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The map label for this gene is ybhE [H]

Identifier: 238892725

GI number: 238892725

Start: 509545

End: 510699

Strand: Direct

Name: ybhE [H]

Synonym: KP1_0518

Alternate gene names: 238892725

Gene position: 509545-510699 (Clockwise)

Preceding gene: 238892724

Following gene: 238892726

Centisome position: 9.71

GC content: 60.52

Gene sequence:

>1155_bases
ATGCCTGTCGCTCGTCATCTGCTTGTCGCTTCACTGTCCCTGTTTGCCGCCGCCGCGGGCGCCGCGCAAACCCACTATGC
CTGGGTAGGCACCTATAACCCCAATGGCGAAGGTCTGTATCGCTTTACCGTCGATGCCAAAACTGGCGCCCTGCGCGATA
AGACGCTGGTGAGCTCGTTGCCGAATGTCGCGCAGTTAACCGTGTCGCGCGATGGCAAAACGCTGTATGCCGCCAGTGAA
GTCGAAAAAGGCGTGGTGCAGGCGTGGCGCATTGAAAAGAACGGCGAGCTGACCGCGCTCAATCAGGTCGCCTCCGGCGG
CGCCGGGCCGGTGTATCTCTCCCTGACGCCGGACGGTAAGCATCTGCTGGTGGCTAACTATGTCAGCGGCAGTATCGCCG
TGCTACCGGTGCAAGAAGATGGTAGCCTGGCTGAGGCGGTGGACAGGCATCAGGATGAAGGCCCGGCAGGCGCCGAACGC
CCGGCGGCGGCCGTCGAGGGCAGCTTCGCCATCAGCGATCACAACGGCCCGCATGCCCATATGATCGCCGCCGATCCCAG
CGGGAAATACGTTTACTCTACCGATCTGGGGCTGGATCGGATCTATCAGTATCGGCTGGATAGCGCCAGCGGCAAGCTAA
CGCCGAACGATCCGCCGTTTATCGCCGCCTCGTCGCCGGGAGCCGGCCCGCGCCACTTCGTCTTTACGCCAAAGGGCGAC
GGCCTGTGGCTGATTAATGAGGAAGCGTCGACGCTGACCTTCTATCATCTGGATAAGCAAAGCGGCCTGCTGCGTGAAGG
CAAAACTGTCTCCGCGCTGCCGGAAGGGTATAAAGGCACCAGCTTTGCCGCCGGACTTGTGTTGAGCAACGATGGCAAAC
AGCTATATGTCGCCAACCGCCTGCATAACAGCATTGCCCACTTCACGGTGCTGGCCGACGGCAGCCTGAGTCACCAGGAA
GATATCTGGACGCGTGGCGATTATCCCCGCACCCTGACGCTGGATAATCAGGGGCAGTGGCTGTACGTCATGAACCAGCG
TAGCGATAATATTACCCGCTTCAGCGTGGCGCCGAAGGATGGCAAATTAACCTTTGCCTCCGACTATACGCCGGTCGGTA
GCCCATCGCAGATGGTGATATCCGCCCAACCCTGA

Upstream 100 bases:

>100_bases
GCTGCTGGAGATGACCAAACAGTTAGTTAAGTAGTGCCCTTGTCCCTCACCCTCAAAGGGTGAGGAGCAGCTTATCCCAC
TGAACCATCAAGGAGTTGCT

Downstream 100 bases:

>100_bases
GCCGTAACAACAAGGAACTGACATGCGATTTCCCAACCAACGCTTAGCGCAACTCTTCACCCTACTGCGAAATGAAACGC
TGCCGCAGGATGAGCTGGCG

Product: putative isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MPVARHLLVASLSLFAAAAGAAQTHYAWVGTYNPNGEGLYRFTVDAKTGALRDKTLVSSLPNVAQLTVSRDGKTLYAASE
VEKGVVQAWRIEKNGELTALNQVASGGAGPVYLSLTPDGKHLLVANYVSGSIAVLPVQEDGSLAEAVDRHQDEGPAGAER
PAAAVEGSFAISDHNGPHAHMIAADPSGKYVYSTDLGLDRIYQYRLDSASGKLTPNDPPFIAASSPGAGPRHFVFTPKGD
GLWLINEEASTLTFYHLDKQSGLLREGKTVSALPEGYKGTSFAAGLVLSNDGKQLYVANRLHNSIAHFTVLADGSLSHQE
DIWTRGDYPRTLTLDNQGQWLYVMNQRSDNITRFSVAPKDGKLTFASDYTPVGSPSQMVISAQP

Sequences:

>Translated_384_residues
MPVARHLLVASLSLFAAAAGAAQTHYAWVGTYNPNGEGLYRFTVDAKTGALRDKTLVSSLPNVAQLTVSRDGKTLYAASE
VEKGVVQAWRIEKNGELTALNQVASGGAGPVYLSLTPDGKHLLVANYVSGSIAVLPVQEDGSLAEAVDRHQDEGPAGAER
PAAAVEGSFAISDHNGPHAHMIAADPSGKYVYSTDLGLDRIYQYRLDSASGKLTPNDPPFIAASSPGAGPRHFVFTPKGD
GLWLINEEASTLTFYHLDKQSGLLREGKTVSALPEGYKGTSFAAGLVLSNDGKQLYVANRLHNSIAHFTVLADGSLSHQE
DIWTRGDYPRTLTLDNQGQWLYVMNQRSDNITRFSVAPKDGKLTFASDYTPVGSPSQMVISAQP
>Mature_383_residues
PVARHLLVASLSLFAAAAGAAQTHYAWVGTYNPNGEGLYRFTVDAKTGALRDKTLVSSLPNVAQLTVSRDGKTLYAASEV
EKGVVQAWRIEKNGELTALNQVASGGAGPVYLSLTPDGKHLLVANYVSGSIAVLPVQEDGSLAEAVDRHQDEGPAGAERP
AAAVEGSFAISDHNGPHAHMIAADPSGKYVYSTDLGLDRIYQYRLDSASGKLTPNDPPFIAASSPGAGPRHFVFTPKGDG
LWLINEEASTLTFYHLDKQSGLLREGKTVSALPEGYKGTSFAAGLVLSNDGKQLYVANRLHNSIAHFTVLADGSLSHQED
IWTRGDYPRTLTLDNQGQWLYVMNQRSDNITRFSVAPKDGKLTFASDYTPVGSPSQMVISAQP

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=352, Percent_Identity=26.9886363636364, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 41010; Mature: 40879

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVARHLLVASLSLFAAAAGAAQTHYAWVGTYNPNGEGLYRFTVDAKTGALRDKTLVSSL
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHC
PNVAQLTVSRDGKTLYAASEVEKGVVQAWRIEKNGELTALNQVASGGAGPVYLSLTPDGK
CCEEEEEEECCCCEEEEHHHHHHCCEEEEEECCCCCEEEEHHHHCCCCCEEEEEECCCCC
HLLVANYVSGSIAVLPVQEDGSLAEAVDRHQDEGPAGAERPAAAVEGSFAISDHNGPHAH
EEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHCCCEEEEECCCCCEEE
MIAADPSGKYVYSTDLGLDRIYQYRLDSASGKLTPNDPPFIAASSPGAGPRHFVFTPKGD
EEEECCCCCEEEEECCCHHHHHEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCC
GLWLINEEASTLTFYHLDKQSGLLREGKTVSALPEGYKGTSFAAGLVLSNDGKQLYVANR
CEEEECCCCCEEEEEEECCCCCHHHCCCEEECCCCCCCCCCEEEEEEEECCCCEEEEEHH
LHNSIAHFTVLADGSLSHQEDIWTRGDYPRTLTLDNQGQWLYVMNQRSDNITRFSVAPKD
HHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCC
GKLTFASDYTPVGSPSQMVISAQP
CCEEEECCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
PVARHLLVASLSLFAAAAGAAQTHYAWVGTYNPNGEGLYRFTVDAKTGALRDKTLVSSL
CHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHC
PNVAQLTVSRDGKTLYAASEVEKGVVQAWRIEKNGELTALNQVASGGAGPVYLSLTPDGK
CCEEEEEEECCCCEEEEHHHHHHCCEEEEEECCCCCEEEEHHHHCCCCCEEEEEECCCCC
HLLVANYVSGSIAVLPVQEDGSLAEAVDRHQDEGPAGAERPAAAVEGSFAISDHNGPHAH
EEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHCCCEEEEECCCCCEEE
MIAADPSGKYVYSTDLGLDRIYQYRLDSASGKLTPNDPPFIAASSPGAGPRHFVFTPKGD
EEEECCCCCEEEEECCCHHHHHEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCC
GLWLINEEASTLTFYHLDKQSGLLREGKTVSALPEGYKGTSFAAGLVLSNDGKQLYVANR
CEEEECCCCCEEEEEEECCCCCHHHCCCEEECCCCCCCCCCEEEEEEEECCCCEEEEEHH
LHNSIAHFTVLADGSLSHQEDIWTRGDYPRTLTLDNQGQWLYVMNQRSDNITRFSVAPKD
HHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCC
GKLTFASDYTPVGSPSQMVISAQP
CCEEEECCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]