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The map label for this gene is cbpA [H]

Identifier: 238892598

GI number: 238892598

Start: 385273

End: 386190

Strand: Reverse

Name: cbpA [H]

Synonym: KP1_0376

Alternate gene names: 238892598

Gene position: 386190-385273 (Counterclockwise)

Preceding gene: 238892599

Following gene: 238892597

Centisome position: 7.36

GC content: 58.17

Gene sequence:

>918_bases
ATGGAATTGAAGGATTATTATGCCATTCTCGGGGTGCAACCAACCGACGATCTGAAAACCATCAAGACCGCCTACCGCCG
CCTGGCGCGCAAATATCACCCCGACGTCAGTAAAGAAAACGATGCCGAAGCCAAATTTAAGGATCTCGCCGAAGCCTGGG
AAGTCCTGAAAGATGAGCAACGGCGCGCCGAATACGATCAGCTCTGGCAGCATCGCAACGATCCCGGCTTCGGTCGCCAG
CGACAGACCCACGAGCAGAGCTACAGTCAGCAAGATTTCGACGACATCTTCTCCTCCATGTTTGGCCAGCAGGCGCATCA
GCGTCGTCGTCAACACGCGGCGCGCGGCCACGATCTGGAGATCGAAGTGGCGGTGTTCCTTGAAGAGACGCTGGCCGAGC
AGACGCGCACCATCAGCTATAACCTGCCGGTGTACAACGTGTTTGGCATGATCGAAAGCGAAACGCCGAAAACGCTGAAT
GTGAAGATCCCCGCCGGGGTAGTCGATGGTCAGCGTATCCGCCTGAAAGGCCAGGGGACGCCGGGGGAGAATGGCGGCCC
GAACGGCGATCTGTGGCTGGTTATCCACATCGCCCCGCATCCGCTATTCGATATTGTCGGTCATAACCTGGAGATCGTCC
TGCCGCTGGCGCCATGGGAGGCCGCGCTGGGCGCGAAAGTGACGGTGCCCACCCTGAAAGAGAGCATTCTGCTGACGGTG
CCGCCGGGCAGTCAGGCAGGGCAGCGACTGCGTATCAAAGGGAAAGGGCTCGTGAGCAAAACCCACACCGGCGATTTGTT
TGCCGTTATTAAAATAGTGATGCCGCCAAAACCAGATGAAAAAGCGCGTGAGCTCTGGCAACAATTGGCCGCCGCCGAAG
CCAGCTTCGATCCGCGTAAGACATGGGGGAAAGCCTGA

Upstream 100 bases:

>100_bases
ACTTTTCTTCCCCGTCAGGGCGCATTTGCCCTACGCTTTATACTGACGCCTGTTCCAGGGAATATGTAACCACCGCACTG
AGCATAGATGAGATAAAATC

Downstream 100 bases:

>100_bases
TGGCTACAGTAACAGTGACGTTTACCATTACCGAATTGTGCCTGCGTACCGGGGTGTCGGAAGAGGAGCTGACGGAGATC
GTCGGCTTAGGGATGATTGA

Product: curved DNA-binding protein CbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQ
RQTHEQSYSQQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLN
VKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTV
PPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPPKPDEKARELWQQLAAAEASFDPRKTWGKA

Sequences:

>Translated_305_residues
MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQ
RQTHEQSYSQQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLN
VKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTV
PPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPPKPDEKARELWQQLAAAEASFDPRKTWGKA
>Mature_305_residues
MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQ
RQTHEQSYSQQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLN
VKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTV
PPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPPKPDEKARELWQQLAAAEASFDPRKTWGKA

Specific function: DNA-binding protein that preferentially recognizes a curved DNA sequence. It is probably a functional analog of DnaJ; displays overlapping activities with DnaJ, but functions under different conditions, probably acting as a molecular chaperone in an adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI6631085, Length=331, Percent_Identity=27.7945619335347, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI5453690, Length=340, Percent_Identity=27.0588235294118, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI7706495, Length=332, Percent_Identity=28.6144578313253, Blast_Score=95, Evalue=7e-20,
Organism=Homo sapiens, GI39204547, Length=316, Percent_Identity=26.5822784810127, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI9558755, Length=104, Percent_Identity=46.1538461538462, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI205360840, Length=101, Percent_Identity=41.5841584158416, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI205360838, Length=101, Percent_Identity=41.5841584158416, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI56549115, Length=67, Percent_Identity=52.2388059701493, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI201862518, Length=64, Percent_Identity=54.6875, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI201862587, Length=64, Percent_Identity=54.6875, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI23503241, Length=105, Percent_Identity=38.0952380952381, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI17388799, Length=111, Percent_Identity=38.7387387387387, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI4885495, Length=111, Percent_Identity=38.7387387387387, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI194328758, Length=252, Percent_Identity=28.968253968254, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI194328760, Length=252, Percent_Identity=28.968253968254, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI47777312, Length=107, Percent_Identity=39.2523364485981, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI4504511, Length=136, Percent_Identity=33.8235294117647, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1787235, Length=306, Percent_Identity=81.6993464052288, Blast_Score=520, Evalue=1e-149,
Organism=Escherichia coli, GI1786197, Length=348, Percent_Identity=35.632183908046, Blast_Score=184, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17553096, Length=355, Percent_Identity=24.5070422535211, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17553098, Length=358, Percent_Identity=24.3016759776536, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17534355, Length=329, Percent_Identity=28.8753799392097, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI212645553, Length=292, Percent_Identity=27.3972602739726, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI86563276, Length=109, Percent_Identity=37.6146788990826, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6324265, Length=255, Percent_Identity=28.2352941176471, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI19920464, Length=323, Percent_Identity=26.625386996904, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24658562, Length=341, Percent_Identity=28.7390029325513, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24658555, Length=341, Percent_Identity=28.7390029325513, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI18858081, Length=347, Percent_Identity=27.6657060518732, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI85726398, Length=349, Percent_Identity=26.647564469914, Blast_Score=88, Evalue=9e-18,
Organism=Drosophila melanogaster, GI45549272, Length=74, Percent_Identity=54.0540540540541, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI45552813, Length=78, Percent_Identity=53.8461538461538, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI45552811, Length=78, Percent_Identity=53.8461538461538, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24654066, Length=99, Percent_Identity=39.3939393939394, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24654070, Length=99, Percent_Identity=39.3939393939394, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24654068, Length=99, Percent_Identity=39.3939393939394, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24654072, Length=99, Percent_Identity=39.3939393939394, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 34428; Mature: 34428

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQ
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RRAEYDQLWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMFGQQAHQRRRQHAARGHDLE
HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE
IEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGT
EEEHHHHHHHHHHHHHEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCC
PGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTV
CCCCCCCCCCEEEEEEECCCCHHHHHCCCEEEEEEECCCHHHCCCEEECCCCCCCEEEEE
PPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPPKPDEKARELWQQLAAAEASFDPRK
CCCCCCCCEEEEECCCCEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHH
TWGKA
HCCCC
>Mature Secondary Structure
MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQ
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RRAEYDQLWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMFGQQAHQRRRQHAARGHDLE
HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE
IEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGT
EEEHHHHHHHHHHHHHEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCC
PGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTV
CCCCCCCCCCEEEEEEECCCCHHHHHCCCEEEEEEECCCHHHCCCEEECCCCCCCEEEEE
PPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPPKPDEKARELWQQLAAAEASFDPRK
CCCCCCCCEEEEECCCCEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHH
TWGKA
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA