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The map label for this gene is yurN [H]

Identifier: 238892766

GI number: 238892766

Start: 561076

End: 561960

Strand: Reverse

Name: yurN [H]

Synonym: KP1_0569

Alternate gene names: 238892766

Gene position: 561960-561076 (Counterclockwise)

Preceding gene: 238892767

Following gene: 238892765

Centisome position: 10.71

GC content: 61.47

Gene sequence:

>885_bases
ATGCGCGTCACCATGAGAAAGACCTGGCTTCCCTGGCTGATCCTGTCGCCTTCCCTGCTGTTTTTACTGCTGTTTACCTG
GTTCCCGCTAGGGCGTTCGGTGTATGACAGCCTGTTTGATACCCGCATGGCCAGCGACGGCGCGCAGTACGTCGGACTGG
ATAACTTCGCCCGCCTGTTTGCCGACGGCGTTTTCTGGCAGTCGCTGGTCAATAACCTGCTCTATATCCTGCTGACGGTG
GTGCCCGGGGTGACCCTCGCCCTGCTGCTGGCGGTCGCCCTGAGCGAGAACCATCGCGTCAACCGCTGGCTGCGCACCGC
CTTTTTCTTCCCGATGATTATCCCGATGGTCAGCGCCGCTGCACTGTGGCTGTTTATCTTTATGCCCGGCCTCGGCCTGC
TCGACCACTATCTGGCGAAGCTGTTCGGGCCGATGAACAACAACTGGCTGGGACGCAGCAACAGCGCGCTGCTGGCCCTG
GCGCTGATCGGCGTGTGGAAGTTCGCCGGCTACTACATGCTGTTTTTCCTCGCCGGGCTGCAGAGCATTCCGGCCTCGAC
GCGGGAAGCGGCGCTGATGGAGGGGGCTACCCGCACGCAGGTCTTTTTTAAGGTCACGCTACCGCTGCTGCGCCCGACCC
TGAGCTTTGTGATCACCACCGCGCTGATCTACTCCATCACCCAGATCGACCACGTGGCGGTGATGACCCGCGGCGGGCCG
GACAACGCCACCACCGTGCTGCTCTATTACATCCAGAATCTCGCCTGGGATACCCACGACCTCGGTAAAGCCTCCGCCGC
CACCTTCCTGACCCTGGCCGGGCTGTTCGCCTTCTCGCTGATTAACCTGAAACTGCTGGAGAAAGGAGCCCACTATGAGC
GCTGA

Upstream 100 bases:

>100_bases
CCGGCGTTTTCCCCGTCGCTTCATCAAACCGTCATCTCCCCGCCATGCCTCTGTAGTCATTGCTTCCCACAATCCGGGCT
TCGATAAATGGCTGAACGAG

Downstream 100 bases:

>100_bases
AATCTCGCCGCTGCTGGTCCGCACGCCCGCCGCCGCCCGTCCGCTGTGGCTGCGCCTGCGCCGCTCGTCGCCCTTTACGC
TCACAGTATTAATGTGCTGC

Product: putative SN-glycerol-3-phosphate transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MRVTMRKTWLPWLILSPSLLFLLLFTWFPLGRSVYDSLFDTRMASDGAQYVGLDNFARLFADGVFWQSLVNNLLYILLTV
VPGVTLALLLAVALSENHRVNRWLRTAFFFPMIIPMVSAAALWLFIFMPGLGLLDHYLAKLFGPMNNNWLGRSNSALLAL
ALIGVWKFAGYYMLFFLAGLQSIPASTREAALMEGATRTQVFFKVTLPLLRPTLSFVITTALIYSITQIDHVAVMTRGGP
DNATTVLLYYIQNLAWDTHDLGKASAATFLTLAGLFAFSLINLKLLEKGAHYER

Sequences:

>Translated_294_residues
MRVTMRKTWLPWLILSPSLLFLLLFTWFPLGRSVYDSLFDTRMASDGAQYVGLDNFARLFADGVFWQSLVNNLLYILLTV
VPGVTLALLLAVALSENHRVNRWLRTAFFFPMIIPMVSAAALWLFIFMPGLGLLDHYLAKLFGPMNNNWLGRSNSALLAL
ALIGVWKFAGYYMLFFLAGLQSIPASTREAALMEGATRTQVFFKVTLPLLRPTLSFVITTALIYSITQIDHVAVMTRGGP
DNATTVLLYYIQNLAWDTHDLGKASAATFLTLAGLFAFSLINLKLLEKGAHYER
>Mature_294_residues
MRVTMRKTWLPWLILSPSLLFLLLFTWFPLGRSVYDSLFDTRMASDGAQYVGLDNFARLFADGVFWQSLVNNLLYILLTV
VPGVTLALLLAVALSENHRVNRWLRTAFFFPMIIPMVSAAALWLFIFMPGLGLLDHYLAKLFGPMNNNWLGRSNSALLAL
ALIGVWKFAGYYMLFFLAGLQSIPASTREAALMEGATRTQVFFKVTLPLLRPTLSFVITTALIYSITQIDHVAVMTRGGP
DNATTVLLYYIQNLAWDTHDLGKASAATFLTLAGLFAFSLINLKLLEKGAHYER

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=293, Percent_Identity=32.0819112627986, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1787570, Length=239, Percent_Identity=28.4518828451883, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1790465, Length=264, Percent_Identity=26.5151515151515, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32971; Mature: 32971

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTMRKTWLPWLILSPSLLFLLLFTWFPLGRSVYDSLFDTRMASDGAQYVGLDNFARLF
CCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ADGVFWQSLVNNLLYILLTVVPGVTLALLLAVALSENHRVNRWLRTAFFFPMIIPMVSAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
ALWLFIFMPGLGLLDHYLAKLFGPMNNNWLGRSNSALLALALIGVWKFAGYYMLFFLAGL
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QSIPASTREAALMEGATRTQVFFKVTLPLLRPTLSFVITTALIYSITQIDHVAVMTRGGP
HHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
DNATTVLLYYIQNLAWDTHDLGKASAATFLTLAGLFAFSLINLKLLEKGAHYER
CCHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRVTMRKTWLPWLILSPSLLFLLLFTWFPLGRSVYDSLFDTRMASDGAQYVGLDNFARLF
CCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ADGVFWQSLVNNLLYILLTVVPGVTLALLLAVALSENHRVNRWLRTAFFFPMIIPMVSAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
ALWLFIFMPGLGLLDHYLAKLFGPMNNNWLGRSNSALLALALIGVWKFAGYYMLFFLAGL
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QSIPASTREAALMEGATRTQVFFKVTLPLLRPTLSFVITTALIYSITQIDHVAVMTRGGP
HHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
DNATTVLLYYIQNLAWDTHDLGKASAATFLTLAGLFAFSLINLKLLEKGAHYER
CCHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]