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The map label for this gene is yjfQ [H]

Identifier: 238892670

GI number: 238892670

Start: 459596

End: 460351

Strand: Reverse

Name: yjfQ [H]

Synonym: KP1_0457

Alternate gene names: 238892670

Gene position: 460351-459596 (Counterclockwise)

Preceding gene: 238892671

Following gene: 238892668

Centisome position: 8.77

GC content: 57.8

Gene sequence:

>756_bases
ATGACGGAAGCGCAAAGGCACCAAATTCTGCTGGATCTGCTCGCCCAAACGGGGTTTGTTACCGTGGAGCAGGTGATGTC
GCGGCTCGGGATCTCACCCGCTACCGCCCGACGTGATATCAACAAGCTGGATGAAAGCGGCAAACTGAAAAAGGTTCGTA
ATGGCGCGGAAGCCATCAGCGAACAGCGCCCCCGCTGGACGCCGATGAACATCCACCAGGCGCAAAATCTGGATGAAAAA
GTGCGTATTGCACGCGCCGCTTCGCAACTGATCGCGCCGGGTGAGAGCATCGTCATTAACTGCGGCTCCACCGCCTTTCT
GTTGGGTCGGGAACTGTGCGGCAAACCGGTGCAGATCATCACCAACTATCTGCCGCTGGCTAACTACCTGATCGACCAGG
AGCATGACAGCGTGATTATCATGGGCGGCCAGTACAACCGCAGCCACGCCATCACCCTCAGCCCCCACGGTAGCGAGAAC
AGCCTCTATGCCGGACACTGGATGTTTACCAGCGGCAAAGGGCTCACCGCCGAAGGCCTCTACAAAACGGATATGTTGAC
CGCCATGGCCGAGCAAAAAATGCTTAACGTGGTCGGCAAACTGGCGGTGCTGGTCGACAGCAGCAAGATCGGCGAGCGCG
CCGGGATGCTATTCAGCCAGGCCGGACAAATAGACGTGGTGATCACCGGCAAACAGGCCGATGCCGCGATCCTCAAACAG
CTTGAGGATCAAGGCGTCAGCGTAATCCGCGTTTAA

Upstream 100 bases:

>100_bases
CCGGCAGGCCCTGCCTGCCGGAAATACCCCGCCGCAGGGTTAGTATTTTCACATGATTTCAAATATCATCTTTGCCGTTC
ACTTTTAATCGGATTCGCTC

Downstream 100 bases:

>100_bases
AGGTGCTGCTGAAAAAAGGCGACCGTGGTAGCCAGCGCCTCTGGCGTAATGCGATGGCGGACGCCTTTCTGCCAGACACA
GGTCAGCCTGGCGGCAAGGT

Product: transcriptional repressor UlaR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTEAQRHQILLDLLAQTGFVTVEQVMSRLGISPATARRDINKLDESGKLKKVRNGAEAISEQRPRWTPMNIHQAQNLDEK
VRIARAASQLIAPGESIVINCGSTAFLLGRELCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNRSHAITLSPHGSEN
SLYAGHWMFTSGKGLTAEGLYKTDMLTAMAEQKMLNVVGKLAVLVDSSKIGERAGMLFSQAGQIDVVITGKQADAAILKQ
LEDQGVSVIRV

Sequences:

>Translated_251_residues
MTEAQRHQILLDLLAQTGFVTVEQVMSRLGISPATARRDINKLDESGKLKKVRNGAEAISEQRPRWTPMNIHQAQNLDEK
VRIARAASQLIAPGESIVINCGSTAFLLGRELCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNRSHAITLSPHGSEN
SLYAGHWMFTSGKGLTAEGLYKTDMLTAMAEQKMLNVVGKLAVLVDSSKIGERAGMLFSQAGQIDVVITGKQADAAILKQ
LEDQGVSVIRV
>Mature_250_residues
TEAQRHQILLDLLAQTGFVTVEQVMSRLGISPATARRDINKLDESGKLKKVRNGAEAISEQRPRWTPMNIHQAQNLDEKV
RIARAASQLIAPGESIVINCGSTAFLLGRELCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNRSHAITLSPHGSENS
LYAGHWMFTSGKGLTAEGLYKTDMLTAMAEQKMLNVVGKLAVLVDSSKIGERAGMLFSQAGQIDVVITGKQADAAILKQL
EDQGVSVIRV

Specific function: Represses ulaG and the ulaABCDEF operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790635, Length=251, Percent_Identity=86.8525896414343, Blast_Score=462, Evalue=1e-131,
Organism=Escherichia coli, GI1789829, Length=255, Percent_Identity=25.8823529411765, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1789170, Length=229, Percent_Identity=28.3842794759825, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI226510968, Length=255, Percent_Identity=24.7058823529412, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789059, Length=260, Percent_Identity=26.5384615384615, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87082344, Length=259, Percent_Identity=25.8687258687259, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789519, Length=254, Percent_Identity=27.1653543307087, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787540, Length=254, Percent_Identity=27.1653543307087, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 27364; Mature: 27233

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAQRHQILLDLLAQTGFVTVEQVMSRLGISPATARRDINKLDESGKLKKVRNGAEAIS
CCCHHHHHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
EQRPRWTPMNIHQAQNLDEKVRIARAASQLIAPGESIVINCGSTAFLLGRELCGKPVQII
HCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHH
TNYLPLANYLIDQEHDSVIIMGGQYNRSHAITLSPHGSENSLYAGHWMFTSGKGLTAEGL
HHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCC
YKTDMLTAMAEQKMLNVVGKLAVLVDSSKIGERAGMLFSQAGQIDVVITGKQADAAILKQ
HHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
LEDQGVSVIRV
HHHCCCEEEEC
>Mature Secondary Structure 
TEAQRHQILLDLLAQTGFVTVEQVMSRLGISPATARRDINKLDESGKLKKVRNGAEAIS
CCHHHHHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
EQRPRWTPMNIHQAQNLDEKVRIARAASQLIAPGESIVINCGSTAFLLGRELCGKPVQII
HCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHH
TNYLPLANYLIDQEHDSVIIMGGQYNRSHAITLSPHGSENSLYAGHWMFTSGKGLTAEGL
HHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCC
YKTDMLTAMAEQKMLNVVGKLAVLVDSSKIGERAGMLFSQAGQIDVVITGKQADAAILKQ
HHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
LEDQGVSVIRV
HHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA