEKIIKHSFLPFLSFEVKSFKIKKDKST
CCCCCCCHHHHCCCEECCCCCCHHHHHHHHCCHHHHHHHHCCHHHEEEHHEEEEECCCCH
KQLSKTEKLRPIAYSSHLDSHIYAFYAEYLTGHYELLIQENNLHENILAFRSLNKSNIEF
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHHHH
AKRAFDTITEMGECSAVALDLSGFFDNLDHQILKHQWCKVIGTEALPQDHFAIYKSITRY
HHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SKVDKNRAYEILGISKNNPKYNRRKICTPVDFRNKIRKNGLIIVNNSQKGIPQGSPISAL
HHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCHHHH
LSNIYMLDFDIEMRDYAQERGGHYYRYCDDMLFIVPTKYNKTLAGDVAQRIKHLKVELNT
HHCCEEEEECCHHHHHHHHHCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHEEEECC
KKTEIRDFIYKDSTLVANMPLQYLGFIFDGSNILLRSSSLARYSERMKRGVRLAKATMDS
CHHHHHHHHHCCCEEEECCCHHHHHEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHCH
KNRIRENKGEALKALFKKKLYARYSHIGRRNFLTYGYRAAKIMNSKAIKRQLKPLQKRLE
HHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHH
NEILK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA