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The map label for this gene is iolB [H]

Identifier: 238892755

GI number: 238892755

Start: 545780

End: 546589

Strand: Direct

Name: iolB [H]

Synonym: KP1_0553

Alternate gene names: 238892755

Gene position: 545780-546589 (Clockwise)

Preceding gene: 238892754

Following gene: 238892758

Centisome position: 10.4

GC content: 61.85

Gene sequence:

>810_bases
ATGTCGTTACTGGCTAAATCGCGAAAAGAGGGACAGATCCAGCATATTACGCCGCAAAGCGCCGGTTGGCGCTATATCGG
CTTTGATGTCTGGATGTTGAAAAAAGGGCAGACCGTGACGCTGGAGAGCGGCGATCGCGAGCTGTGCCTGGTGCTGGTCG
CCGGGCTGGCGTCGGTGAAAACGCAGCATGCCGATTTCCCGAATCTCGGTAAACGGATGTCGCCGTTTGAACGCACCCCG
CCGTGGTCGGTCTACGTCCCGCCGCAGGATAAAGTCGAGGTGACTGCCGATTCCGATCTGGAGCTGGCGGTATGCAGCGC
GCCGGGCAAAGGCAGCTTCCCGGCACGCCTCATTCGGCCGGAAGACGTCGGCGTAGAGCACCGTGGGAAAGGGCGCAACC
AGCGTCGGGTGCATAATATTCTGCCGGACAGCGCCGAGGCGGACTGCCTGCTGGTGGTGGAAGTCTACACCGACGAGGGG
GCCACCAGCTCGTGGCCGTCGCATAAGCATGATACCGCCCAGCCGGGCAAAGAGACGCAGCTGGAAGAAACCTACTATCA
CCGCTTCGATCCGCCGCAGGGCTTTGCCTTCCAGCGGGTCTACACCGACGACCGCAGCCTGGACGCCTGTATGGCGCCCT
ACAACCACGATGTGGTGATGGTGCCGCGCGGTTACCATCCGGTGGCGGCGATTGCCGGTTACGACAGCTACTATCTGAAC
GTGATGGCCGGGCCGGACCGGAAATGGCTGTTCACCTGGGAAGATGACCACGCCTGGATCAACACGCCGGAGTATCCGCG
CCACGACTGA

Upstream 100 bases:

>100_bases
CACGCGTATGAAGACCGCCACCGTACGCTGGCCGGCAGGGCAGCAGACCGTATCTGAATTCAGCATGCCGACGTTAGGTT
AATCGGCAAAGGAGAGCGCC

Downstream 100 bases:

>100_bases
CGTGCGGTGCAGAAGCGGATAAAGAAGGCCGGTTAGCGATGCTAACCGGCCTTCCTGTTTGAGAGCGGCGGGTATATTTT
CGCGAAACGCTCCGCGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSLLAKSRKEGQIQHITPQSAGWRYIGFDVWMLKKGQTVTLESGDRELCLVLVAGLASVKTQHADFPNLGKRMSPFERTP
PWSVYVPPQDKVEVTADSDLELAVCSAPGKGSFPARLIRPEDVGVEHRGKGRNQRRVHNILPDSAEADCLLVVEVYTDEG
ATSSWPSHKHDTAQPGKETQLEETYYHRFDPPQGFAFQRVYTDDRSLDACMAPYNHDVVMVPRGYHPVAAIAGYDSYYLN
VMAGPDRKWLFTWEDDHAWINTPEYPRHD

Sequences:

>Translated_269_residues
MSLLAKSRKEGQIQHITPQSAGWRYIGFDVWMLKKGQTVTLESGDRELCLVLVAGLASVKTQHADFPNLGKRMSPFERTP
PWSVYVPPQDKVEVTADSDLELAVCSAPGKGSFPARLIRPEDVGVEHRGKGRNQRRVHNILPDSAEADCLLVVEVYTDEG
ATSSWPSHKHDTAQPGKETQLEETYYHRFDPPQGFAFQRVYTDDRSLDACMAPYNHDVVMVPRGYHPVAAIAGYDSYYLN
VMAGPDRKWLFTWEDDHAWINTPEYPRHD
>Mature_268_residues
SLLAKSRKEGQIQHITPQSAGWRYIGFDVWMLKKGQTVTLESGDRELCLVLVAGLASVKTQHADFPNLGKRMSPFERTPP
WSVYVPPQDKVEVTADSDLELAVCSAPGKGSFPARLIRPEDVGVEHRGKGRNQRRVHNILPDSAEADCLLVVEVYTDEGA
TSSWPSHKHDTAQPGKETQLEETYYHRFDPPQGFAFQRVYTDDRSLDACMAPYNHDVVMVPRGYHPVAAIAGYDSYYLNV
MAGPDRKWLFTWEDDHAWINTPEYPRHD

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 30426; Mature: 30295

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLAKSRKEGQIQHITPQSAGWRYIGFDVWMLKKGQTVTLESGDRELCLVLVAGLASVK
CCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEEECCCEEEEECCCCCEEHHHHHHHHHHH
TQHADFPNLGKRMSPFERTPPWSVYVPPQDKVEVTADSDLELAVCSAPGKGSFPARLIRP
HCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCCCCEEEECC
EDVGVEHRGKGRNQRRVHNILPDSAEADCLLVVEVYTDEGATSSWPSHKHDTAQPGKETQ
CCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
LEETYYHRFDPPQGFAFQRVYTDDRSLDACMAPYNHDVVMVPRGYHPVAAIAGYDSYYLN
HHHHHHHCCCCCCCCEEEEEECCCCCCHHHCCCCCCCEEEECCCCCCEEEEECCCEEEEE
VMAGPDRKWLFTWEDDHAWINTPEYPRHD
EEECCCCEEEEEECCCCEEECCCCCCCCC
>Mature Secondary Structure 
SLLAKSRKEGQIQHITPQSAGWRYIGFDVWMLKKGQTVTLESGDRELCLVLVAGLASVK
CCCCCCCCCCCEEEECCCCCCCEEEEEEEEEEECCCEEEEECCCCCEEHHHHHHHHHHH
TQHADFPNLGKRMSPFERTPPWSVYVPPQDKVEVTADSDLELAVCSAPGKGSFPARLIRP
HCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCCCCEEEECC
EDVGVEHRGKGRNQRRVHNILPDSAEADCLLVVEVYTDEGATSSWPSHKHDTAQPGKETQ
CCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
LEETYYHRFDPPQGFAFQRVYTDDRSLDACMAPYNHDVVMVPRGYHPVAAIAGYDSYYLN
HHHHHHHCCCCCCCCEEEEEECCCCCCHHHCCCCCCCEEEECCCCCCEEEEECCCEEEEE
VMAGPDRKWLFTWEDDHAWINTPEYPRHD
EEECCCCEEEEEECCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA