Click here to switch to the map view.

The map label for this gene is yjgP [H]

Identifier: 238892750

GI number: 238892750

Start: 539253

End: 540350

Strand: Direct

Name: yjgP [H]

Synonym: KP1_0548

Alternate gene names: 238892750

Gene position: 539253-540350 (Clockwise)

Preceding gene: 238892745

Following gene: 238892751

Centisome position: 10.27

GC content: 59.47

Gene sequence:

>1098_bases
GTGATAATCATAAGATATCTGGTTCGTGAGACGCTGAAAAGCCAGTTGGCGATCCTATTCATCCTGTTACTGATTTTCTT
TTGTCAGAAATTAGTCAGGATCCTCGGCGCCGCGGTGGATGGCGATATCCCAACCAATCTGGTGCTCTCGCTGTTGGGGC
TCGGCATCCCGGAGATGGCGCAGCTTATCCTGCCGTTAAGTCTGTTCCTTGGCCTGCTGATGACCCTCGGCAAGCTGTAC
ACCGAAAGTGAAATTACGGTGATGCACGCCTGCGGCCTGAGCAAAGCCGTGCTGATCAAGGCGGCGATGATCCTCGCGCT
GTTCACCGGCGCGGTGGCGGCGGTCAACGTTATGTGGGCGGGGCCGTGGTCGTCGCGCCATCAGGACGAAGTGCTGGCCG
AAGCTAAAGCCAACCCCGGCATGGCGGCGCTGGCCCAGGGCCAGTTCCAGCAGGCCAGCGATGGTAACGCGGTGATGTTT
ATCGAAAGCGTCAACGGCAACCGCTTCCATGACGTCTTCCTTGCCCAGCTGCGTCCGAAAGGCAATGCGCGCCCCTCGGT
GGTGGTGGCGGATTCCGGCGAGCTGTCGCAGCAGAAAGACGGCTCGCAGGTGGTGACCCTCAACAAGGGCACCCGCTTTG
AAGGCACCGCGATGCTCCGCGACTTCCGCATTACCGACTTCAATAACTATCAGGCTATTATCGGCCACCAGGCGGTGAGC
GCCGATCCGGACGACACCGAACAGATGGATATGCGCACCTTGTGGAAAACCCACACCGACCGCGCGCGCGCCGAACTGCA
CTGGCGCTTCACGCTGGTGGCGACCGTCTTCATTATGGCGCTGATGGTGGTGCCGCTCAGCGTGGTGAACCCGCGTCAGG
GCCGTGTGCTGTCGATGCTGCCGGCGATGCTGCTTTACCTGGTGTTCTTCCTGTTGCAAACGTCGATTAAGTCGAACGGC
GGCAAAGGCAAAATGGACCCGGCTATCTGGATGTGGGCGATTAACCTGCTCTATTTTGCGCTGGCGGTGCTGTTAAACCT
GTGGGACACGGTGCCGATGCGCCGCTTCCGCGCCCGTTTTAATAAAGGAGCGGCCTGA

Upstream 100 bases:

>100_bases
CTTAGCGACGTTTTCGACGACCAAAGAGAATAAATGACGTTTAAGCCATGAAACAAGCAATTTTCCTGCACTAAAACGGG
TTTTTACGGGCGTATTTATA

Downstream 100 bases:

>100_bases
TGCAGGCGTTTGGCGTACTTGACCGTTATATCGGTAAGACGATTTTCAACACCATCATGATGACCCTGTTCATGCTGGTG
TCGCTCTCCGGCATTATCAA

Product: putative transport system transmembrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGIPEMAQLILPLSLFLGLLMTLGKLY
TESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMF
IESVNGNRFHDVFLAQLRPKGNARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVS
ADPDDTEQMDMRTLWKTHTDRARAELHWRFTLVATVFIMALMVVPLSVVNPRQGRVLSMLPAMLLYLVFFLLQTSIKSNG
GKGKMDPAIWMWAINLLYFALAVLLNLWDTVPMRRFRARFNKGAA

Sequences:

>Translated_365_residues
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGIPEMAQLILPLSLFLGLLMTLGKLY
TESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMF
IESVNGNRFHDVFLAQLRPKGNARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVS
ADPDDTEQMDMRTLWKTHTDRARAELHWRFTLVATVFIMALMVVPLSVVNPRQGRVLSMLPAMLLYLVFFLLQTSIKSNG
GKGKMDPAIWMWAINLLYFALAVLLNLWDTVPMRRFRARFNKGAA
>Mature_365_residues
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGIPEMAQLILPLSLFLGLLMTLGKLY
TESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMF
IESVNGNRFHDVFLAQLRPKGNARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVS
ADPDDTEQMDMRTLWKTHTDRARAELHWRFTLVATVFIMALMVVPLSVVNPRQGRVLSMLPAMLLYLVFFLLQTSIKSNG
GKGKMDPAIWMWAINLLYFALAVLLNLWDTVPMRRFRARFNKGAA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=365, Percent_Identity=85.4794520547945, Blast_Score=588, Evalue=1e-169,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 40392; Mature: 40392

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGIPEMA
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHH
QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEC
GPWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMFIESVNGNRFHDVFLAQLRPK
CCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCC
GNARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVS
CCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHEEEECCCCCCHHHHCCCCCC
ADPDDTEQMDMRTLWKTHTDRARAELHWRFTLVATVFIMALMVVPLSVVNPRQGRVLSML
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
PAMLLYLVFFLLQTSIKSNGGKGKMDPAIWMWAINLLYFALAVLLNLWDTVPMRRFRARF
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKGAA
CCCCC
>Mature Secondary Structure
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGIPEMA
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHH
QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEC
GPWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMFIESVNGNRFHDVFLAQLRPK
CCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCC
GNARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVS
CCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHEEEECCCCCCHHHHCCCCCC
ADPDDTEQMDMRTLWKTHTDRARAELHWRFTLVATVFIMALMVVPLSVVNPRQGRVLSML
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
PAMLLYLVFFLLQTSIKSNGGKGKMDPAIWMWAINLLYFALAVLLNLWDTVPMRRFRARF
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKGAA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]